Wall clock time and date at job start Mon Mar 8 2021 09:02:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42894 * 114.00213 * 2 1 4 4 C 1.53009 * 112.85092 * 65.08054 * 3 2 1 5 5 F 1.39896 * 109.46971 * 54.18678 * 4 3 2 6 6 F 1.39894 * 109.47399 * 174.18784 * 4 3 2 7 7 F 1.39904 * 109.46775 * 294.18849 * 4 3 2 8 8 C 1.53776 * 113.61562 * 293.88502 * 3 2 1 9 9 C 1.53781 * 87.08250 * 270.88225 * 8 3 2 10 10 H 1.08997 * 113.61673 * 219.94074 * 9 8 3 11 11 N 1.46503 * 113.61314 * 89.11269 * 9 8 3 12 12 C 1.39141 * 119.99753 * 155.00312 * 11 9 8 13 13 N 1.32343 * 119.72065 * 0.02562 * 12 11 9 14 14 C 1.32001 * 121.64770 * 179.97438 * 13 12 11 15 15 C 1.37984 * 120.90274 * 0.02562 * 14 13 12 16 16 C 1.50701 * 120.32875 * 180.02562 * 15 14 13 17 17 O 1.42900 * 109.47239 * 244.99768 * 16 15 14 18 18 Si 1.86300 * 109.47208 * 4.99874 * 16 15 14 19 19 C 1.38901 * 119.34662 * 359.97438 * 15 14 13 20 20 C 1.38446 * 118.48544 * 359.74755 * 19 15 14 21 21 F 1.35098 * 120.47658 * 180.26658 * 20 19 15 22 22 C 1.53781 * 113.61596 * 196.27206 * 3 2 1 23 23 H 1.08997 * 109.47010 * 293.66131 * 1 2 3 24 24 H 1.08999 * 109.47316 * 173.65858 * 1 2 3 25 25 H 1.09003 * 109.46920 * 53.65630 * 1 2 3 26 26 H 1.08997 * 113.61735 * 25.42876 * 8 3 2 27 27 H 1.09001 * 113.61739 * 156.25133 * 8 3 2 28 28 H 0.97000 * 119.99716 * 335.00432 * 11 9 8 29 29 H 1.08005 * 119.55096 * 180.02562 * 14 13 12 30 30 H 1.09002 * 109.47254 * 124.99658 * 16 15 14 31 31 H 0.96705 * 113.99593 * 59.99159 * 17 16 15 32 32 H 1.48501 * 109.99798 * 58.67904 * 18 16 15 33 33 H 1.48494 * 110.00115 * 180.02562 * 18 16 15 34 34 H 1.08004 * 120.76129 * 179.97438 * 19 15 14 35 35 H 1.08996 * 113.61801 * 203.66183 * 22 3 2 36 36 H 1.08999 * 113.61575 * 334.56966 * 22 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 6 1.7092 2.0898 1.2787 5 9 2.0990 1.3360 2.3909 6 9 2.4161 3.2970 1.2627 7 9 0.3373 2.3538 1.3518 8 6 1.7397 2.1002 -1.2883 9 6 3.0238 1.4704 -1.8532 10 1 3.6283 2.1624 -2.4394 11 7 2.8003 0.1926 -2.5341 12 6 3.6902 -0.2391 -3.5128 13 7 4.7368 0.5088 -3.8239 14 6 5.6050 0.1360 -4.7457 15 6 5.4508 -1.0559 -5.4237 16 6 6.4501 -1.4691 -6.4733 17 8 5.8110 -1.5072 -7.7508 18 14 7.8500 -0.2405 -6.5158 19 6 4.3660 -1.8716 -5.1285 20 6 3.4749 -1.4579 -4.1531 21 9 2.4089 -2.2224 -3.8301 22 6 3.4965 1.3180 -0.3948 23 1 -0.3633 0.4124 0.9413 24 1 -0.3634 -1.0213 -0.1135 25 1 -0.3633 0.6090 -0.8278 26 1 0.8348 1.7900 -1.8109 27 1 1.8030 3.1803 -1.1565 28 1 2.0320 -0.3524 -2.3026 29 1 6.4475 0.7726 -4.9724 30 1 6.8415 -2.4577 -6.2332 31 1 5.4382 -0.6595 -8.0295 32 1 8.5028 -0.1682 -5.1839 33 1 8.8421 -0.6364 -7.5473 34 1 4.2230 -2.8090 -5.6454 35 1 4.0407 2.1846 -0.0195 36 1 4.0089 0.3766 -0.1965 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_17312454_17656566.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:02:12 Heat of formation + Delta-G solvation = -184.772789 kcal Electronic energy + Delta-G solvation = -28366.718103 eV Core-core repulsion = 23547.035269 eV Total energy + Delta-G solvation = -4819.682834 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 323.093 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -51.20138 -49.88905 -48.75433 -48.63073 -41.82111 -41.07228 -38.21278 -37.45456 -35.24488 -33.23141 -31.37736 -29.05733 -28.17599 -26.97327 -26.49624 -25.30607 -23.66895 -22.98223 -21.15836 -20.00387 -19.49425 -19.39149 -19.13225 -18.43809 -18.25881 -17.58653 -17.30815 -16.99432 -16.62785 -16.19707 -16.13585 -15.92037 -15.85696 -15.54253 -15.50559 -15.39325 -15.16841 -14.97992 -14.85043 -14.79211 -14.45807 -14.33074 -13.96996 -13.92363 -13.59594 -13.42651 -13.35743 -12.84417 -12.64648 -12.39707 -12.12388 -11.84985 -11.47315 -10.97782 -10.75066 -10.70048 -10.49153 -8.84957 -5.11485 -0.11035 0.07131 1.19924 1.51907 1.56625 1.72935 1.91977 2.03041 2.46804 2.52736 2.58558 2.77811 3.00733 3.15666 3.30431 3.36161 3.38252 3.47855 3.55411 3.79524 3.92612 3.96259 4.07509 4.16934 4.27477 4.30954 4.36846 4.39121 4.45204 4.56724 4.62853 4.66457 4.71604 4.94014 5.32117 5.56281 5.87461 6.11772 6.49883 6.88937 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.006 3.994 2 O -0.334 6.334 3 C 0.040 3.960 4 C 0.438 3.562 5 F -0.174 7.174 6 F -0.174 7.174 7 F -0.182 7.182 8 C -0.165 4.165 9 C 0.151 3.849 10 H 0.125 0.875 11 N -0.696 5.696 12 C 0.392 3.608 13 N -0.511 5.511 14 C 0.149 3.851 15 C -0.208 4.208 16 C -0.055 4.055 17 O -0.540 6.540 18 Si 0.684 3.316 19 C -0.037 4.037 20 C -0.017 4.017 21 F -0.132 7.132 22 C -0.132 4.132 23 H 0.058 0.942 24 H 0.102 0.898 25 H 0.055 0.945 26 H 0.096 0.904 27 H 0.121 0.879 28 H 0.417 0.583 29 H 0.164 0.836 30 H 0.115 0.885 31 H 0.380 0.620 32 H -0.253 1.253 33 H -0.251 1.251 34 H 0.150 0.850 35 H 0.121 0.879 36 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.482 2.950 -2.625 3.978 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.090 4.090 2 O -0.252 6.252 3 C -0.003 4.003 4 C 0.383 3.617 5 F -0.155 7.155 6 F -0.156 7.156 7 F -0.163 7.163 8 C -0.203 4.203 9 C 0.044 3.956 10 H 0.143 0.857 11 N -0.329 5.329 12 C 0.154 3.846 13 N -0.228 5.228 14 C -0.008 4.008 15 C -0.213 4.213 16 C -0.167 4.167 17 O -0.345 6.345 18 Si 0.586 3.414 19 C -0.064 4.064 20 C -0.043 4.043 21 F -0.111 7.111 22 C -0.171 4.171 23 H 0.077 0.923 24 H 0.120 0.880 25 H 0.074 0.926 26 H 0.115 0.885 27 H 0.139 0.861 28 H 0.256 0.744 29 H 0.181 0.819 30 H 0.133 0.867 31 H 0.227 0.773 32 H -0.178 1.178 33 H -0.176 1.176 34 H 0.167 0.833 35 H 0.139 0.861 36 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges 0.765 3.218 -1.927 3.829 hybrid contribution -1.334 -1.460 0.494 2.039 sum -0.569 1.758 -1.433 2.339 Atomic orbital electron populations 1.23244 0.79399 1.04357 1.01990 1.88096 1.21189 1.21959 1.93909 1.24031 0.99947 0.86202 0.90074 1.21188 0.74351 0.78791 0.87341 1.93222 1.90644 1.75784 1.55891 1.93186 1.78575 1.47125 1.96696 1.93178 1.31988 1.94297 1.96853 1.24053 1.00556 1.01806 0.93883 1.21588 0.95977 0.85802 0.92249 0.85689 1.44224 1.27719 1.22410 1.38548 1.18375 0.89442 0.88063 0.88690 1.67266 1.03570 1.33142 1.18787 1.22317 0.95657 0.93083 0.89756 1.20944 0.99693 0.97356 1.03313 1.24869 1.00675 1.08439 0.82700 1.86521 1.77142 1.38036 1.32831 0.94910 0.78168 0.86605 0.81750 1.21297 0.91620 1.00121 0.93329 1.17985 0.90676 0.92312 1.03327 1.91501 1.53258 1.74381 1.91992 1.23792 0.90827 1.05855 0.96637 0.92293 0.87999 0.92634 0.88518 0.86119 0.74403 0.81923 0.86719 0.77291 1.17803 1.17599 0.83267 0.86097 0.88319 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 10.18 101.05 1.03 1.02 16 2 O -0.33 -0.02 9.22 -35.23 -0.32 -0.34 16 3 C 0.04 -0.03 0.79 -89.80 -0.07 -0.10 16 4 C 0.44 0.34 2.61 37.16 0.10 0.43 16 5 F -0.17 -0.47 17.26 2.25 0.04 -0.43 16 6 F -0.17 -0.11 15.72 2.25 0.04 -0.07 16 7 F -0.18 -0.21 14.85 2.25 0.03 -0.17 16 8 C -0.16 0.44 6.78 -25.92 -0.18 0.27 16 9 C 0.15 -0.27 4.36 -66.97 -0.29 -0.56 16 10 H 0.13 -0.25 7.41 -51.93 -0.38 -0.63 16 11 N -0.70 0.32 5.30 -52.92 -0.28 0.04 16 12 C 0.39 0.32 7.49 -154.85 -1.16 -0.84 16 13 N -0.51 -0.25 9.13 -12.36 -0.11 -0.37 16 14 C 0.15 -0.15 9.84 -17.57 -0.17 -0.32 16 15 C -0.21 0.19 5.36 -104.47 -0.56 -0.37 16 16 C -0.06 0.09 2.82 36.01 0.10 0.19 16 17 O -0.54 0.52 12.84 -35.23 -0.45 0.07 16 18 Si 0.68 -1.65 29.83 -169.99 -5.07 -6.72 16 19 C -0.04 -0.01 9.82 -39.26 -0.39 -0.39 16 20 C -0.02 -0.02 7.35 -39.09 -0.29 -0.31 16 21 F -0.13 -0.27 16.65 2.25 0.04 -0.23 16 22 C -0.13 0.19 7.18 -25.77 -0.18 0.00 16 23 H 0.06 -0.05 6.30 -51.93 -0.33 -0.38 16 24 H 0.10 -0.29 8.14 -51.93 -0.42 -0.71 16 25 H 0.06 -0.16 6.57 -51.93 -0.34 -0.50 16 26 H 0.10 -0.30 6.72 -51.93 -0.35 -0.65 16 27 H 0.12 -0.45 7.69 -51.93 -0.40 -0.85 16 28 H 0.42 -0.23 7.06 -40.82 -0.29 -0.52 16 29 H 0.16 -0.57 4.91 -52.48 -0.26 -0.82 16 30 H 0.12 -0.13 7.96 -51.93 -0.41 -0.55 16 31 H 0.38 -1.83 8.70 45.56 0.40 -1.44 16 32 H -0.25 0.03 7.11 56.52 0.40 0.43 16 33 H -0.25 -0.26 7.11 56.52 0.40 0.14 16 34 H 0.15 -0.09 8.06 -52.48 -0.42 -0.51 16 35 H 0.12 -0.32 7.29 -51.93 -0.38 -0.69 16 36 H 0.10 -0.02 8.14 -51.93 -0.42 -0.44 16 LS Contribution 314.53 15.07 4.74 4.74 Total: 0.00 -5.98 314.53 -6.63 -12.61 By element: Atomic # 1 Polarization: -4.94 SS G_CDS: -3.21 Total: -8.14 kcal Atomic # 6 Polarization: 1.07 SS G_CDS: -2.06 Total: -0.99 kcal Atomic # 7 Polarization: 0.07 SS G_CDS: -0.39 Total: -0.32 kcal Atomic # 8 Polarization: 0.51 SS G_CDS: -0.78 Total: -0.27 kcal Atomic # 9 Polarization: -1.05 SS G_CDS: 0.15 Total: -0.90 kcal Atomic # 14 Polarization: -1.65 SS G_CDS: -5.07 Total: -6.72 kcal Total LS contribution 4.74 Total: 4.74 kcal Total: -5.98 -6.63 -12.61 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17312454_17656566.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -172.164 kcal (2) G-P(sol) polarization free energy of solvation -5.983 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -178.146 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.626 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -12.609 kcal (6) G-S(sol) free energy of system = (1) + (5) -184.773 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds