Wall clock time and date at job start Mon Mar 8 2021 09:02:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.42896 * 114.00157 * 2 1 4 4 C 1.52997 * 112.85246 * 294.11835 * 3 2 1 5 5 F 1.39902 * 109.47271 * 195.88373 * 4 3 2 6 6 F 1.39911 * 109.46770 * 315.88235 * 4 3 2 7 7 F 1.39894 * 109.47222 * 75.87866 * 4 3 2 8 8 C 1.53782 * 113.61513 * 162.80957 * 3 2 1 9 9 C 1.54055 * 87.07741 * 270.88031 * 8 3 2 10 10 H 1.08999 * 113.69251 * 220.05164 * 9 8 3 11 11 N 1.46499 * 113.61302 * 89.07165 * 9 8 3 12 12 C 1.38616 * 119.99924 * 107.61597 * 11 9 8 13 13 N 1.29683 * 124.94513 * 179.72107 * 12 11 9 14 14 C 1.32127 * 116.86110 * 179.81993 * 13 12 11 15 15 C 1.50700 * 122.70960 * 180.23075 * 14 13 12 16 16 O 1.42901 * 109.46967 * 210.26270 * 15 14 13 17 17 Si 1.86299 * 109.47121 * 330.26052 * 15 14 13 18 18 C 1.33319 * 114.57948 * 0.46581 * 14 13 12 19 19 C 1.50702 * 125.95465 * 179.75386 * 18 14 13 20 20 S 1.70963 * 124.94737 * 0.02795 * 12 11 9 21 21 C 1.53779 * 86.98603 * 334.56739 * 9 8 3 22 22 H 1.09001 * 109.47211 * 183.22191 * 1 2 3 23 23 H 1.09000 * 109.47047 * 303.21786 * 1 2 3 24 24 H 1.09001 * 109.47169 * 63.21531 * 1 2 3 25 25 H 1.09004 * 113.61543 * 25.42937 * 8 3 2 26 26 H 1.08997 * 113.61788 * 156.25200 * 8 3 2 27 27 H 0.96995 * 120.00444 * 287.62132 * 11 9 8 28 28 H 1.08999 * 109.47709 * 90.26017 * 15 14 13 29 29 H 0.96704 * 114.00045 * 59.99308 * 16 15 14 30 30 H 1.48492 * 109.99958 * 58.68161 * 17 15 14 31 31 H 1.48502 * 110.00071 * 180.02562 * 17 15 14 32 32 H 1.08991 * 109.47553 * 180.02562 * 19 18 14 33 33 H 1.09002 * 109.47309 * 300.03256 * 19 18 14 34 34 H 1.09000 * 109.47060 * 60.02862 * 19 18 14 35 35 H 1.08992 * 113.61840 * 270.84046 * 21 9 8 36 36 H 1.09003 * 113.61270 * 140.01863 * 21 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 6 1.7256 2.0825 -1.2868 5 9 2.5993 3.1715 -1.3769 6 9 1.9123 1.2424 -2.3899 7 9 0.4051 2.5442 -1.2704 8 6 3.4905 1.3206 0.4164 9 6 2.9990 1.4813 1.8676 10 1 3.5954 2.1773 2.4575 11 7 2.7658 0.2075 2.5526 12 6 3.6379 -0.2166 3.5431 13 7 3.5208 -1.3209 4.2128 14 6 4.4480 -1.5697 5.1206 15 6 4.4433 -2.8149 5.9695 16 8 5.0421 -2.5306 7.2354 17 14 2.6883 -3.3846 6.2266 18 6 5.3853 -0.6278 5.2285 19 6 6.5536 -0.6469 6.1803 20 16 5.0202 0.6434 4.0647 21 6 1.7232 2.1076 1.2803 22 1 -0.3634 -1.0260 0.0578 23 1 -0.3633 0.5630 0.8597 24 1 -0.3633 0.4631 -0.9174 25 1 4.0058 0.3780 0.2318 26 1 4.0405 2.1840 0.0423 27 1 2.0011 -0.3391 2.3131 28 1 5.0099 -3.5991 5.4674 29 1 4.5889 -1.8403 7.7388 30 1 2.0442 -3.6530 4.9158 31 1 2.6699 -4.6116 7.0628 32 1 7.1497 0.2550 6.0421 33 1 6.1862 -0.6861 7.2058 34 1 7.1699 -1.5237 5.9815 35 1 1.7896 3.1868 1.1434 36 1 0.8109 1.8012 1.7922 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_17312454_15704122.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:02:10 Heat of formation + Delta-G solvation = -135.823542 kcal Electronic energy + Delta-G solvation = -26424.243250 eV Core-core repulsion = 22009.751618 eV Total energy + Delta-G solvation = -4414.491632 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 325.075 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -51.25998 -48.80939 -48.68733 -41.76495 -40.90607 -38.13451 -37.44866 -35.10100 -32.51246 -29.66580 -28.75324 -28.23425 -27.06875 -25.63286 -24.56681 -23.98157 -21.59012 -20.70771 -19.73379 -19.54763 -19.47725 -18.87292 -17.85000 -17.57223 -17.23340 -16.76431 -16.53392 -16.28390 -15.92114 -15.67445 -15.58844 -15.57461 -15.36611 -15.16823 -14.92469 -14.87619 -14.54666 -14.33711 -14.14738 -13.79847 -13.73958 -13.61762 -13.49208 -13.42822 -12.93124 -12.74116 -12.56910 -12.20198 -11.99175 -11.81411 -11.22275 -11.02566 -10.57659 -10.34115 -9.98223 -8.66933 -4.84668 0.00341 0.15733 0.75970 1.39153 1.43745 1.64035 1.87835 1.93822 1.94443 2.25923 2.39983 2.49392 2.64393 3.05594 3.21784 3.34795 3.38500 3.53780 3.75614 3.95423 4.05501 4.09213 4.14871 4.17575 4.27532 4.33750 4.34909 4.51063 4.55329 4.55983 4.80962 4.89110 5.06854 5.28911 5.44529 5.56272 6.23267 6.49910 6.95118 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.009 3.991 2 O -0.331 6.331 3 C 0.041 3.959 4 C 0.439 3.561 5 F -0.174 7.174 6 F -0.173 7.173 7 F -0.180 7.180 8 C -0.137 4.137 9 C 0.142 3.858 10 H 0.113 0.887 11 N -0.673 5.673 12 C 0.320 3.680 13 N -0.540 5.540 14 C 0.065 3.935 15 C -0.033 4.033 16 O -0.535 6.535 17 Si 0.716 3.284 18 C -0.235 4.235 19 C -0.060 4.060 20 S 0.101 5.899 21 C -0.158 4.158 22 H 0.104 0.896 23 H 0.056 0.944 24 H 0.055 0.945 25 H 0.103 0.897 26 H 0.126 0.874 27 H 0.417 0.583 28 H 0.120 0.880 29 H 0.378 0.622 30 H -0.252 1.252 31 H -0.262 1.262 32 H 0.058 0.942 33 H 0.083 0.917 34 H 0.075 0.925 35 H 0.123 0.877 36 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.080 4.354 2.302 5.042 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 O -0.249 6.249 3 C -0.001 4.001 4 C 0.384 3.616 5 F -0.155 7.155 6 F -0.154 7.154 7 F -0.162 7.162 8 C -0.176 4.176 9 C 0.035 3.965 10 H 0.131 0.869 11 N -0.314 5.314 12 C -0.051 4.051 13 N -0.266 5.266 14 C -0.065 4.065 15 C -0.146 4.146 16 O -0.340 6.340 17 Si 0.616 3.384 18 C -0.358 4.358 19 C -0.119 4.119 20 S 0.350 5.650 21 C -0.197 4.197 22 H 0.122 0.878 23 H 0.075 0.925 24 H 0.073 0.927 25 H 0.122 0.878 26 H 0.144 0.856 27 H 0.257 0.743 28 H 0.137 0.863 29 H 0.226 0.774 30 H -0.176 1.176 31 H -0.188 1.188 32 H 0.077 0.923 33 H 0.102 0.898 34 H 0.094 0.906 35 H 0.141 0.859 36 H 0.120 0.880 Dipole moment (debyes) X Y Z Total from point charges -1.116 3.846 1.484 4.270 hybrid contribution -0.211 -0.572 -0.671 0.907 sum -1.326 3.273 0.812 3.624 Atomic orbital electron populations 1.23187 0.79272 1.04592 1.01661 1.88122 1.21244 1.21663 1.93856 1.23937 0.99730 0.86426 0.90055 1.21089 0.74388 0.78690 0.87450 1.93185 1.69347 1.56411 1.96596 1.93233 1.94800 1.70872 1.56504 1.93198 1.36507 1.89652 1.96827 1.23888 0.91593 1.06437 0.95670 1.21696 0.97217 0.85019 0.92598 0.86932 1.43535 1.28801 1.22196 1.36907 1.23210 0.94598 0.93283 0.94056 1.65947 1.30108 1.18274 1.12293 1.20114 0.91117 0.98475 0.96828 1.24520 1.11269 0.94692 0.84135 1.86528 1.57513 1.61359 1.28600 0.94127 0.77056 0.83345 0.83849 1.25161 1.05295 0.98095 1.07231 1.20161 0.92900 1.02047 0.96830 1.83941 1.21890 1.24664 1.34511 1.23996 1.00105 1.01781 0.93792 0.87793 0.92543 0.92659 0.87837 0.85559 0.74259 0.86275 0.77382 1.17612 1.18754 0.92320 0.89832 0.90648 0.85870 0.87978 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.02 10.33 101.05 1.04 1.03 16 2 O -0.33 0.15 9.06 -35.23 -0.32 -0.17 16 3 C 0.04 -0.07 0.84 -89.80 -0.08 -0.14 16 4 C 0.44 0.02 2.52 37.16 0.09 0.11 16 5 F -0.17 0.02 15.82 2.25 0.04 0.06 16 6 F -0.17 -0.37 17.10 2.25 0.04 -0.33 16 7 F -0.18 -0.07 15.35 2.25 0.03 -0.04 16 8 C -0.14 0.35 7.15 -25.77 -0.18 0.16 16 9 C 0.14 -0.42 4.33 -66.98 -0.29 -0.71 16 10 H 0.11 -0.45 7.06 -51.93 -0.37 -0.82 16 11 N -0.67 0.54 5.31 -54.85 -0.29 0.25 16 12 C 0.32 0.37 8.24 -87.68 -0.72 -0.35 16 13 N -0.54 -1.54 8.94 -11.36 -0.10 -1.64 16 14 C 0.06 0.12 5.92 -84.18 -0.50 -0.37 16 15 C -0.03 -0.03 2.94 36.01 0.11 0.07 16 16 O -0.54 0.10 10.17 -35.23 -0.36 -0.26 16 17 Si 0.72 0.63 32.08 -169.99 -5.45 -4.82 16 18 C -0.24 -0.23 6.50 -36.03 -0.23 -0.47 16 19 C -0.06 0.03 8.91 36.01 0.32 0.35 16 20 S 0.10 -0.01 21.69 -107.50 -2.33 -2.34 16 21 C -0.16 0.59 6.66 -25.92 -0.17 0.42 16 22 H 0.10 -0.31 8.14 -51.93 -0.42 -0.74 16 23 H 0.06 -0.20 6.59 -51.93 -0.34 -0.54 16 24 H 0.05 -0.08 6.58 -51.93 -0.34 -0.42 16 25 H 0.10 -0.13 8.14 -51.93 -0.42 -0.56 16 26 H 0.13 -0.50 7.03 -51.93 -0.36 -0.86 16 27 H 0.42 -0.21 7.72 -40.82 -0.31 -0.52 16 28 H 0.12 0.18 7.96 -51.93 -0.41 -0.23 16 29 H 0.38 -1.40 8.13 45.56 0.37 -1.03 16 30 H -0.25 -1.11 7.11 56.52 0.40 -0.71 16 31 H -0.26 -0.87 7.11 56.52 0.40 -0.47 16 32 H 0.06 -0.07 8.14 -51.93 -0.42 -0.49 16 33 H 0.08 -0.14 6.39 -51.93 -0.33 -0.47 16 34 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 35 H 0.12 -0.62 8.04 -51.93 -0.42 -1.04 16 36 H 0.10 -0.43 6.68 -51.93 -0.35 -0.77 16 LS Contribution 318.81 15.07 4.80 4.80 Total: 0.00 -6.18 318.81 -8.31 -14.49 By element: Atomic # 1 Polarization: -6.34 SS G_CDS: -3.76 Total: -10.10 kcal Atomic # 6 Polarization: 0.71 SS G_CDS: -0.61 Total: 0.10 kcal Atomic # 7 Polarization: -0.99 SS G_CDS: -0.39 Total: -1.38 kcal Atomic # 8 Polarization: 0.25 SS G_CDS: -0.68 Total: -0.43 kcal Atomic # 9 Polarization: -0.42 SS G_CDS: 0.11 Total: -0.31 kcal Atomic # 14 Polarization: 0.63 SS G_CDS: -5.45 Total: -4.82 kcal Atomic # 16 Polarization: -0.01 SS G_CDS: -2.33 Total: -2.34 kcal Total LS contribution 4.80 Total: 4.80 kcal Total: -6.18 -8.31 -14.49 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17312454_15704122.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -121.334 kcal (2) G-P(sol) polarization free energy of solvation -6.175 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -127.510 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.314 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.489 kcal (6) G-S(sol) free energy of system = (1) + (5) -135.824 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds