Wall clock time and date at job start Mon Mar 8 2021 09:02:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.42891 * 114.00274 * 2 1 4 4 C 1.53001 * 112.85136 * 294.00624 * 3 2 1 5 5 F 1.39899 * 109.47279 * 195.87975 * 4 3 2 6 6 F 1.39899 * 109.47049 * 315.88446 * 4 3 2 7 7 F 1.39908 * 109.46699 * 75.88586 * 4 3 2 8 8 C 1.53784 * 113.69349 * 162.73706 * 3 2 1 9 9 C 1.53778 * 87.08143 * 270.87610 * 8 3 2 10 10 H 1.09005 * 113.61374 * 220.01512 * 9 8 3 11 11 N 1.46498 * 113.61815 * 89.11678 * 9 8 3 12 12 C 1.38612 * 120.00278 * 107.49959 * 11 9 8 13 13 N 1.29682 * 124.94789 * 0.02562 * 12 11 9 14 14 C 1.32125 * 116.86774 * 179.97438 * 13 12 11 15 15 C 1.33331 * 114.57579 * 0.02562 * 14 13 12 16 16 C 1.50694 * 125.94860 * 180.02562 * 15 14 13 17 17 O 1.42899 * 109.47742 * 64.99514 * 16 15 14 18 18 Si 1.86305 * 109.47098 * 184.99437 * 16 15 14 19 19 S 1.70966 * 124.94761 * 179.72532 * 12 11 9 20 20 C 1.53777 * 87.08288 * 334.56524 * 9 8 3 21 21 H 1.08999 * 109.46850 * 64.84649 * 1 2 3 22 22 H 1.09004 * 109.47340 * 184.84248 * 1 2 3 23 23 H 1.09000 * 109.47453 * 304.84561 * 1 2 3 24 24 H 1.09002 * 113.61370 * 156.32468 * 8 3 2 25 25 H 1.09002 * 113.61229 * 25.42502 * 8 3 2 26 26 H 0.97007 * 119.99645 * 287.50662 * 11 9 8 27 27 H 1.07997 * 122.71074 * 179.97438 * 14 13 12 28 28 H 1.08996 * 109.47305 * 304.99011 * 16 15 14 29 29 H 0.96694 * 114.00483 * 180.02562 * 17 16 15 30 30 H 1.48501 * 110.00269 * 178.67674 * 18 16 15 31 31 H 1.48498 * 109.99773 * 299.99830 * 18 16 15 32 32 H 1.08996 * 113.61575 * 139.98184 * 20 9 8 33 33 H 1.08998 * 113.61670 * 270.88514 * 20 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 6 1.7279 2.0815 -1.2880 5 9 2.6017 3.1704 -1.3773 6 9 1.9164 1.2405 -2.3900 7 9 0.4073 2.5432 -1.2741 8 6 3.4901 1.3229 0.4179 9 6 2.9979 1.4840 1.8659 10 1 3.5942 2.1812 2.4546 11 7 2.7666 0.2107 2.5523 12 6 3.6400 -0.2117 3.5423 13 7 4.6883 0.4420 3.9365 14 6 5.4109 -0.1101 4.8950 15 6 4.9516 -1.2840 5.3294 16 6 5.5723 -2.1320 6.4095 17 8 5.5059 -1.4383 7.6571 18 14 4.6454 -3.7424 6.5443 19 16 3.4880 -1.6669 4.4267 20 6 1.7210 2.1085 1.2792 21 1 -0.3633 0.4368 -0.9302 22 1 -0.3634 -1.0240 0.0868 23 1 -0.3634 0.5872 0.8434 24 1 4.0390 2.1874 0.0445 25 1 4.0067 0.3807 0.2346 26 1 2.0022 -0.3370 2.3139 27 1 6.3020 0.3517 5.2937 28 1 6.6143 -2.3324 6.1602 29 1 5.8884 -1.9261 8.3992 30 1 5.2673 -4.6010 7.5841 31 1 3.2232 -3.4829 6.8838 32 1 0.8093 1.8006 1.7912 33 1 1.7862 3.1877 1.1413 There are 53 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 53 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_17312454_15704118.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:02:07 Heat of formation + Delta-G solvation = -128.683462 kcal Electronic energy + Delta-G solvation = -24250.894142 eV Core-core repulsion = 19992.249746 eV Total energy + Delta-G solvation = -4258.644396 eV No. of doubly occupied orbitals = 53 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 311.059 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -51.24890 -48.78196 -48.72202 -41.59182 -40.47024 -38.05209 -37.44340 -34.97264 -31.42548 -29.11321 -28.09092 -26.82946 -26.51393 -24.92437 -23.71457 -21.62271 -20.54788 -19.90907 -19.53622 -19.25999 -19.15848 -18.56205 -17.56368 -17.20439 -16.62306 -16.26864 -16.04766 -15.85222 -15.66013 -15.62165 -15.59064 -15.47928 -15.16479 -14.93592 -14.89085 -14.61101 -14.29327 -14.00936 -13.85091 -13.39568 -13.22453 -12.88766 -12.67730 -12.47075 -12.36892 -12.29281 -11.73971 -11.31111 -10.88967 -10.71707 -10.28428 -10.21526 -8.76557 -5.02245 -0.08642 0.01056 0.66318 1.24986 1.52787 1.53641 1.89023 1.94537 1.96725 2.20899 2.55263 2.61453 2.85191 3.27976 3.40890 3.44666 3.53674 3.64614 3.96993 4.15162 4.27183 4.32827 4.44759 4.46695 4.48995 4.61437 4.66909 4.73889 4.77110 4.81718 5.11565 5.66318 5.83756 6.11460 6.60630 6.98043 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.002 3.998 2 O -0.344 6.344 3 C 0.041 3.959 4 C 0.434 3.566 5 F -0.176 7.176 6 F -0.188 7.188 7 F -0.184 7.184 8 C -0.130 4.130 9 C 0.152 3.848 10 H 0.117 0.883 11 N -0.665 5.665 12 C 0.318 3.682 13 N -0.570 5.570 14 C 0.104 3.896 15 C -0.270 4.270 16 C -0.025 4.025 17 O -0.556 6.556 18 Si 0.713 3.287 19 S 0.112 5.888 20 C -0.151 4.151 21 H 0.043 0.957 22 H 0.117 0.883 23 H 0.070 0.930 24 H 0.131 0.869 25 H 0.090 0.910 26 H 0.424 0.576 27 H 0.183 0.817 28 H 0.108 0.892 29 H 0.397 0.603 30 H -0.256 1.256 31 H -0.283 1.283 32 H 0.109 0.891 33 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.433 -2.377 0.749 2.529 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.093 4.093 2 O -0.262 6.262 3 C -0.002 4.002 4 C 0.379 3.621 5 F -0.157 7.157 6 F -0.169 7.169 7 F -0.166 7.166 8 C -0.169 4.169 9 C 0.044 3.956 10 H 0.135 0.865 11 N -0.305 5.305 12 C -0.052 4.052 13 N -0.296 5.296 14 C -0.047 4.047 15 C -0.392 4.392 16 C -0.137 4.137 17 O -0.367 6.367 18 Si 0.616 3.384 19 S 0.361 5.639 20 C -0.189 4.189 21 H 0.062 0.938 22 H 0.135 0.865 23 H 0.089 0.911 24 H 0.149 0.851 25 H 0.109 0.891 26 H 0.264 0.736 27 H 0.200 0.800 28 H 0.126 0.874 29 H 0.248 0.752 30 H -0.181 1.181 31 H -0.209 1.209 32 H 0.127 0.873 33 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges -1.659 -2.805 0.544 3.304 hybrid contribution 0.479 0.962 0.713 1.290 sum -1.180 -1.843 1.257 2.524 Atomic orbital electron populations 1.23330 0.78602 1.05580 1.01796 1.88076 1.22070 1.22176 1.93869 1.24100 1.00283 0.86277 0.89496 1.21463 0.74150 0.78698 0.87769 1.93177 1.69383 1.56545 1.96627 1.93191 1.94859 1.71278 1.57576 1.93189 1.36792 1.89727 1.96854 1.23798 0.90921 1.05958 0.96257 1.21593 0.96802 0.85255 0.91983 0.86510 1.43728 1.27585 1.22868 1.36352 1.23825 0.92831 0.94332 0.94256 1.66473 1.07994 1.35603 1.19517 1.21494 0.99795 0.91556 0.91835 1.24612 1.01906 1.03788 1.08905 1.23893 1.05039 1.02174 0.82575 1.86569 1.84725 1.46992 1.18365 0.94460 0.77465 0.76209 0.90301 1.83930 1.26223 1.20838 1.32883 1.24051 1.00301 1.02177 0.92418 0.93782 0.86474 0.91131 0.85121 0.89123 0.73583 0.80026 0.87423 0.75211 1.18072 1.20928 0.87279 0.84997 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.00 -0.01 10.30 113.37 1.17 1.16 16 2 O -0.34 0.59 9.07 -148.98 -1.35 -0.76 16 3 C 0.04 -0.10 0.84 -10.26 -0.01 -0.11 16 4 C 0.43 0.58 2.52 71.98 0.18 0.76 16 5 F -0.18 -0.28 15.81 44.97 0.71 0.43 16 6 F -0.19 -1.03 17.10 44.97 0.77 -0.26 16 7 F -0.18 -0.33 15.39 44.97 0.69 0.36 16 8 C -0.13 0.36 7.13 31.12 0.22 0.58 16 9 C 0.15 -0.47 4.44 45.52 0.20 -0.27 16 10 H 0.12 -0.17 7.67 -2.38 -0.02 -0.19 16 11 N -0.67 0.98 5.31 -327.91 -1.74 -0.76 16 12 C 0.32 0.96 8.09 179.32 1.45 2.41 16 13 N -0.57 -3.50 9.83 -202.02 -1.99 -5.49 16 14 C 0.10 0.50 11.24 83.54 0.94 1.44 16 15 C -0.27 -0.85 5.76 24.57 0.14 -0.71 16 16 C -0.02 0.02 2.98 71.23 0.21 0.23 16 17 O -0.56 -0.91 12.86 -148.98 -1.92 -2.83 16 18 Si 0.71 -0.98 31.07 68.60 2.13 1.15 16 19 S 0.11 0.18 20.59 -56.49 -1.16 -0.98 16 20 C -0.15 0.92 6.66 31.12 0.21 1.13 16 21 H 0.04 -0.13 6.69 -2.39 -0.02 -0.15 16 22 H 0.12 -0.99 8.14 -2.38 -0.02 -1.01 16 23 H 0.07 -0.60 6.55 -2.39 -0.02 -0.62 16 24 H 0.13 -0.60 7.02 -2.39 -0.02 -0.62 16 25 H 0.09 -0.05 8.14 -2.39 -0.02 -0.07 16 26 H 0.42 -1.76 7.72 -92.70 -0.72 -2.47 16 27 H 0.18 0.36 8.06 -2.91 -0.02 0.34 16 28 H 0.11 -0.57 7.96 -2.39 -0.02 -0.59 16 29 H 0.40 -2.72 8.74 -74.06 -0.65 -3.37 16 30 H -0.26 -0.26 7.11 99.48 0.71 0.45 16 31 H -0.28 -1.66 7.11 99.48 0.71 -0.95 16 32 H 0.11 -0.89 6.67 -2.39 -0.02 -0.90 16 33 H 0.13 -1.08 8.04 -2.39 -0.02 -1.10 16 Total: 0.00 -14.48 302.59 0.73 -13.75 By element: Atomic # 1 Polarization: -11.11 SS G_CDS: -0.13 Total: -11.24 kcal Atomic # 6 Polarization: 1.90 SS G_CDS: 4.71 Total: 6.62 kcal Atomic # 7 Polarization: -2.52 SS G_CDS: -3.73 Total: -6.25 kcal Atomic # 8 Polarization: -0.32 SS G_CDS: -3.27 Total: -3.59 kcal Atomic # 9 Polarization: -1.64 SS G_CDS: 2.17 Total: 0.54 kcal Atomic # 14 Polarization: -0.98 SS G_CDS: 2.13 Total: 1.15 kcal Atomic # 16 Polarization: 0.18 SS G_CDS: -1.16 Total: -0.98 kcal Total: -14.48 0.73 -13.75 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17312454_15704118.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -114.930 kcal (2) G-P(sol) polarization free energy of solvation -14.482 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -129.412 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.729 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -13.753 kcal (6) G-S(sol) free energy of system = (1) + (5) -128.683 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds