Wall clock time and date at job start Mon Mar 8 2021 10:14:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45205 * 1 3 3 C 1.34224 * 116.99991 * 2 1 4 4 O 1.20832 * 120.00248 * 0.02562 * 3 2 1 5 5 C 1.50699 * 120.00013 * 180.02562 * 3 2 1 6 6 C 1.53009 * 109.47066 * 180.02562 * 5 3 2 7 7 H 1.09000 * 112.90634 * 43.75141 * 6 5 3 8 8 C 1.53778 * 113.61084 * 175.00046 * 6 5 3 9 9 C 1.53779 * 87.07820 * 139.98333 * 8 6 5 10 10 H 1.09000 * 113.61970 * 89.20295 * 9 8 6 11 11 N 1.46503 * 113.61329 * 220.01794 * 9 8 6 12 12 C 1.39140 * 120.00296 * 205.00235 * 11 9 8 13 13 N 1.32340 * 119.71867 * 0.21656 * 12 11 9 14 14 C 1.32006 * 121.64683 * 180.26877 * 13 12 11 15 15 C 1.37982 * 120.90187 * 359.77403 * 14 13 12 16 16 C 1.50697 * 120.32613 * 179.97438 * 15 14 13 17 17 O 1.42897 * 109.47579 * 244.98123 * 16 15 14 18 18 Si 1.86299 * 109.47243 * 4.98144 * 16 15 14 19 19 C 1.38904 * 119.34805 * 359.97438 * 15 14 13 20 20 C 1.38439 * 118.48364 * 0.02562 * 19 15 14 21 21 F 1.35104 * 120.47218 * 179.97438 * 20 19 15 22 22 C 1.53772 * 113.61307 * 272.49651 * 6 5 3 23 23 H 1.08998 * 109.47359 * 59.99765 * 1 2 3 24 24 H 1.08994 * 109.46859 * 179.97438 * 1 2 3 25 25 H 1.09001 * 109.46740 * 299.99692 * 1 2 3 26 26 H 1.08995 * 109.47363 * 60.00477 * 5 3 2 27 27 H 1.09003 * 109.47079 * 300.00383 * 5 3 2 28 28 H 1.08993 * 113.61824 * 25.43001 * 8 6 5 29 29 H 1.09006 * 113.68791 * 254.53939 * 8 6 5 30 30 H 0.97007 * 120.00201 * 24.99754 * 11 9 8 31 31 H 1.08006 * 119.54803 * 179.75710 * 14 13 12 32 32 H 1.09007 * 109.47134 * 124.98088 * 16 15 14 33 33 H 0.96699 * 113.99821 * 59.99352 * 17 16 15 34 34 H 1.48500 * 110.00140 * 179.97438 * 18 16 15 35 35 H 1.48494 * 109.99976 * 301.31813 * 18 16 15 36 36 H 1.07997 * 120.75505 * 179.97438 * 19 15 14 37 37 H 1.09005 * 113.61607 * 105.47555 * 22 6 5 38 38 H 1.09004 * 113.61606 * 334.57052 * 22 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2094 0.0005 5 6 3.5663 1.2748 -0.0006 6 6 4.0002 2.7421 0.0002 7 1 3.4252 3.3542 0.6952 8 6 5.5209 2.9347 0.1225 9 6 5.3810 4.0677 -0.9078 10 1 5.1851 5.0425 -0.4611 11 7 6.4640 4.1013 -1.8939 12 6 6.7841 5.2937 -2.5355 13 7 6.1095 6.3952 -2.2476 14 6 6.3776 7.5456 -2.8369 15 6 7.3818 7.6424 -3.7783 16 6 7.6765 8.9622 -4.4435 17 8 7.3837 8.8682 -5.8390 18 14 6.6229 10.2933 -3.6762 19 6 8.1184 6.5115 -4.1067 20 6 7.8150 5.3189 -3.4727 21 9 8.5055 4.1942 -3.7619 22 6 4.1153 3.3511 -1.4071 23 1 -0.3634 0.5138 -0.8899 24 1 -0.3633 -1.0276 -0.0005 25 1 -0.3633 0.5138 0.8900 26 1 3.9557 0.7810 -0.8908 27 1 3.9564 0.7805 0.8891 28 1 6.0992 2.0846 -0.2392 29 1 5.8413 3.2766 1.1067 30 1 6.9580 3.2921 -2.0995 31 1 5.8029 8.4229 -2.5790 32 1 8.7296 9.2097 -4.3090 33 1 6.4620 8.6500 -6.0336 34 1 6.9046 11.6000 -4.3231 35 1 5.1854 9.9519 -3.8248 36 1 8.9092 6.5614 -4.8406 37 1 3.2996 4.0294 -1.6575 38 1 4.3093 2.6147 -2.1870 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_17321984_17656566.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:14:27 Heat of formation + Delta-G solvation = -91.449910 kcal Electronic energy + Delta-G solvation = -23402.235726 eV Core-core repulsion = 19548.053270 eV Total energy + Delta-G solvation = -3854.182456 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 297.121 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -49.85668 -41.68604 -41.34588 -40.13821 -38.09255 -37.41307 -35.70424 -33.23215 -32.16422 -30.80615 -28.45373 -26.82399 -26.60645 -25.42018 -23.78759 -22.87462 -21.70238 -20.78088 -19.26970 -18.61226 -18.51429 -18.31402 -17.71689 -17.54062 -17.45761 -16.94951 -16.39504 -16.20615 -16.10141 -15.83116 -15.46232 -15.20802 -14.63994 -14.49623 -14.33609 -13.98416 -13.88464 -13.63424 -13.46589 -13.40830 -13.02422 -12.94223 -12.67225 -12.15636 -12.04087 -11.95018 -11.76339 -11.44732 -11.41101 -11.14348 -10.75369 -10.61881 -10.51934 -8.75538 -5.00272 -0.05285 0.13398 1.22433 1.23731 1.54677 1.71011 1.92862 2.00148 2.55590 3.05480 3.24842 3.34610 3.38251 3.40440 3.56716 3.67035 3.76800 3.84612 3.86290 3.99507 4.16482 4.21362 4.23958 4.29738 4.41984 4.43699 4.48569 4.59207 4.59877 4.69098 4.71718 4.76136 4.97448 5.00221 5.04092 5.21916 5.42511 5.48361 5.96919 6.19079 6.35962 6.76828 6.96887 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.363 6.363 3 C 0.459 3.541 4 O -0.504 6.504 5 C -0.103 4.103 6 C -0.098 4.098 7 H 0.108 0.892 8 C -0.142 4.142 9 C 0.137 3.863 10 H 0.122 0.878 11 N -0.706 5.706 12 C 0.391 3.609 13 N -0.512 5.512 14 C 0.147 3.853 15 C -0.208 4.208 16 C -0.061 4.061 17 O -0.530 6.530 18 Si 0.683 3.317 19 C -0.037 4.037 20 C -0.022 4.022 21 F -0.134 7.134 22 C -0.149 4.149 23 H 0.063 0.937 24 H 0.102 0.898 25 H 0.064 0.936 26 H 0.107 0.893 27 H 0.110 0.890 28 H 0.089 0.911 29 H 0.081 0.919 30 H 0.412 0.588 31 H 0.163 0.837 32 H 0.120 0.880 33 H 0.376 0.624 34 H -0.254 1.254 35 H -0.256 1.256 36 H 0.149 0.851 37 H 0.077 0.923 38 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.625 -1.822 2.809 3.406 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.279 6.279 3 C 0.301 3.699 4 O -0.391 6.391 5 C -0.140 4.140 6 C -0.117 4.117 7 H 0.126 0.874 8 C -0.181 4.181 9 C 0.032 3.968 10 H 0.140 0.860 11 N -0.337 5.337 12 C 0.153 3.847 13 N -0.228 5.228 14 C -0.010 4.010 15 C -0.214 4.214 16 C -0.172 4.172 17 O -0.336 6.336 18 Si 0.584 3.416 19 C -0.063 4.063 20 C -0.048 4.048 21 F -0.113 7.113 22 C -0.188 4.188 23 H 0.082 0.918 24 H 0.121 0.879 25 H 0.082 0.918 26 H 0.125 0.875 27 H 0.128 0.872 28 H 0.107 0.893 29 H 0.100 0.900 30 H 0.249 0.751 31 H 0.180 0.820 32 H 0.138 0.862 33 H 0.224 0.776 34 H -0.179 1.179 35 H -0.181 1.181 36 H 0.167 0.833 37 H 0.096 0.904 38 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -0.379 -0.861 3.374 3.502 hybrid contribution 0.257 -1.137 -1.771 2.120 sum -0.122 -1.998 1.603 2.564 Atomic orbital electron populations 1.23297 0.75966 1.03918 1.02692 1.86508 1.23773 1.33562 1.84082 1.23823 0.92301 0.81381 0.72360 1.90693 1.67238 1.36298 1.44839 1.21413 0.87583 0.98979 1.06062 1.22235 0.96128 0.94079 0.99280 0.87391 1.23461 0.95652 0.98747 1.00193 1.22488 0.85893 0.99844 0.88621 0.85980 1.44622 1.38243 1.07346 1.43538 1.18479 0.88995 0.88129 0.89093 1.67304 1.28880 0.97865 1.28785 1.22407 0.93407 0.94439 0.90771 1.20852 1.00517 0.97069 1.02943 1.24825 1.08529 0.99137 0.84709 1.86613 1.32954 1.92373 1.21692 0.95062 0.78792 0.77638 0.90087 1.21285 0.98423 0.89827 0.96806 1.18012 0.98186 0.84645 1.03959 1.91491 1.78035 1.49044 1.92722 1.23605 0.98639 1.00220 0.96301 0.91807 0.87936 0.91751 0.87491 0.87200 0.89257 0.90007 0.75061 0.82005 0.86236 0.77589 1.17859 1.18099 0.83345 0.90442 0.89860 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.44 10.57 -39.24 -0.41 -0.85 16 3 C 0.46 0.62 7.96 36.01 0.29 0.91 16 4 O -0.50 -2.18 15.51 -18.75 -0.29 -2.47 16 5 C -0.10 0.21 5.65 -27.88 -0.16 0.06 16 6 C -0.10 0.16 3.15 -89.81 -0.28 -0.12 16 7 H 0.11 -0.04 7.68 -51.93 -0.40 -0.44 16 8 C -0.14 0.40 7.39 -25.92 -0.19 0.21 16 9 C 0.14 -0.13 4.27 -67.12 -0.29 -0.41 16 10 H 0.12 0.02 7.40 -51.93 -0.38 -0.37 16 11 N -0.71 0.18 5.51 -53.06 -0.29 -0.11 16 12 C 0.39 0.60 7.49 -154.86 -1.16 -0.56 16 13 N -0.51 -0.89 9.13 -12.36 -0.11 -1.00 16 14 C 0.15 0.02 9.84 -17.57 -0.17 -0.16 16 15 C -0.21 0.04 5.36 -104.47 -0.56 -0.52 16 16 C -0.06 0.06 2.82 36.00 0.10 0.16 16 17 O -0.53 -0.32 12.84 -35.23 -0.45 -0.77 16 18 Si 0.68 -1.19 29.91 -169.99 -5.08 -6.28 16 19 C -0.04 -0.02 9.82 -39.26 -0.39 -0.41 16 20 C -0.02 -0.03 7.35 -39.09 -0.29 -0.32 16 21 F -0.13 -0.28 16.65 2.25 0.04 -0.24 16 22 C -0.15 0.09 7.43 -25.93 -0.19 -0.10 16 23 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 24 H 0.10 -0.29 8.14 -51.93 -0.42 -0.72 16 25 H 0.06 -0.03 8.13 -51.93 -0.42 -0.45 16 26 H 0.11 -0.36 7.84 -51.93 -0.41 -0.77 16 27 H 0.11 -0.41 8.14 -51.93 -0.42 -0.83 16 28 H 0.09 -0.34 8.08 -51.93 -0.42 -0.76 16 29 H 0.08 -0.24 8.14 -51.93 -0.42 -0.67 16 30 H 0.41 -0.62 8.20 -40.82 -0.33 -0.95 16 31 H 0.16 -0.31 4.84 -52.48 -0.25 -0.56 16 32 H 0.12 -0.22 7.96 -51.93 -0.41 -0.63 16 33 H 0.38 -0.79 8.70 45.56 0.40 -0.39 16 34 H -0.25 -0.42 7.11 56.52 0.40 -0.02 16 35 H -0.26 -0.02 7.01 56.52 0.40 0.38 16 36 H 0.15 -0.04 8.06 -52.49 -0.42 -0.46 16 37 H 0.08 0.09 8.14 -51.93 -0.42 -0.33 16 38 H 0.08 -0.08 7.90 -51.93 -0.41 -0.49 16 LS Contribution 328.79 15.07 4.95 4.95 Total: 0.00 -7.25 328.79 -8.66 -15.91 By element: Atomic # 1 Polarization: -4.12 SS G_CDS: -4.79 Total: -8.91 kcal Atomic # 6 Polarization: 2.00 SS G_CDS: -2.22 Total: -0.23 kcal Atomic # 7 Polarization: -0.71 SS G_CDS: -0.41 Total: -1.11 kcal Atomic # 8 Polarization: -2.94 SS G_CDS: -1.16 Total: -4.10 kcal Atomic # 9 Polarization: -0.28 SS G_CDS: 0.04 Total: -0.24 kcal Atomic # 14 Polarization: -1.19 SS G_CDS: -5.08 Total: -6.28 kcal Total LS contribution 4.95 Total: 4.95 kcal Total: -7.25 -8.66 -15.91 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17321984_17656566.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -75.541 kcal (2) G-P(sol) polarization free energy of solvation -7.246 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -82.787 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.663 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.909 kcal (6) G-S(sol) free energy of system = (1) + (5) -91.450 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds