Wall clock time and date at job start Mon Mar 8 2021 09:02:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42895 * 1 3 3 C 1.42899 * 114.00165 * 2 1 4 4 C 1.52997 * 112.90446 * 293.95357 * 3 2 1 5 5 F 1.39903 * 109.47607 * 195.89627 * 4 3 2 6 6 F 1.39907 * 109.47149 * 315.89480 * 4 3 2 7 7 F 1.39899 * 109.47689 * 75.89274 * 4 3 2 8 8 C 1.54045 * 113.61458 * 162.69514 * 3 2 1 9 9 C 1.53775 * 86.98786 * 270.87863 * 8 3 2 10 10 H 1.09002 * 113.61792 * 219.98111 * 9 8 3 11 11 N 1.46505 * 113.61444 * 89.15980 * 9 8 3 12 12 C 1.38999 * 119.99961 * 105.86113 * 11 9 8 13 13 N 1.32397 * 119.70757 * 180.02562 * 12 11 9 14 14 C 1.31968 * 121.62531 * 180.02562 * 13 12 11 15 15 C 1.38030 * 120.85836 * 359.97438 * 14 13 12 16 16 C 1.50689 * 120.33829 * 180.02562 * 15 14 13 17 17 O 1.42905 * 109.46969 * 245.00244 * 16 15 14 18 18 Si 1.86308 * 109.47230 * 5.00095 * 16 15 14 19 19 C 1.38888 * 119.32407 * 0.27846 * 15 14 13 20 20 C 1.38302 * 118.50622 * 359.45770 * 19 15 14 21 21 C 1.53777 * 87.17427 * 334.57312 * 9 8 3 22 22 H 1.09003 * 109.47489 * 184.84596 * 1 2 3 23 23 H 1.09007 * 109.47549 * 304.84669 * 1 2 3 24 24 H 1.09006 * 109.47018 * 64.84502 * 1 2 3 25 25 H 1.09006 * 113.61491 * 156.37834 * 8 3 2 26 26 H 1.08994 * 113.69738 * 25.39973 * 8 3 2 27 27 H 0.97000 * 120.00042 * 285.86806 * 11 9 8 28 28 H 1.08004 * 119.57619 * 180.02562 * 14 13 12 29 29 H 1.09000 * 109.47559 * 124.99897 * 16 15 14 30 30 H 0.96695 * 114.00193 * 60.00220 * 17 16 15 31 31 H 1.48500 * 109.99926 * 180.02562 * 18 16 15 32 32 H 1.48505 * 109.99621 * 301.31717 * 18 16 15 33 33 H 1.07993 * 120.74408 * 179.70072 * 19 15 14 34 34 H 1.07998 * 120.44700 * 180.28239 * 20 19 15 35 35 H 1.08997 * 113.62157 * 140.01816 * 21 9 8 36 36 H 1.09003 * 113.61539 * 270.92613 * 21 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 6 1.7297 2.0821 -1.2880 5 9 2.6042 3.1706 -1.3761 6 9 1.9190 1.2415 -2.3902 7 9 0.4094 2.5446 -1.2756 8 6 3.4923 1.3210 0.4198 9 6 2.9967 1.4826 1.8666 10 1 3.5926 2.1785 2.4571 11 7 2.7633 0.2093 2.5526 12 6 3.6553 -0.2307 3.5236 13 7 3.4390 -1.3825 4.1396 14 6 4.2606 -1.8361 5.0674 15 6 5.3833 -1.1198 5.4303 16 6 6.3139 -1.6490 6.4908 17 8 6.2915 -0.7768 7.6225 18 14 5.7619 -3.3516 7.0080 19 6 5.6437 0.0962 4.8118 20 6 4.7678 0.5430 3.8393 21 6 1.7209 2.1086 1.2791 22 1 -0.3634 -1.0240 0.0868 23 1 -0.3634 0.5872 0.8434 24 1 -0.3633 0.4369 -0.9303 25 1 4.0425 2.1853 0.0477 26 1 4.0090 0.3787 0.2379 27 1 1.9863 -0.3267 2.3292 28 1 4.0523 -2.7803 5.5484 29 1 7.3271 -1.7011 6.0921 30 1 5.4194 -0.6827 8.0294 31 1 6.6713 -3.8844 8.0541 32 1 4.3704 -3.2994 7.5239 33 1 6.5128 0.6778 5.0814 34 1 4.9425 1.4819 3.3350 35 1 0.8085 1.8018 1.7903 36 1 1.7876 3.1879 1.1414 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_17312454_13915762.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:02:04 Heat of formation + Delta-G solvation = -136.771252 kcal Electronic energy + Delta-G solvation = -25755.023270 eV Core-core repulsion = 21406.875915 eV Total energy + Delta-G solvation = -4348.147356 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 305.103 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -51.24808 -48.77967 -48.72558 -41.77594 -40.92578 -38.17038 -37.40313 -35.02910 -33.36388 -31.26594 -28.96068 -28.09018 -26.79706 -26.31091 -24.91403 -23.87973 -22.58145 -20.91507 -19.87387 -19.53982 -19.36245 -18.56331 -18.48664 -17.51778 -17.15884 -16.51368 -16.46558 -16.22171 -15.96579 -15.73418 -15.61459 -15.58325 -15.38816 -15.22562 -15.13401 -14.91191 -14.88661 -14.38559 -14.20328 -13.98598 -13.76117 -13.49142 -13.21297 -13.16628 -12.70604 -12.48112 -12.23406 -12.01271 -11.69981 -11.26167 -10.90382 -10.73060 -10.52148 -10.36119 -8.71471 -4.89542 0.24664 0.43449 1.35429 1.53526 1.60962 1.92406 1.97613 2.18235 2.56797 2.62801 2.82684 2.85824 3.29954 3.41621 3.48339 3.55093 3.63097 3.80816 4.00016 4.07967 4.12818 4.23070 4.28748 4.39775 4.46045 4.47871 4.59677 4.65041 4.70126 4.76205 4.81032 4.83287 5.04874 5.34498 5.53753 5.71462 6.04147 6.52140 6.54100 7.16487 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.006 3.994 2 O -0.346 6.346 3 C 0.036 3.964 4 C 0.433 3.567 5 F -0.174 7.174 6 F -0.190 7.190 7 F -0.186 7.186 8 C -0.134 4.134 9 C 0.146 3.854 10 H 0.134 0.866 11 N -0.700 5.700 12 C 0.398 3.602 13 N -0.566 5.566 14 C 0.143 3.857 15 C -0.232 4.232 16 C -0.061 4.061 17 O -0.549 6.549 18 Si 0.752 3.248 19 C -0.011 4.011 20 C -0.238 4.238 21 C -0.152 4.152 22 H 0.111 0.889 23 H 0.068 0.932 24 H 0.044 0.956 25 H 0.138 0.862 26 H 0.089 0.911 27 H 0.407 0.593 28 H 0.163 0.837 29 H 0.126 0.874 30 H 0.384 0.616 31 H -0.301 1.301 32 H -0.284 1.284 33 H 0.148 0.852 34 H 0.157 0.843 35 H 0.102 0.898 36 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.049 1.877 0.035 1.878 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.090 4.090 2 O -0.263 6.263 3 C -0.006 4.006 4 C 0.378 3.622 5 F -0.155 7.155 6 F -0.171 7.171 7 F -0.167 7.167 8 C -0.172 4.172 9 C 0.039 3.961 10 H 0.152 0.848 11 N -0.332 5.332 12 C 0.162 3.838 13 N -0.283 5.283 14 C -0.014 4.014 15 C -0.237 4.237 16 C -0.171 4.171 17 O -0.357 6.357 18 Si 0.659 3.341 19 C -0.037 4.037 20 C -0.262 4.262 21 C -0.190 4.190 22 H 0.129 0.871 23 H 0.087 0.913 24 H 0.063 0.937 25 H 0.156 0.844 26 H 0.107 0.893 27 H 0.244 0.756 28 H 0.180 0.820 29 H 0.144 0.856 30 H 0.234 0.766 31 H -0.229 1.229 32 H -0.211 1.211 33 H 0.166 0.834 34 H 0.175 0.825 35 H 0.121 0.879 36 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -0.308 0.958 0.191 1.025 hybrid contribution -0.601 1.230 0.203 1.384 sum -0.909 2.188 0.394 2.402 Atomic orbital electron populations 1.23259 0.78865 1.05218 1.01614 1.88102 1.21852 1.22535 1.93848 1.24219 1.00726 0.86166 0.89528 1.21517 0.74123 0.78725 0.87809 1.93175 1.69246 1.56476 1.96636 1.93190 1.94852 1.71385 1.57680 1.93184 1.36960 1.89710 1.96861 1.23942 0.90664 1.06116 0.96527 1.21703 0.96998 0.85339 0.92016 0.84818 1.44247 1.27248 1.22701 1.38986 1.18599 0.88525 0.88997 0.87682 1.67121 1.33499 1.15030 1.12684 1.22458 0.89078 0.98274 0.91556 1.20956 0.99819 0.98981 1.03977 1.24855 1.03403 1.03198 0.85661 1.86567 1.36808 1.66959 1.45318 0.94215 0.76192 0.77716 0.86017 1.21436 0.97632 0.93605 0.91021 1.21733 0.96733 1.03629 1.04143 1.24039 1.00445 1.02207 0.92337 0.87093 0.91301 0.93749 0.84417 0.89280 0.75607 0.82009 0.85603 0.76645 1.22915 1.21072 0.83397 0.82511 0.87944 0.84586 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.02 10.30 113.37 1.17 1.15 16 2 O -0.35 0.07 9.09 -148.98 -1.35 -1.28 16 3 C 0.04 -0.11 0.85 -10.18 -0.01 -0.12 16 4 C 0.43 0.31 2.53 71.98 0.18 0.49 16 5 F -0.17 0.02 15.81 44.97 0.71 0.73 16 6 F -0.19 -1.04 17.11 44.97 0.77 -0.27 16 7 F -0.19 -0.30 15.40 44.97 0.69 0.39 16 8 C -0.13 0.76 7.15 31.21 0.22 0.99 16 9 C 0.15 -1.05 4.07 45.51 0.19 -0.86 16 10 H 0.13 -1.48 6.17 -2.39 -0.01 -1.50 16 11 N -0.70 1.41 5.31 -322.05 -1.71 -0.30 16 12 C 0.40 0.63 7.65 133.07 1.02 1.65 16 13 N -0.57 -2.81 10.39 -193.26 -2.01 -4.82 16 14 C 0.14 0.27 9.84 84.62 0.83 1.11 16 15 C -0.23 0.03 5.36 -19.76 -0.11 -0.08 16 16 C -0.06 0.08 2.82 71.23 0.20 0.28 16 17 O -0.55 -0.84 12.84 -148.98 -1.91 -2.75 16 18 Si 0.75 -1.28 29.91 68.60 2.05 0.77 16 19 C -0.01 0.01 9.83 22.44 0.22 0.23 16 20 C -0.24 0.41 9.28 22.50 0.21 0.62 16 21 C -0.15 1.20 6.65 31.12 0.21 1.40 16 22 H 0.11 -0.61 8.14 -2.39 -0.02 -0.63 16 23 H 0.07 -0.45 6.55 -2.38 -0.02 -0.46 16 24 H 0.04 -0.07 6.69 -2.38 -0.02 -0.09 16 25 H 0.14 -1.24 7.03 -2.38 -0.02 -1.26 16 26 H 0.09 -0.23 8.14 -2.39 -0.02 -0.25 16 27 H 0.41 -0.23 7.75 -92.71 -0.72 -0.95 16 28 H 0.16 -0.19 4.85 -2.91 -0.01 -0.21 16 29 H 0.13 -0.42 7.96 -2.39 -0.02 -0.44 16 30 H 0.38 -1.35 8.70 -74.06 -0.64 -2.00 16 31 H -0.30 -1.77 7.11 99.48 0.71 -1.06 16 32 H -0.28 -0.67 7.01 99.48 0.70 0.03 16 33 H 0.15 -0.58 8.06 -2.91 -0.02 -0.60 16 34 H 0.16 -1.12 6.06 -2.91 -0.02 -1.14 16 35 H 0.10 -0.84 6.67 -2.39 -0.02 -0.85 16 36 H 0.14 -1.49 8.04 -2.39 -0.02 -1.51 16 Total: 0.00 -14.98 307.11 1.40 -13.58 By element: Atomic # 1 Polarization: -12.74 SS G_CDS: -0.17 Total: -12.91 kcal Atomic # 6 Polarization: 2.54 SS G_CDS: 4.33 Total: 6.87 kcal Atomic # 7 Polarization: -1.39 SS G_CDS: -3.72 Total: -5.11 kcal Atomic # 8 Polarization: -0.77 SS G_CDS: -3.27 Total: -4.03 kcal Atomic # 9 Polarization: -1.33 SS G_CDS: 2.17 Total: 0.84 kcal Atomic # 14 Polarization: -1.28 SS G_CDS: 2.05 Total: 0.77 kcal Total: -14.98 1.40 -13.58 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17312454_13915762.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -123.193 kcal (2) G-P(sol) polarization free energy of solvation -14.978 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -138.171 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.400 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -13.578 kcal (6) G-S(sol) free energy of system = (1) + (5) -136.771 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds