Wall clock time and date at job start Mon Mar 8 2021 09:41:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.42900 * 114.00306 * 2 1 4 4 C 1.52992 * 112.90822 * 294.08017 * 3 2 1 5 5 F 1.39906 * 109.47460 * 195.62249 * 4 3 2 6 6 F 1.39902 * 109.47221 * 315.61908 * 4 3 2 7 7 F 1.39897 * 109.47305 * 75.61955 * 4 3 2 8 8 C 1.53784 * 113.61727 * 162.82432 * 3 2 1 9 9 C 1.53781 * 87.08150 * 270.88646 * 8 3 2 10 10 H 1.08996 * 113.61601 * 220.01797 * 9 8 3 11 11 C 1.53003 * 113.61256 * 89.11546 * 9 8 3 12 12 N 1.46498 * 109.47007 * 87.50118 * 11 9 8 13 13 C 1.38405 * 119.99958 * 179.97438 * 12 11 9 14 14 N 1.32499 * 119.21797 * 359.73600 * 13 12 11 15 15 C 1.32275 * 120.74002 * 179.71631 * 14 13 12 16 16 C 1.38608 * 119.19881 * 0.54112 * 15 14 13 17 17 C 1.50702 * 120.72144 * 179.75302 * 16 15 14 18 18 O 1.42900 * 109.46811 * 244.97688 * 17 16 15 19 19 Si 1.86297 * 109.47072 * 4.97661 * 17 16 15 20 20 C 1.38609 * 118.55587 * 359.73191 * 16 15 14 21 21 N 1.32278 * 119.19770 * 0.02562 * 20 16 15 22 22 C 1.53775 * 87.08269 * 334.56943 * 9 8 3 23 23 H 1.09002 * 109.47305 * 182.99683 * 1 2 3 24 24 H 1.09005 * 109.46664 * 302.99231 * 1 2 3 25 25 H 1.08994 * 109.47200 * 62.99466 * 1 2 3 26 26 H 1.09005 * 113.60902 * 25.43577 * 8 3 2 27 27 H 1.09000 * 113.61343 * 156.33599 * 8 3 2 28 28 H 1.09002 * 109.46671 * 207.50040 * 11 9 8 29 29 H 1.08999 * 109.47171 * 327.50493 * 11 9 8 30 30 H 0.96998 * 120.00624 * 359.97438 * 12 11 9 31 31 H 1.07997 * 120.40287 * 180.25066 * 15 14 13 32 32 H 1.09000 * 109.46832 * 124.98209 * 17 16 15 33 33 H 0.96701 * 113.99726 * 179.97438 * 18 17 16 34 34 H 1.48499 * 109.99854 * 178.68060 * 19 17 16 35 35 H 1.48498 * 110.00023 * 300.00066 * 19 17 16 36 36 H 1.08000 * 120.39750 * 179.97438 * 20 16 15 37 37 H 1.09003 * 113.61311 * 270.88717 * 22 9 8 38 38 H 1.09000 * 113.61652 * 139.98255 * 22 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 6 1.7273 2.0834 -1.2866 5 9 2.5975 3.1755 -1.3724 6 9 1.9204 1.2455 -2.3902 7 9 0.4051 2.5405 -1.2739 8 6 3.4907 1.3206 0.4161 9 6 3.0005 1.4807 1.8649 10 1 3.5982 2.1764 2.4537 11 6 2.7582 0.1502 2.5804 12 7 4.0047 -0.3043 3.2015 13 6 4.0315 -1.4928 3.9102 14 7 2.9195 -2.2046 4.0217 15 6 2.9122 -3.3476 4.6874 16 6 4.0833 -3.7918 5.2810 17 6 4.1126 -5.0862 6.0523 18 8 4.3860 -4.8146 7.4283 19 14 2.4612 -5.9355 5.9030 20 6 5.2270 -3.0199 5.1494 21 7 5.1671 -1.8890 4.4660 22 6 1.7235 2.1073 1.2805 23 1 -0.3634 -1.0263 0.0537 24 1 -0.3633 0.5596 0.8620 25 1 -0.3633 0.4666 -0.9156 26 1 4.0059 0.3780 0.2311 27 1 4.0402 2.1849 0.0430 28 1 1.9971 0.2845 3.3491 29 1 2.4192 -0.5936 1.8594 30 1 4.8113 0.2276 3.1160 31 1 2.0037 -3.9254 4.7715 32 1 4.8916 -5.7326 5.6478 33 1 4.4193 -5.6040 7.9859 34 1 2.4873 -7.2285 6.6328 35 1 1.3907 -5.0644 6.4510 36 1 6.1556 -3.3376 5.6002 37 1 1.7900 3.1867 1.1437 38 1 0.8122 1.7999 1.7933 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_17317798_12175864.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:41:23 Heat of formation + Delta-G solvation = -125.884762 kcal Electronic energy + Delta-G solvation = -27592.202604 eV Core-core repulsion = 23023.563792 eV Total energy + Delta-G solvation = -4568.638812 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 320.113 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -51.15692 -48.70573 -48.58842 -42.03369 -41.48330 -38.26097 -37.60946 -36.21454 -34.61747 -32.76052 -30.08755 -28.27742 -27.47091 -26.91115 -26.03934 -25.44472 -23.35063 -22.86959 -20.81068 -19.78964 -19.45069 -19.35098 -19.03097 -18.68725 -18.38168 -17.31630 -16.68927 -16.48912 -16.36127 -16.30915 -15.75751 -15.61611 -15.55038 -15.49349 -15.35214 -15.16167 -14.97941 -14.77223 -14.71116 -14.53418 -14.37088 -14.09683 -13.92686 -13.41624 -13.29090 -13.18174 -12.75338 -12.34005 -12.22942 -12.15653 -11.76005 -11.74790 -11.68026 -11.30681 -10.82884 -10.68174 -9.93934 -9.03203 -5.03523 0.14094 0.24986 1.21224 1.52204 1.56693 1.80973 1.88792 2.02748 2.56021 2.63693 2.83441 2.84430 3.15357 3.21807 3.33659 3.35672 3.46073 3.63113 3.68330 3.82907 3.89093 4.10692 4.15620 4.16823 4.24287 4.28493 4.37815 4.49087 4.49959 4.57991 4.63134 4.69981 4.75431 4.83264 5.02490 5.26964 5.65578 5.81880 6.06474 6.37362 6.47375 7.36561 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.011 3.989 2 O -0.329 6.329 3 C 0.042 3.958 4 C 0.436 3.564 5 F -0.176 7.176 6 F -0.174 7.174 7 F -0.182 7.182 8 C -0.115 4.115 9 C -0.115 4.115 10 H 0.101 0.899 11 C 0.147 3.853 12 N -0.694 5.694 13 C 0.568 3.432 14 N -0.560 5.560 15 C 0.201 3.799 16 C -0.247 4.247 17 C -0.054 4.054 18 O -0.538 6.538 19 Si 0.676 3.324 20 C 0.224 3.776 21 N -0.569 5.569 22 C -0.142 4.142 23 H 0.103 0.897 24 H 0.056 0.944 25 H 0.052 0.948 26 H 0.098 0.902 27 H 0.115 0.885 28 H 0.072 0.928 29 H 0.092 0.908 30 H 0.415 0.585 31 H 0.166 0.834 32 H 0.078 0.922 33 H 0.381 0.619 34 H -0.257 1.257 35 H -0.253 1.253 36 H 0.169 0.831 37 H 0.109 0.891 38 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.488 -1.835 0.441 1.949 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.084 4.084 2 O -0.247 6.247 3 C -0.001 4.001 4 C 0.381 3.619 5 F -0.157 7.157 6 F -0.156 7.156 7 F -0.163 7.163 8 C -0.152 4.152 9 C -0.133 4.133 10 H 0.119 0.881 11 C 0.023 3.977 12 N -0.331 5.331 13 C 0.211 3.789 14 N -0.282 5.282 15 C 0.033 3.967 16 C -0.255 4.255 17 C -0.165 4.165 18 O -0.345 6.345 19 Si 0.577 3.423 20 C 0.056 3.944 21 N -0.291 5.291 22 C -0.180 4.180 23 H 0.121 0.879 24 H 0.074 0.926 25 H 0.070 0.930 26 H 0.116 0.884 27 H 0.133 0.867 28 H 0.090 0.910 29 H 0.110 0.890 30 H 0.252 0.748 31 H 0.183 0.817 32 H 0.096 0.904 33 H 0.229 0.771 34 H -0.182 1.182 35 H -0.177 1.177 36 H 0.186 0.814 37 H 0.128 0.872 38 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges -1.299 -0.724 -0.019 1.488 hybrid contribution 0.563 -0.428 1.179 1.375 sum -0.736 -1.153 1.160 1.794 Atomic orbital electron populations 1.23135 0.79447 1.04439 1.01422 1.88108 1.21158 1.21599 1.93785 1.23966 0.99848 0.86485 0.89817 1.21220 0.74294 0.78724 0.87616 1.93178 1.69617 1.56292 1.96632 1.93221 1.94719 1.71031 1.56597 1.93190 1.36453 1.89817 1.96852 1.23293 0.91184 1.05557 0.95179 1.22426 0.97719 0.97504 0.95689 0.88083 1.21286 0.85316 0.94229 0.96852 1.44053 1.13610 1.20063 1.55390 1.19335 0.84940 0.87197 0.87428 1.67950 1.28600 1.08391 1.23288 1.22760 0.96580 0.89648 0.87668 1.20601 0.96804 1.00959 1.07158 1.24401 1.11220 0.97789 0.83096 1.86593 1.93203 1.36603 1.18137 0.95232 0.76295 0.78835 0.91920 1.22790 0.97873 0.86220 0.87559 1.67966 1.27370 1.18182 1.15585 1.23563 0.99804 1.00903 0.93735 0.87913 0.92587 0.92959 0.88368 0.86700 0.91027 0.89039 0.74794 0.81709 0.90409 0.77092 1.18197 1.17715 0.81421 0.87240 0.88557 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.02 10.33 101.05 1.04 1.03 16 2 O -0.33 -0.03 8.37 -35.23 -0.29 -0.33 16 3 C 0.04 -0.04 0.84 -89.81 -0.08 -0.11 16 4 C 0.44 0.38 2.52 37.15 0.09 0.48 16 5 F -0.18 -0.16 15.81 2.25 0.04 -0.13 16 6 F -0.17 -0.47 17.11 2.25 0.04 -0.43 16 7 F -0.18 -0.23 15.34 2.25 0.03 -0.20 16 8 C -0.12 0.24 6.89 -25.92 -0.18 0.06 16 9 C -0.11 0.32 3.94 -89.81 -0.35 -0.03 16 10 H 0.10 -0.39 8.14 -51.93 -0.42 -0.82 16 11 C 0.15 -0.13 5.23 -4.04 -0.02 -0.16 16 12 N -0.69 -0.25 5.70 -62.31 -0.36 -0.61 16 13 C 0.57 1.65 8.43 -322.80 -2.72 -1.07 16 14 N -0.56 -1.61 9.59 -13.93 -0.13 -1.75 16 15 C 0.20 0.27 9.92 -17.22 -0.17 0.10 16 16 C -0.25 -0.24 5.40 -104.35 -0.56 -0.81 16 17 C -0.05 0.06 2.82 36.01 0.10 0.16 16 18 O -0.54 -0.11 12.82 -35.23 -0.45 -0.56 16 19 Si 0.68 -1.22 29.92 -169.99 -5.09 -6.31 16 20 C 0.22 0.39 10.99 -17.22 -0.19 0.20 16 21 N -0.57 -1.84 10.46 -13.93 -0.15 -1.98 16 22 C -0.14 0.38 6.52 -25.92 -0.17 0.22 16 23 H 0.10 -0.27 8.14 -51.93 -0.42 -0.69 16 24 H 0.06 -0.15 6.60 -51.93 -0.34 -0.50 16 25 H 0.05 -0.05 6.56 -51.93 -0.34 -0.39 16 26 H 0.10 -0.14 8.10 -51.93 -0.42 -0.56 16 27 H 0.11 -0.34 7.03 -51.93 -0.36 -0.70 16 28 H 0.07 -0.02 8.14 -51.93 -0.42 -0.45 16 29 H 0.09 0.04 6.12 -51.93 -0.32 -0.28 16 30 H 0.41 -0.41 8.59 -40.82 -0.35 -0.76 16 31 H 0.17 -0.17 5.04 -52.49 -0.26 -0.44 16 32 H 0.08 -0.23 7.96 -51.93 -0.41 -0.64 16 33 H 0.38 -1.43 8.74 45.56 0.40 -1.03 16 34 H -0.26 -0.06 7.11 56.52 0.40 0.35 16 35 H -0.25 -0.30 7.06 56.52 0.40 0.10 16 36 H 0.17 -0.06 8.06 -52.49 -0.42 -0.49 16 37 H 0.11 -0.37 8.03 -51.93 -0.42 -0.79 16 38 H 0.10 -0.31 6.64 -51.93 -0.35 -0.65 16 LS Contribution 325.00 15.07 4.90 4.90 Total: 0.00 -7.32 325.00 -8.73 -16.05 By element: Atomic # 1 Polarization: -4.66 SS G_CDS: -4.07 Total: -8.73 kcal Atomic # 6 Polarization: 3.27 SS G_CDS: -3.20 Total: 0.07 kcal Atomic # 7 Polarization: -3.70 SS G_CDS: -0.63 Total: -4.34 kcal Atomic # 8 Polarization: -0.14 SS G_CDS: -0.75 Total: -0.89 kcal Atomic # 9 Polarization: -0.87 SS G_CDS: 0.11 Total: -0.76 kcal Atomic # 14 Polarization: -1.22 SS G_CDS: -5.09 Total: -6.31 kcal Total LS contribution 4.90 Total: 4.90 kcal Total: -7.32 -8.73 -16.05 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17317798_12175864.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -109.833 kcal (2) G-P(sol) polarization free energy of solvation -7.319 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -117.153 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.732 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.052 kcal (6) G-S(sol) free energy of system = (1) + (5) -125.885 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds