Wall clock time and date at job start Mon Mar 8 2021 09:41:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.42902 * 113.99878 * 2 1 4 4 C 1.52999 * 112.85050 * 294.01012 * 3 2 1 5 5 F 1.39893 * 109.47295 * 195.89098 * 4 3 2 6 6 F 1.39902 * 109.46858 * 315.89577 * 4 3 2 7 7 F 1.39903 * 109.47286 * 75.88948 * 4 3 2 8 8 C 1.53777 * 113.68809 * 162.74088 * 3 2 1 9 9 C 1.53779 * 87.08243 * 270.86946 * 8 3 2 10 10 H 1.09002 * 113.69375 * 220.00724 * 9 8 3 11 11 C 1.53000 * 113.61301 * 89.11764 * 9 8 3 12 12 N 1.46503 * 109.47143 * 87.50304 * 11 9 8 13 13 C 1.39141 * 120.00062 * 180.27856 * 12 11 9 14 14 N 1.32342 * 119.71957 * 359.45279 * 13 12 11 15 15 C 1.32002 * 121.64608 * 179.71729 * 14 13 12 16 16 C 1.37983 * 120.90100 * 0.55496 * 15 14 13 17 17 C 1.50703 * 120.32420 * 179.74790 * 16 15 14 18 18 O 1.42905 * 109.46725 * 119.98219 * 17 16 15 19 19 Si 1.86296 * 109.47334 * 359.97438 * 17 16 15 20 20 C 1.38897 * 119.34971 * 359.73506 * 16 15 14 21 21 C 1.38448 * 118.48262 * 359.97438 * 20 16 15 22 22 F 1.35101 * 120.46979 * 180.02562 * 21 20 16 23 23 C 1.53780 * 87.08114 * 334.56927 * 9 8 3 24 24 H 1.08994 * 109.47724 * 304.84336 * 1 2 3 25 25 H 1.09002 * 109.46810 * 64.84496 * 1 2 3 26 26 H 1.09005 * 109.47064 * 184.83991 * 1 2 3 27 27 H 1.09004 * 113.61099 * 156.32619 * 8 3 2 28 28 H 1.08996 * 113.61598 * 25.42364 * 8 3 2 29 29 H 1.09001 * 109.46906 * 327.50612 * 11 9 8 30 30 H 1.08995 * 109.47486 * 207.50348 * 11 9 8 31 31 H 0.96996 * 120.00164 * 0.02562 * 12 11 9 32 32 H 1.08003 * 119.55006 * 180.28641 * 15 14 13 33 33 H 1.09002 * 109.47498 * 239.97861 * 17 16 15 34 34 H 0.96706 * 113.99815 * 179.97438 * 18 17 16 35 35 H 1.48501 * 110.00190 * 298.67658 * 19 17 16 36 36 H 1.48502 * 109.99990 * 59.99776 * 19 17 16 37 37 H 1.08007 * 120.76095 * 180.02562 * 20 16 15 38 38 H 1.09004 * 113.61221 * 139.97726 * 23 9 8 39 39 H 1.08999 * 113.61570 * 270.87710 * 23 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 1.7278 2.0816 -1.2879 5 9 2.6016 3.1704 -1.3775 6 9 1.9161 1.2406 -2.3899 7 9 0.4072 2.5434 -1.2741 8 6 3.4901 1.3229 0.4178 9 6 2.9980 1.4842 1.8658 10 1 3.5935 2.1810 2.4557 11 6 2.7565 0.1543 2.5827 12 7 4.0028 -0.2980 3.2058 13 6 4.0319 -1.4950 3.9145 14 7 2.9278 -2.2153 4.0314 15 6 2.9135 -3.3590 4.6902 16 6 4.0555 -3.8428 5.2950 17 6 4.0230 -5.1473 6.0488 18 8 4.9427 -6.0646 5.4530 19 14 2.3033 -5.8605 5.9821 20 6 5.2353 -3.1157 5.2020 21 6 5.2220 -1.9227 4.4996 22 9 6.3469 -1.1835 4.3834 23 6 1.7210 2.1086 1.2791 24 1 -0.3634 0.5871 0.8433 25 1 -0.3633 0.4368 -0.9302 26 1 -0.3633 -1.0240 0.0867 27 1 4.0390 2.1875 0.0444 28 1 4.0067 0.3808 0.2345 29 1 2.4192 -0.5908 1.8622 30 1 1.9944 0.2885 3.3503 31 1 4.8087 0.2352 3.1213 32 1 1.9943 -3.9217 4.7606 33 1 4.3043 -4.9740 7.0875 34 1 4.9750 -6.9277 5.8881 35 1 1.3422 -4.9302 6.6272 36 1 1.9077 -6.1016 4.5712 37 1 6.1426 -3.4732 5.6663 38 1 0.8094 1.8006 1.7913 39 1 1.7862 3.1879 1.1412 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_17317798_17656566.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:41:34 Heat of formation + Delta-G solvation = -187.575769 kcal Electronic energy + Delta-G solvation = -30054.770386 eV Core-core repulsion = 25079.428387 eV Total energy + Delta-G solvation = -4975.341999 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.109 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -51.17210 -49.85616 -48.72099 -48.60321 -41.70728 -41.21756 -38.19394 -37.52930 -36.18942 -33.31348 -32.04302 -29.94923 -28.29208 -27.42057 -26.92940 -26.02442 -24.62732 -23.24659 -22.73281 -20.83669 -19.79534 -19.46449 -19.38233 -19.00819 -18.58888 -18.21995 -17.97209 -17.34017 -16.90529 -16.66042 -16.48359 -16.17773 -15.75109 -15.68738 -15.52170 -15.49617 -15.40654 -15.06665 -15.04127 -14.81691 -14.78703 -14.57670 -14.37568 -14.34099 -14.09874 -13.89660 -13.80245 -13.40721 -13.17735 -12.75194 -12.57880 -12.33414 -12.17279 -12.07406 -11.75804 -11.38680 -10.88256 -10.74206 -10.66322 -10.33089 -8.74508 -5.04264 -0.07462 0.14589 1.21129 1.54982 1.58859 1.88726 1.90940 2.00899 2.53898 2.54627 2.61967 2.81485 3.04139 3.13044 3.23753 3.31273 3.36941 3.45688 3.60829 3.64830 3.84830 4.07567 4.09656 4.13506 4.21956 4.26101 4.26689 4.35239 4.47521 4.50540 4.55938 4.60523 4.66791 4.68410 4.73570 4.98169 5.01828 5.35453 5.63695 5.91514 6.15336 6.56725 6.94854 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.012 3.988 2 O -0.329 6.329 3 C 0.042 3.958 4 C 0.436 3.564 5 F -0.176 7.176 6 F -0.174 7.174 7 F -0.182 7.182 8 C -0.116 4.116 9 C -0.115 4.115 10 H 0.100 0.900 11 C 0.143 3.857 12 N -0.716 5.716 13 C 0.391 3.609 14 N -0.510 5.510 15 C 0.142 3.858 16 C -0.164 4.164 17 C -0.059 4.059 18 O -0.547 6.547 19 Si 0.681 3.319 20 C -0.034 4.034 21 C -0.018 4.018 22 F -0.132 7.132 23 C -0.142 4.142 24 H 0.056 0.944 25 H 0.052 0.948 26 H 0.102 0.898 27 H 0.115 0.885 28 H 0.097 0.903 29 H 0.090 0.910 30 H 0.071 0.929 31 H 0.413 0.587 32 H 0.154 0.846 33 H 0.076 0.924 34 H 0.384 0.616 35 H -0.251 1.251 36 H -0.247 1.247 37 H 0.151 0.849 38 H 0.096 0.904 39 H 0.109 0.891 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.936 -1.986 4.772 5.253 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.084 4.084 2 O -0.247 6.247 3 C -0.001 4.001 4 C 0.382 3.618 5 F -0.157 7.157 6 F -0.156 7.156 7 F -0.163 7.163 8 C -0.153 4.153 9 C -0.134 4.134 10 H 0.119 0.881 11 C 0.019 3.981 12 N -0.349 5.349 13 C 0.152 3.848 14 N -0.227 5.227 15 C -0.015 4.015 16 C -0.169 4.169 17 C -0.170 4.170 18 O -0.353 6.353 19 Si 0.582 3.418 20 C -0.061 4.061 21 C -0.044 4.044 22 F -0.111 7.111 23 C -0.180 4.180 24 H 0.074 0.926 25 H 0.071 0.929 26 H 0.120 0.880 27 H 0.133 0.867 28 H 0.116 0.884 29 H 0.108 0.892 30 H 0.089 0.911 31 H 0.250 0.750 32 H 0.170 0.830 33 H 0.094 0.906 34 H 0.232 0.768 35 H -0.176 1.176 36 H -0.171 1.171 37 H 0.169 0.831 38 H 0.114 0.886 39 H 0.128 0.872 Dipole moment (debyes) X Y Z Total from point charges -2.487 -1.116 3.557 4.481 hybrid contribution 1.295 0.858 -0.088 1.556 sum -1.193 -0.258 3.468 3.677 Atomic orbital electron populations 1.23130 0.79453 1.04384 1.01440 1.88113 1.21155 1.21641 1.93789 1.23963 0.99835 0.86475 0.89835 1.21210 0.74304 0.78697 0.87634 1.93174 1.69392 1.56519 1.96614 1.93221 1.94786 1.70842 1.56706 1.93193 1.36586 1.89676 1.96848 1.23291 0.91232 1.05528 0.95207 1.22433 0.97693 0.97568 0.95669 0.88148 1.21276 0.85752 0.94228 0.96817 1.44462 1.13571 1.20486 1.56410 1.18368 0.88140 0.87992 0.90298 1.67276 1.26227 1.07897 1.21284 1.22114 0.97103 0.91117 0.91141 1.19933 0.94171 0.97758 1.05069 1.24464 1.05669 0.89541 0.97344 1.86496 1.63359 1.26782 1.58692 0.95121 0.74553 0.88591 0.83532 1.21250 0.99332 0.90779 0.94702 1.17966 0.83068 0.94836 1.08562 1.91492 1.48900 1.75777 1.94943 1.23563 0.99795 1.00891 0.93749 0.92569 0.92931 0.87991 0.86667 0.88433 0.89242 0.91113 0.75013 0.82960 0.90577 0.76847 1.17598 1.17132 0.83093 0.88589 0.87225 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 10.30 101.05 1.04 1.03 16 2 O -0.33 -0.30 8.37 -35.23 -0.29 -0.60 16 3 C 0.04 -0.01 0.84 -89.81 -0.08 -0.09 16 4 C 0.44 0.60 2.52 37.16 0.09 0.69 16 5 F -0.18 -0.23 15.81 2.25 0.04 -0.20 16 6 F -0.17 -0.57 17.10 2.25 0.04 -0.53 16 7 F -0.18 -0.31 15.39 2.25 0.03 -0.27 16 8 C -0.12 0.17 6.89 -25.92 -0.18 -0.01 16 9 C -0.11 0.26 3.94 -89.81 -0.35 -0.09 16 10 H 0.10 -0.35 8.14 -51.93 -0.42 -0.77 16 11 C 0.14 -0.04 5.28 -4.04 -0.02 -0.06 16 12 N -0.72 -0.42 5.71 -60.34 -0.34 -0.76 16 13 C 0.39 1.11 7.49 -154.86 -1.16 -0.05 16 14 N -0.51 -1.85 9.57 -12.37 -0.12 -1.97 16 15 C 0.14 0.39 9.84 -17.57 -0.17 0.21 16 16 C -0.16 -0.31 5.43 -104.47 -0.57 -0.87 16 17 C -0.06 0.05 2.83 36.01 0.10 0.16 16 18 O -0.55 0.32 12.75 -35.23 -0.45 -0.13 16 19 Si 0.68 -1.33 29.82 -169.99 -5.07 -6.40 16 20 C -0.03 -0.07 9.75 -39.26 -0.38 -0.45 16 21 C -0.02 -0.05 7.35 -39.09 -0.29 -0.34 16 22 F -0.13 -0.36 16.65 2.25 0.04 -0.32 16 23 C -0.14 0.31 6.51 -25.92 -0.17 0.15 16 24 H 0.06 -0.12 6.55 -51.93 -0.34 -0.46 16 25 H 0.05 -0.01 6.69 -51.93 -0.35 -0.36 16 26 H 0.10 -0.18 8.14 -51.93 -0.42 -0.60 16 27 H 0.12 -0.28 7.02 -51.93 -0.36 -0.65 16 28 H 0.10 -0.07 8.10 -51.93 -0.42 -0.49 16 29 H 0.09 0.12 6.12 -51.93 -0.32 -0.19 16 30 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 31 H 0.41 -0.37 7.94 -40.82 -0.32 -0.69 16 32 H 0.15 0.24 4.88 -52.48 -0.26 -0.02 16 33 H 0.08 -0.20 7.96 -51.93 -0.41 -0.62 16 34 H 0.38 -2.15 8.74 45.56 0.40 -1.76 16 35 H -0.25 -0.06 7.11 56.52 0.40 0.34 16 36 H -0.25 -0.31 7.11 56.52 0.40 0.09 16 37 H 0.15 0.08 8.06 -52.48 -0.42 -0.34 16 38 H 0.10 -0.26 6.63 -51.93 -0.34 -0.60 16 39 H 0.11 -0.33 8.04 -51.93 -0.42 -0.75 16 LS Contribution 335.51 15.07 5.06 5.06 Total: 0.00 -6.88 335.51 -7.24 -14.13 By element: Atomic # 1 Polarization: -4.24 SS G_CDS: -4.04 Total: -8.28 kcal Atomic # 6 Polarization: 2.41 SS G_CDS: -2.13 Total: 0.28 kcal Atomic # 7 Polarization: -2.27 SS G_CDS: -0.46 Total: -2.74 kcal Atomic # 8 Polarization: 0.02 SS G_CDS: -0.74 Total: -0.73 kcal Atomic # 9 Polarization: -1.47 SS G_CDS: 0.15 Total: -1.32 kcal Atomic # 14 Polarization: -1.33 SS G_CDS: -5.07 Total: -6.40 kcal Total LS contribution 5.06 Total: 5.06 kcal Total: -6.88 -7.24 -14.13 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17317798_17656566.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -173.450 kcal (2) G-P(sol) polarization free energy of solvation -6.884 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -180.334 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.242 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.125 kcal (6) G-S(sol) free energy of system = (1) + (5) -187.576 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds