Wall clock time and date at job start Mon Mar 8 2021 10:14:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34226 * 117.00200 * 2 1 4 4 O 1.20830 * 120.00272 * 0.02562 * 3 2 1 5 5 C 1.50698 * 119.99876 * 180.02562 * 3 2 1 6 6 C 1.53008 * 109.47036 * 180.02562 * 5 3 2 7 7 H 1.08997 * 112.84642 * 316.19118 * 6 5 3 8 8 C 1.53778 * 113.61328 * 87.50049 * 6 5 3 9 9 C 1.53791 * 87.07824 * 139.98237 * 8 6 5 10 10 H 1.08993 * 113.68748 * 89.12568 * 9 8 6 11 11 N 1.46502 * 113.61102 * 220.01919 * 9 8 6 12 12 C 1.38408 * 119.99469 * 252.49522 * 11 9 8 13 13 N 1.32494 * 119.21229 * 180.02562 * 12 11 9 14 14 C 1.32282 * 120.74101 * 179.97438 * 13 12 11 15 15 C 1.38604 * 119.19157 * 0.02562 * 14 13 12 16 16 C 1.50711 * 120.71576 * 180.02562 * 15 14 13 17 17 O 1.42896 * 109.47004 * 244.97554 * 16 15 14 18 18 Si 1.86299 * 109.47132 * 4.98098 * 16 15 14 19 19 C 1.38603 * 118.56551 * 359.97438 * 15 14 13 20 20 N 1.32281 * 119.19194 * 0.02562 * 19 15 14 21 21 C 1.53778 * 87.08067 * 334.56512 * 9 8 6 22 22 H 1.08992 * 109.47331 * 180.02562 * 1 2 3 23 23 H 1.09004 * 109.46816 * 300.00549 * 1 2 3 24 24 H 1.08999 * 109.47262 * 59.99677 * 1 2 3 25 25 H 1.08994 * 109.47503 * 60.00332 * 5 3 2 26 26 H 1.09003 * 109.47251 * 299.99557 * 5 3 2 27 27 H 1.08991 * 113.61718 * 25.43500 * 8 6 5 28 28 H 1.08999 * 113.61299 * 254.52915 * 8 6 5 29 29 H 0.96994 * 120.00176 * 72.50138 * 11 9 8 30 30 H 1.07992 * 120.39987 * 179.97438 * 14 13 12 31 31 H 1.09006 * 109.46390 * 124.97677 * 16 15 14 32 32 H 0.96707 * 113.99829 * 180.02562 * 17 16 15 33 33 H 1.48498 * 110.00030 * 299.99743 * 18 16 15 34 34 H 1.48502 * 110.00080 * 61.31430 * 18 16 15 35 35 H 1.07993 * 120.40362 * 179.97438 * 19 15 14 36 36 H 1.08999 * 113.61734 * 139.97880 * 21 9 8 37 37 H 1.08995 * 113.61782 * 270.80244 * 21 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2094 0.0005 5 6 3.5663 1.2747 -0.0006 6 6 4.0002 2.7420 0.0002 7 1 3.4248 3.3538 -0.6945 8 6 4.1166 3.3492 1.4082 9 6 5.3820 4.0664 0.9087 10 1 5.1856 5.0417 0.4634 11 7 6.4658 4.0986 1.8940 12 6 6.7846 5.2840 2.5334 13 7 7.7679 5.2955 3.4213 14 6 8.0984 6.4116 4.0499 15 6 7.4018 7.5767 3.7699 16 6 7.7498 8.8677 4.4654 17 8 6.6520 9.2797 5.2820 18 14 9.2557 8.6120 5.5321 19 6 6.3790 7.5292 2.8357 20 7 6.0994 6.3801 2.2431 21 6 5.5210 2.9347 -0.1231 22 1 -0.3633 -1.0276 0.0005 23 1 -0.3633 0.5139 0.8900 24 1 -0.3634 0.5139 -0.8899 25 1 3.9557 0.7809 -0.8908 26 1 3.9564 0.7805 0.8892 27 1 4.3112 2.6119 2.1870 28 1 3.3011 4.0271 1.6601 29 1 6.9599 3.2893 2.0980 30 1 8.9005 6.4146 4.7729 31 1 7.9579 9.6365 3.7213 32 1 6.8060 10.1060 5.7604 33 1 8.9849 7.5659 6.5507 34 1 10.4126 8.2139 4.6905 35 1 5.8166 8.4192 2.5953 36 1 5.8391 3.2780 -1.1075 37 1 6.1007 2.0847 0.2365 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_17321984_12175864.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:14:17 Heat of formation + Delta-G solvation = -27.725755 kcal Electronic energy + Delta-G solvation = -21134.429640 eV Core-core repulsion = 17687.038536 eV Total energy + Delta-G solvation = -3447.391105 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 280.126 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -42.09070 -41.54510 -40.18898 -37.97348 -37.41095 -35.78926 -34.66143 -32.70818 -31.24619 -28.45662 -26.83310 -26.67243 -25.91695 -24.23450 -22.90963 -21.73662 -20.76390 -19.19329 -18.88827 -18.49959 -18.36412 -17.65291 -17.48931 -16.61961 -16.31666 -16.26519 -16.02660 -15.67089 -15.22488 -14.95936 -14.68437 -14.46589 -14.09962 -13.91384 -13.63492 -13.43771 -13.15331 -13.02269 -12.93164 -12.29336 -12.14624 -11.97999 -11.81851 -11.75319 -11.72404 -11.44920 -11.39813 -11.12673 -10.56916 -9.94140 -9.06514 -5.05704 0.07306 0.18165 1.21803 1.25033 1.58329 1.69897 1.86985 1.90040 2.79796 3.14942 3.35415 3.38312 3.40543 3.52595 3.64241 3.77339 3.78891 3.86849 3.90055 4.14082 4.17800 4.20899 4.24892 4.31029 4.42932 4.46417 4.59870 4.60949 4.68942 4.72882 4.80737 4.97716 5.05307 5.11887 5.38470 5.45800 5.79344 6.06650 6.40560 6.59036 6.78112 7.31350 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.363 6.363 3 C 0.459 3.541 4 O -0.503 6.503 5 C -0.103 4.103 6 C -0.098 4.098 7 H 0.108 0.892 8 C -0.148 4.148 9 C 0.139 3.861 10 H 0.122 0.878 11 N -0.684 5.684 12 C 0.568 3.432 13 N -0.566 5.566 14 C 0.195 3.805 15 C -0.249 4.249 16 C -0.050 4.050 17 O -0.548 6.548 18 Si 0.680 3.320 19 C 0.226 3.774 20 N -0.563 5.563 21 C -0.141 4.141 22 H 0.102 0.898 23 H 0.063 0.937 24 H 0.064 0.936 25 H 0.110 0.890 26 H 0.107 0.893 27 H 0.084 0.916 28 H 0.078 0.922 29 H 0.414 0.586 30 H 0.158 0.842 31 H 0.076 0.924 32 H 0.383 0.617 33 H -0.249 1.249 34 H -0.253 1.253 35 H 0.172 0.828 36 H 0.082 0.918 37 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.035 1.297 -0.078 2.414 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.279 6.279 3 C 0.301 3.699 4 O -0.390 6.390 5 C -0.140 4.140 6 C -0.117 4.117 7 H 0.126 0.874 8 C -0.187 4.187 9 C 0.034 3.966 10 H 0.140 0.860 11 N -0.319 5.319 12 C 0.211 3.789 13 N -0.288 5.288 14 C 0.028 3.972 15 C -0.257 4.257 16 C -0.162 4.162 17 O -0.354 6.354 18 Si 0.581 3.419 19 C 0.058 3.942 20 N -0.285 5.285 21 C -0.179 4.179 22 H 0.121 0.879 23 H 0.082 0.918 24 H 0.082 0.918 25 H 0.128 0.872 26 H 0.126 0.874 27 H 0.103 0.897 28 H 0.096 0.904 29 H 0.252 0.748 30 H 0.174 0.826 31 H 0.094 0.906 32 H 0.231 0.769 33 H -0.173 1.173 34 H -0.177 1.177 35 H 0.189 0.811 36 H 0.100 0.900 37 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges 1.776 -0.429 -0.662 1.944 hybrid contribution -0.157 0.305 0.159 0.378 sum 1.620 -0.125 -0.504 1.701 Atomic orbital electron populations 1.23297 0.75964 1.03915 1.02699 1.86506 1.23776 1.33554 1.84089 1.23816 0.92291 0.81386 0.72373 1.90694 1.67235 1.36294 1.44818 1.21409 0.87607 0.98911 1.06098 1.22230 0.96063 0.94158 0.99229 0.87352 1.23611 0.98509 1.00233 0.96353 1.22538 0.85633 1.00008 0.88438 0.85973 1.44213 1.37825 1.07034 1.42832 1.19425 0.85792 0.87079 0.86595 1.67890 1.18649 1.30041 1.12200 1.22589 0.95021 0.86650 0.92983 1.20720 1.03728 0.96439 1.04825 1.24304 0.99034 0.94830 0.98058 1.86498 1.39901 1.45759 1.63254 0.95088 0.76272 0.88405 0.82102 1.22856 0.89944 0.94686 0.86735 1.68001 1.30893 0.99055 1.30555 1.23466 0.95727 0.98674 1.00060 0.87931 0.91798 0.91756 0.87166 0.87450 0.89730 0.90355 0.74795 0.82573 0.90613 0.76868 1.17345 1.17736 0.81068 0.89974 0.89094 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 101.05 1.07 1.06 16 2 O -0.36 -0.56 10.56 -39.25 -0.41 -0.98 16 3 C 0.46 0.80 7.96 36.00 0.29 1.09 16 4 O -0.50 -2.40 15.51 -18.75 -0.29 -2.69 16 5 C -0.10 0.17 5.65 -27.88 -0.16 0.01 16 6 C -0.10 0.10 3.15 -89.80 -0.28 -0.18 16 7 H 0.11 0.02 7.68 -51.93 -0.40 -0.38 16 8 C -0.15 -0.03 7.43 -25.92 -0.19 -0.23 16 9 C 0.14 0.02 4.25 -67.11 -0.29 -0.27 16 10 H 0.12 0.17 7.37 -51.93 -0.38 -0.22 16 11 N -0.68 -0.97 5.50 -55.00 -0.30 -1.28 16 12 C 0.57 2.36 8.42 -322.81 -2.72 -0.36 16 13 N -0.57 -2.70 10.46 -13.93 -0.15 -2.85 16 14 C 0.20 0.69 9.92 -17.22 -0.17 0.52 16 15 C -0.25 -0.59 5.40 -104.35 -0.56 -1.15 16 16 C -0.05 0.04 2.82 36.01 0.10 0.14 16 17 O -0.55 0.27 12.82 -35.23 -0.45 -0.18 16 18 Si 0.68 -1.15 29.92 -169.99 -5.09 -6.24 16 19 C 0.23 0.60 10.99 -17.22 -0.19 0.41 16 20 N -0.56 -2.32 9.13 -13.93 -0.13 -2.44 16 21 C -0.14 0.30 7.39 -25.92 -0.19 0.11 16 22 H 0.10 -0.26 8.14 -51.93 -0.42 -0.69 16 23 H 0.06 0.00 8.13 -51.93 -0.42 -0.42 16 24 H 0.06 -0.01 8.13 -51.93 -0.42 -0.43 16 25 H 0.11 -0.37 8.14 -51.93 -0.42 -0.80 16 26 H 0.11 -0.32 7.84 -51.93 -0.41 -0.73 16 27 H 0.08 -0.01 7.89 -51.93 -0.41 -0.42 16 28 H 0.08 0.16 8.14 -51.93 -0.42 -0.26 16 29 H 0.41 -0.02 8.84 -40.82 -0.36 -0.38 16 30 H 0.16 0.34 5.04 -52.49 -0.26 0.07 16 31 H 0.08 -0.21 7.96 -51.93 -0.41 -0.62 16 32 H 0.38 -2.13 8.74 45.56 0.40 -1.73 16 33 H -0.25 -0.37 7.06 56.52 0.40 0.03 16 34 H -0.25 -0.20 7.11 56.52 0.40 0.21 16 35 H 0.17 0.02 8.06 -52.49 -0.42 -0.40 16 36 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 37 H 0.09 -0.30 8.08 -51.93 -0.42 -0.72 16 LS Contribution 318.35 15.07 4.80 4.80 Total: 0.00 -9.06 318.35 -10.14 -19.20 By element: Atomic # 1 Polarization: -3.69 SS G_CDS: -4.82 Total: -8.51 kcal Atomic # 6 Polarization: 4.46 SS G_CDS: -3.30 Total: 1.16 kcal Atomic # 7 Polarization: -5.99 SS G_CDS: -0.58 Total: -6.57 kcal Atomic # 8 Polarization: -2.69 SS G_CDS: -1.16 Total: -3.85 kcal Atomic # 14 Polarization: -1.15 SS G_CDS: -5.09 Total: -6.24 kcal Total LS contribution 4.80 Total: 4.80 kcal Total: -9.06 -10.14 -19.20 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17321984_12175864.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -8.528 kcal (2) G-P(sol) polarization free energy of solvation -9.062 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -17.590 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.136 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.198 kcal (6) G-S(sol) free energy of system = (1) + (5) -27.726 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds