Wall clock time and date at job start Mon Mar 8 2021 09:41:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.42900 * 114.00306 * 2 1 4 4 C 1.52992 * 112.90822 * 294.08017 * 3 2 1 5 5 F 1.39906 * 109.47460 * 195.62249 * 4 3 2 6 6 F 1.39902 * 109.47221 * 315.61908 * 4 3 2 7 7 F 1.39897 * 109.47305 * 75.61955 * 4 3 2 8 8 C 1.53784 * 113.61727 * 162.82432 * 3 2 1 9 9 C 1.53781 * 87.08150 * 270.88646 * 8 3 2 10 10 H 1.08996 * 113.61601 * 220.01797 * 9 8 3 11 11 C 1.53003 * 113.61256 * 89.11546 * 9 8 3 12 12 N 1.46498 * 109.47007 * 87.50118 * 11 9 8 13 13 C 1.38405 * 119.99958 * 179.97438 * 12 11 9 14 14 N 1.32499 * 119.21797 * 359.73600 * 13 12 11 15 15 C 1.32275 * 120.74002 * 179.71631 * 14 13 12 16 16 C 1.38608 * 119.19881 * 0.54112 * 15 14 13 17 17 C 1.50702 * 120.72144 * 179.75302 * 16 15 14 18 18 O 1.42900 * 109.46811 * 244.97688 * 17 16 15 19 19 Si 1.86297 * 109.47072 * 4.97661 * 17 16 15 20 20 C 1.38609 * 118.55587 * 359.73191 * 16 15 14 21 21 N 1.32278 * 119.19770 * 0.02562 * 20 16 15 22 22 C 1.53775 * 87.08269 * 334.56943 * 9 8 3 23 23 H 1.09002 * 109.47305 * 182.99683 * 1 2 3 24 24 H 1.09005 * 109.46664 * 302.99231 * 1 2 3 25 25 H 1.08994 * 109.47200 * 62.99466 * 1 2 3 26 26 H 1.09005 * 113.60902 * 25.43577 * 8 3 2 27 27 H 1.09000 * 113.61343 * 156.33599 * 8 3 2 28 28 H 1.09002 * 109.46671 * 207.50040 * 11 9 8 29 29 H 1.08999 * 109.47171 * 327.50493 * 11 9 8 30 30 H 0.96998 * 120.00624 * 359.97438 * 12 11 9 31 31 H 1.07997 * 120.40287 * 180.25066 * 15 14 13 32 32 H 1.09000 * 109.46832 * 124.98209 * 17 16 15 33 33 H 0.96701 * 113.99726 * 179.97438 * 18 17 16 34 34 H 1.48499 * 109.99854 * 178.68060 * 19 17 16 35 35 H 1.48498 * 110.00023 * 300.00066 * 19 17 16 36 36 H 1.08000 * 120.39750 * 179.97438 * 20 16 15 37 37 H 1.09003 * 113.61311 * 270.88717 * 22 9 8 38 38 H 1.09000 * 113.61652 * 139.98255 * 22 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 6 1.7273 2.0834 -1.2866 5 9 2.5975 3.1755 -1.3724 6 9 1.9204 1.2455 -2.3902 7 9 0.4051 2.5405 -1.2739 8 6 3.4907 1.3206 0.4161 9 6 3.0005 1.4807 1.8649 10 1 3.5982 2.1764 2.4537 11 6 2.7582 0.1502 2.5804 12 7 4.0047 -0.3043 3.2015 13 6 4.0315 -1.4928 3.9102 14 7 2.9195 -2.2046 4.0217 15 6 2.9122 -3.3476 4.6874 16 6 4.0833 -3.7918 5.2810 17 6 4.1126 -5.0862 6.0523 18 8 4.3860 -4.8146 7.4283 19 14 2.4612 -5.9355 5.9030 20 6 5.2270 -3.0199 5.1494 21 7 5.1671 -1.8890 4.4660 22 6 1.7235 2.1073 1.2805 23 1 -0.3634 -1.0263 0.0537 24 1 -0.3633 0.5596 0.8620 25 1 -0.3633 0.4666 -0.9156 26 1 4.0059 0.3780 0.2311 27 1 4.0402 2.1849 0.0430 28 1 1.9971 0.2845 3.3491 29 1 2.4192 -0.5936 1.8594 30 1 4.8113 0.2276 3.1160 31 1 2.0037 -3.9254 4.7715 32 1 4.8916 -5.7326 5.6478 33 1 4.4193 -5.6040 7.9859 34 1 2.4873 -7.2285 6.6328 35 1 1.3907 -5.0644 6.4510 36 1 6.1556 -3.3376 5.6002 37 1 1.7900 3.1867 1.1437 38 1 0.8122 1.7999 1.7933 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_17317798_12175864.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:41:22 Heat of formation + Delta-G solvation = -123.760749 kcal Electronic energy + Delta-G solvation = -27592.110500 eV Core-core repulsion = 23023.563792 eV Total energy + Delta-G solvation = -4568.546708 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 320.113 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -51.23651 -48.77124 -48.70946 -42.08675 -41.37960 -38.22024 -37.53825 -36.18127 -34.72179 -32.77864 -30.04262 -28.14745 -27.46620 -26.74742 -26.05942 -25.47296 -23.30997 -22.89935 -20.73464 -19.79889 -19.52660 -19.37696 -19.01228 -18.68591 -18.37464 -17.19798 -16.66318 -16.41299 -16.36303 -16.32068 -15.74534 -15.64215 -15.59439 -15.53219 -15.33401 -15.20075 -15.05491 -14.87561 -14.76697 -14.56662 -14.27562 -14.05043 -13.89419 -13.31047 -13.22023 -13.05822 -12.62716 -12.27699 -12.21686 -11.98932 -11.88303 -11.74303 -11.57520 -11.31325 -10.75474 -10.63355 -10.01398 -9.06812 -4.90219 0.06254 0.15815 1.32286 1.56258 1.61625 1.81480 1.97071 2.14482 2.59954 2.66621 2.77667 2.92258 3.14282 3.34341 3.36954 3.43752 3.51673 3.66931 3.74990 3.81605 3.92628 4.19719 4.29526 4.31165 4.40512 4.48736 4.54137 4.58685 4.69213 4.72741 4.77515 4.79809 4.86428 4.88617 5.12005 5.27964 5.75910 5.77569 6.05087 6.41370 6.65207 7.28748 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.007 3.993 2 O -0.343 6.343 3 C 0.036 3.964 4 C 0.431 3.569 5 F -0.176 7.176 6 F -0.189 7.189 7 F -0.186 7.186 8 C -0.113 4.113 9 C -0.103 4.103 10 H 0.119 0.881 11 C 0.153 3.847 12 N -0.689 5.689 13 C 0.551 3.449 14 N -0.576 5.576 15 C 0.191 3.809 16 C -0.249 4.249 17 C -0.059 4.059 18 O -0.560 6.560 19 Si 0.753 3.247 20 C 0.212 3.788 21 N -0.588 5.588 22 C -0.135 4.135 23 H 0.111 0.889 24 H 0.068 0.932 25 H 0.043 0.957 26 H 0.090 0.910 27 H 0.125 0.875 28 H 0.067 0.933 29 H 0.078 0.922 30 H 0.420 0.580 31 H 0.183 0.817 32 H 0.103 0.897 33 H 0.397 0.603 34 H -0.281 1.281 35 H -0.295 1.295 36 H 0.185 0.815 37 H 0.121 0.879 38 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.198 -1.899 0.897 2.110 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.088 4.088 2 O -0.261 6.261 3 C -0.007 4.007 4 C 0.377 3.623 5 F -0.158 7.158 6 F -0.171 7.171 7 F -0.167 7.167 8 C -0.150 4.150 9 C -0.122 4.122 10 H 0.137 0.863 11 C 0.029 3.971 12 N -0.326 5.326 13 C 0.194 3.806 14 N -0.299 5.299 15 C 0.024 3.976 16 C -0.257 4.257 17 C -0.169 4.169 18 O -0.370 6.370 19 Si 0.658 3.342 20 C 0.045 3.955 21 N -0.311 5.311 22 C -0.173 4.173 23 H 0.129 0.871 24 H 0.087 0.913 25 H 0.062 0.938 26 H 0.108 0.892 27 H 0.143 0.857 28 H 0.085 0.915 29 H 0.096 0.904 30 H 0.258 0.742 31 H 0.199 0.801 32 H 0.120 0.880 33 H 0.248 0.752 34 H -0.208 1.208 35 H -0.223 1.223 36 H 0.202 0.798 37 H 0.139 0.861 38 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges -0.990 -0.795 0.428 1.340 hybrid contribution 0.446 -0.430 1.059 1.226 sum -0.544 -1.224 1.486 2.001 Atomic orbital electron populations 1.23239 0.78881 1.05177 1.01539 1.88095 1.21921 1.22296 1.93780 1.24174 1.00716 0.86323 0.89441 1.21593 0.74088 0.78736 0.87909 1.93169 1.69602 1.56363 1.96661 1.93185 1.94798 1.71501 1.57572 1.93177 1.36782 1.89879 1.96867 1.23347 0.90499 1.05609 0.95545 1.22319 0.97904 0.96734 0.95224 0.86326 1.21231 0.84757 0.94782 0.96338 1.44133 1.14230 1.19420 1.54798 1.19635 0.85059 0.87968 0.87979 1.67974 1.28809 1.09108 1.24040 1.23125 0.97483 0.89530 0.87431 1.20810 0.96350 1.01596 1.06985 1.24568 1.12697 0.97002 0.82648 1.86544 1.93341 1.38260 1.18840 0.94341 0.73547 0.75762 0.90564 1.23165 0.98893 0.86060 0.87398 1.67991 1.27670 1.19040 1.16386 1.23608 1.00090 1.01288 0.92334 0.87103 0.91304 0.93824 0.89177 0.85664 0.91521 0.90403 0.74177 0.80099 0.87969 0.75237 1.20790 1.22301 0.79815 0.86098 0.87939 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.02 10.33 113.37 1.17 1.15 16 2 O -0.34 -0.29 8.37 -148.98 -1.25 -1.53 16 3 C 0.04 -0.06 0.84 -10.27 -0.01 -0.06 16 4 C 0.43 0.95 2.52 71.98 0.18 1.13 16 5 F -0.18 -0.34 15.81 44.97 0.71 0.38 16 6 F -0.19 -1.22 17.11 44.97 0.77 -0.45 16 7 F -0.19 -0.55 15.34 44.97 0.69 0.14 16 8 C -0.11 0.49 6.89 31.12 0.21 0.70 16 9 C -0.10 0.64 3.94 -10.27 -0.04 0.60 16 10 H 0.12 -1.10 8.14 -2.39 -0.02 -1.11 16 11 C 0.15 -0.24 5.23 86.38 0.45 0.21 16 12 N -0.69 -0.79 5.70 -351.04 -2.00 -2.80 16 13 C 0.55 3.58 8.43 261.48 2.20 5.79 16 14 N -0.58 -3.74 9.59 -197.98 -1.90 -5.63 16 15 C 0.19 0.58 9.92 84.71 0.84 1.42 16 16 C -0.25 -0.48 5.40 -19.69 -0.11 -0.58 16 17 C -0.06 0.17 2.82 71.24 0.20 0.37 16 18 O -0.56 0.11 12.82 -148.98 -1.91 -1.80 16 19 Si 0.75 -2.95 29.92 68.60 2.05 -0.90 16 20 C 0.21 0.77 10.99 84.71 0.93 1.70 16 21 N -0.59 -4.11 10.46 -197.98 -2.07 -6.19 16 22 C -0.14 0.82 6.52 31.12 0.20 1.02 16 23 H 0.11 -0.52 8.14 -2.39 -0.02 -0.54 16 24 H 0.07 -0.38 6.60 -2.38 -0.02 -0.39 16 25 H 0.04 -0.04 6.56 -2.39 -0.02 -0.05 16 26 H 0.09 -0.22 8.10 -2.38 -0.02 -0.24 16 27 H 0.13 -0.81 7.03 -2.39 -0.02 -0.82 16 28 H 0.07 -0.03 8.14 -2.39 -0.02 -0.05 16 29 H 0.08 0.13 6.12 -2.39 -0.01 0.11 16 30 H 0.42 -0.74 8.59 -92.71 -0.80 -1.54 16 31 H 0.18 -0.32 5.04 -2.91 -0.01 -0.34 16 32 H 0.10 -0.78 7.96 -2.39 -0.02 -0.79 16 33 H 0.40 -3.26 8.74 -74.06 -0.65 -3.91 16 34 H -0.28 -0.03 7.11 99.48 0.71 0.68 16 35 H -0.30 -0.95 7.06 99.48 0.70 -0.25 16 36 H 0.18 -0.18 8.06 -2.91 -0.02 -0.21 16 37 H 0.12 -0.97 8.03 -2.39 -0.02 -0.99 16 38 H 0.10 -0.73 6.64 -2.39 -0.02 -0.74 16 Total: 0.00 -17.59 325.00 1.07 -16.52 By element: Atomic # 1 Polarization: -10.92 SS G_CDS: -0.27 Total: -11.18 kcal Atomic # 6 Polarization: 7.22 SS G_CDS: 6.24 Total: 13.46 kcal Atomic # 7 Polarization: -8.64 SS G_CDS: -5.97 Total: -14.61 kcal Atomic # 8 Polarization: -0.17 SS G_CDS: -3.16 Total: -3.33 kcal Atomic # 9 Polarization: -2.11 SS G_CDS: 2.17 Total: 0.06 kcal Atomic # 14 Polarization: -2.95 SS G_CDS: 2.05 Total: -0.90 kcal Total: -17.59 1.07 -16.52 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17317798_12175864.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -107.244 kcal (2) G-P(sol) polarization free energy of solvation -17.586 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -124.831 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.070 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.516 kcal (6) G-S(sol) free energy of system = (1) + (5) -123.761 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds