Wall clock time and date at job start Mon Mar 8 2021 09:02:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.42896 * 114.00157 * 2 1 4 4 C 1.52997 * 112.85246 * 294.11835 * 3 2 1 5 5 F 1.39902 * 109.47271 * 195.88373 * 4 3 2 6 6 F 1.39911 * 109.46770 * 315.88235 * 4 3 2 7 7 F 1.39894 * 109.47222 * 75.87866 * 4 3 2 8 8 C 1.53782 * 113.61513 * 162.80957 * 3 2 1 9 9 C 1.54055 * 87.07741 * 270.88031 * 8 3 2 10 10 H 1.08999 * 113.69251 * 220.05164 * 9 8 3 11 11 N 1.46499 * 113.61302 * 89.07165 * 9 8 3 12 12 C 1.38616 * 119.99924 * 107.61597 * 11 9 8 13 13 N 1.29683 * 124.94513 * 179.72107 * 12 11 9 14 14 C 1.32127 * 116.86110 * 179.81993 * 13 12 11 15 15 C 1.50700 * 122.70960 * 180.23075 * 14 13 12 16 16 O 1.42901 * 109.46967 * 210.26270 * 15 14 13 17 17 Si 1.86299 * 109.47121 * 330.26052 * 15 14 13 18 18 C 1.33319 * 114.57948 * 0.46581 * 14 13 12 19 19 C 1.50702 * 125.95465 * 179.75386 * 18 14 13 20 20 S 1.70963 * 124.94737 * 0.02795 * 12 11 9 21 21 C 1.53779 * 86.98603 * 334.56739 * 9 8 3 22 22 H 1.09001 * 109.47211 * 183.22191 * 1 2 3 23 23 H 1.09000 * 109.47047 * 303.21786 * 1 2 3 24 24 H 1.09001 * 109.47169 * 63.21531 * 1 2 3 25 25 H 1.09004 * 113.61543 * 25.42937 * 8 3 2 26 26 H 1.08997 * 113.61788 * 156.25200 * 8 3 2 27 27 H 0.96995 * 120.00444 * 287.62132 * 11 9 8 28 28 H 1.08999 * 109.47709 * 90.26017 * 15 14 13 29 29 H 0.96704 * 114.00045 * 59.99308 * 16 15 14 30 30 H 1.48492 * 109.99958 * 58.68161 * 17 15 14 31 31 H 1.48502 * 110.00071 * 180.02562 * 17 15 14 32 32 H 1.08991 * 109.47553 * 180.02562 * 19 18 14 33 33 H 1.09002 * 109.47309 * 300.03256 * 19 18 14 34 34 H 1.09000 * 109.47060 * 60.02862 * 19 18 14 35 35 H 1.08992 * 113.61840 * 270.84046 * 21 9 8 36 36 H 1.09003 * 113.61270 * 140.01863 * 21 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 6 1.7256 2.0825 -1.2868 5 9 2.5993 3.1715 -1.3769 6 9 1.9123 1.2424 -2.3899 7 9 0.4051 2.5442 -1.2704 8 6 3.4905 1.3206 0.4164 9 6 2.9990 1.4813 1.8676 10 1 3.5954 2.1773 2.4575 11 7 2.7658 0.2075 2.5526 12 6 3.6379 -0.2166 3.5431 13 7 3.5208 -1.3209 4.2128 14 6 4.4480 -1.5697 5.1206 15 6 4.4433 -2.8149 5.9695 16 8 5.0421 -2.5306 7.2354 17 14 2.6883 -3.3846 6.2266 18 6 5.3853 -0.6278 5.2285 19 6 6.5536 -0.6469 6.1803 20 16 5.0202 0.6434 4.0647 21 6 1.7232 2.1076 1.2803 22 1 -0.3634 -1.0260 0.0578 23 1 -0.3633 0.5630 0.8597 24 1 -0.3633 0.4631 -0.9174 25 1 4.0058 0.3780 0.2318 26 1 4.0405 2.1840 0.0423 27 1 2.0011 -0.3391 2.3131 28 1 5.0099 -3.5991 5.4674 29 1 4.5889 -1.8403 7.7388 30 1 2.0442 -3.6530 4.9158 31 1 2.6699 -4.6116 7.0628 32 1 7.1497 0.2550 6.0421 33 1 6.1862 -0.6861 7.2058 34 1 7.1699 -1.5237 5.9815 35 1 1.7896 3.1868 1.1434 36 1 0.8109 1.8012 1.7922 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_17312454_15704122.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:02:09 Heat of formation + Delta-G solvation = -132.701567 kcal Electronic energy + Delta-G solvation = -26424.107871 eV Core-core repulsion = 22009.751618 eV Total energy + Delta-G solvation = -4414.356253 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 325.075 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -51.27236 -48.80066 -48.74898 -41.61427 -40.91809 -38.07162 -37.37869 -35.02269 -32.48091 -29.62559 -28.67296 -28.10097 -26.84969 -25.63078 -24.55194 -23.89548 -21.49052 -20.66763 -19.70108 -19.55881 -19.43112 -18.83441 -17.83377 -17.46609 -17.14731 -16.64494 -16.55211 -16.15535 -15.80492 -15.69834 -15.63121 -15.59991 -15.35732 -15.18486 -14.96619 -14.91271 -14.46435 -14.30868 -14.16193 -13.80698 -13.61094 -13.45649 -13.39629 -13.27392 -12.79140 -12.69238 -12.45194 -12.28553 -11.96503 -11.79949 -11.14040 -10.92264 -10.61442 -10.37377 -10.00010 -8.65186 -4.96594 -0.02056 0.16073 0.74055 1.30603 1.49803 1.71933 1.77754 1.84685 2.09264 2.12633 2.52791 2.58017 2.79094 3.23703 3.29247 3.38535 3.48357 3.56113 4.01803 4.16950 4.19712 4.23855 4.33834 4.36610 4.42135 4.47745 4.52045 4.61530 4.71057 4.76906 4.88534 4.91002 5.10961 5.36168 5.56133 5.71214 6.26803 6.68312 6.95200 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.005 3.995 2 O -0.348 6.348 3 C 0.036 3.964 4 C 0.435 3.565 5 F -0.173 7.173 6 F -0.190 7.190 7 F -0.184 7.184 8 C -0.135 4.135 9 C 0.141 3.859 10 H 0.129 0.871 11 N -0.671 5.671 12 C 0.308 3.692 13 N -0.572 5.572 14 C 0.050 3.950 15 C -0.029 4.029 16 O -0.539 6.539 17 Si 0.792 3.208 18 C -0.244 4.244 19 C -0.059 4.059 20 S 0.134 5.866 21 C -0.146 4.146 22 H 0.109 0.891 23 H 0.072 0.928 24 H 0.046 0.954 25 H 0.089 0.911 26 H 0.142 0.858 27 H 0.414 0.586 28 H 0.111 0.889 29 H 0.395 0.605 30 H -0.303 1.303 31 H -0.295 1.295 32 H 0.066 0.934 33 H 0.096 0.904 34 H 0.066 0.934 35 H 0.142 0.858 36 H 0.109 0.891 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.690 5.818 3.078 6.618 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.091 4.091 2 O -0.266 6.266 3 C -0.007 4.007 4 C 0.380 3.620 5 F -0.154 7.154 6 F -0.171 7.171 7 F -0.165 7.165 8 C -0.174 4.174 9 C 0.035 3.965 10 H 0.146 0.854 11 N -0.311 5.311 12 C -0.062 4.062 13 N -0.299 5.299 14 C -0.079 4.079 15 C -0.143 4.143 16 O -0.346 6.346 17 Si 0.698 3.302 18 C -0.367 4.367 19 C -0.118 4.118 20 S 0.384 5.616 21 C -0.184 4.184 22 H 0.127 0.873 23 H 0.091 0.909 24 H 0.065 0.935 25 H 0.107 0.893 26 H 0.160 0.840 27 H 0.254 0.746 28 H 0.128 0.872 29 H 0.245 0.755 30 H -0.231 1.231 31 H -0.223 1.223 32 H 0.085 0.915 33 H 0.114 0.886 34 H 0.085 0.915 35 H 0.160 0.840 36 H 0.127 0.873 Dipole moment (debyes) X Y Z Total from point charges -0.722 5.350 2.270 5.856 hybrid contribution -0.351 -1.026 -0.991 1.469 sum -1.074 4.324 1.280 4.635 Atomic orbital electron populations 1.23281 0.78668 1.05191 1.01914 1.88102 1.22058 1.22567 1.93885 1.24123 1.00397 0.86244 0.89891 1.21423 0.74238 0.78705 0.87620 1.93180 1.69272 1.56370 1.96611 1.93195 1.94894 1.71436 1.57583 1.93188 1.36787 1.89694 1.96831 1.23962 0.91110 1.06391 0.95978 1.21830 0.97966 0.84387 0.92320 0.85366 1.43704 1.28287 1.22755 1.36379 1.23457 0.95310 0.93282 0.94195 1.65938 1.31195 1.19477 1.13302 1.20190 0.91574 0.98972 0.97210 1.24410 1.10738 0.94498 0.84632 1.86495 1.57799 1.62200 1.28124 0.93259 0.75612 0.81375 0.79918 1.25430 1.05397 0.98317 1.07567 1.20197 0.92364 1.02027 0.97189 1.83730 1.20697 1.23565 1.33645 1.24033 0.99980 1.02469 0.91951 0.87312 0.90932 0.93535 0.89279 0.83992 0.74624 0.87176 0.75474 1.23074 1.22262 0.91500 0.88579 0.91485 0.84000 0.87270 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.00 -0.02 10.33 113.37 1.17 1.15 16 2 O -0.35 0.11 9.06 -148.98 -1.35 -1.24 16 3 C 0.04 -0.12 0.84 -10.27 -0.01 -0.13 16 4 C 0.43 0.10 2.52 71.98 0.18 0.28 16 5 F -0.17 0.11 15.82 44.97 0.71 0.82 16 6 F -0.19 -1.00 17.10 44.97 0.77 -0.23 16 7 F -0.18 -0.16 15.35 44.97 0.69 0.53 16 8 C -0.14 0.73 7.15 31.21 0.22 0.95 16 9 C 0.14 -0.97 4.33 45.61 0.20 -0.77 16 10 H 0.13 -1.26 7.06 -2.39 -0.02 -1.28 16 11 N -0.67 1.13 5.31 -327.46 -1.74 -0.60 16 12 C 0.31 0.72 8.24 179.32 1.48 2.19 16 13 N -0.57 -3.64 8.94 -189.86 -1.70 -5.33 16 14 C 0.05 0.21 5.92 41.40 0.25 0.45 16 15 C -0.03 -0.07 2.94 71.24 0.21 0.14 16 16 O -0.54 0.42 10.17 -148.98 -1.52 -1.10 16 17 Si 0.79 2.35 32.08 68.60 2.20 4.55 16 18 C -0.24 -0.38 6.50 24.57 0.16 -0.22 16 19 C -0.06 0.11 8.91 71.24 0.63 0.75 16 20 S 0.13 -0.13 21.69 -56.49 -1.23 -1.35 16 21 C -0.15 1.27 6.66 31.12 0.21 1.47 16 22 H 0.11 -0.57 8.14 -2.39 -0.02 -0.59 16 23 H 0.07 -0.54 6.59 -2.39 -0.02 -0.55 16 24 H 0.05 -0.10 6.58 -2.39 -0.02 -0.11 16 25 H 0.09 -0.18 8.14 -2.39 -0.02 -0.20 16 26 H 0.14 -1.25 7.03 -2.39 -0.02 -1.27 16 27 H 0.41 -0.24 7.72 -92.71 -0.72 -0.95 16 28 H 0.11 0.45 7.96 -2.39 -0.02 0.43 16 29 H 0.39 -3.32 8.13 -74.05 -0.60 -3.92 16 30 H -0.30 -3.48 7.11 99.48 0.71 -2.77 16 31 H -0.29 -2.39 7.11 99.48 0.71 -1.68 16 32 H 0.07 -0.24 8.14 -2.39 -0.02 -0.26 16 33 H 0.10 -0.45 6.39 -2.39 -0.02 -0.46 16 34 H 0.07 0.01 8.14 -2.39 -0.02 -0.01 16 35 H 0.14 -1.72 8.04 -2.39 -0.02 -1.74 16 36 H 0.11 -1.05 6.68 -2.39 -0.02 -1.07 16 Total: 0.00 -15.58 318.81 1.43 -14.15 By element: Atomic # 1 Polarization: -16.34 SS G_CDS: -0.12 Total: -16.46 kcal Atomic # 6 Polarization: 1.56 SS G_CDS: 4.70 Total: 6.26 kcal Atomic # 7 Polarization: -2.50 SS G_CDS: -3.44 Total: -5.94 kcal Atomic # 8 Polarization: 0.53 SS G_CDS: -2.87 Total: -2.34 kcal Atomic # 9 Polarization: -1.05 SS G_CDS: 2.17 Total: 1.13 kcal Atomic # 14 Polarization: 2.35 SS G_CDS: 2.20 Total: 4.55 kcal Atomic # 16 Polarization: -0.13 SS G_CDS: -1.23 Total: -1.35 kcal Total: -15.58 1.43 -14.15 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17312454_15704122.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -118.551 kcal (2) G-P(sol) polarization free energy of solvation -15.577 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -134.127 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.426 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.151 kcal (6) G-S(sol) free energy of system = (1) + (5) -132.702 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds