Wall clock time and date at job start Mon Mar 8 2021 10:26:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 N 1.30177 * 126.80131 * 2 1 4 4 O 1.20916 * 111.60351 * 179.75704 * 3 2 1 5 5 C 1.34042 * 111.56820 * 0.45692 * 4 3 2 6 6 C 1.50699 * 126.77765 * 179.82970 * 5 4 3 7 7 O 1.42899 * 109.46785 * 269.67776 * 6 5 4 8 8 C 1.42905 * 113.99778 * 179.97438 * 7 6 5 9 9 H 1.09001 * 109.46882 * 30.00382 * 8 7 6 10 10 C 1.53005 * 109.46802 * 150.00013 * 8 7 6 11 11 C 1.52997 * 109.46625 * 179.97438 * 10 8 7 12 12 C 1.52998 * 109.47463 * 299.99969 * 11 10 8 13 13 H 1.08996 * 109.47025 * 299.99990 * 12 11 10 14 14 N 1.46506 * 109.46919 * 180.02562 * 12 11 10 15 15 C 1.38408 * 119.99608 * 155.00188 * 14 12 11 16 16 N 1.32490 * 119.21815 * 359.73201 * 15 14 12 17 17 C 1.32278 * 120.74275 * 179.72044 * 16 15 14 18 18 C 1.38604 * 119.19446 * 0.53929 * 17 16 15 19 19 C 1.50695 * 120.72465 * 179.75383 * 18 17 16 20 20 O 1.42896 * 109.47307 * 244.98190 * 19 18 17 21 21 Si 1.86297 * 109.46975 * 4.98115 * 19 18 17 22 22 C 1.38610 * 118.55942 * 359.73651 * 18 17 16 23 23 N 1.32279 * 119.19216 * 359.97438 * 22 18 17 24 24 C 1.53000 * 109.46862 * 60.00479 * 12 11 10 25 25 C 1.52996 * 109.46880 * 299.99653 * 24 12 11 26 26 C 1.35454 * 106.44182 * 359.55898 * 5 4 3 27 27 H 1.08992 * 109.47300 * 269.95736 * 1 2 3 28 28 H 1.09002 * 109.46976 * 29.95734 * 1 2 3 29 29 H 1.09006 * 109.46973 * 149.95420 * 1 2 3 30 30 H 1.08997 * 109.47198 * 149.67877 * 6 5 4 31 31 H 1.08997 * 109.47040 * 29.67911 * 6 5 4 32 32 H 1.09001 * 109.47197 * 300.00193 * 10 8 7 33 33 H 1.09001 * 109.47101 * 60.00502 * 10 8 7 34 34 H 1.08996 * 109.47546 * 60.00745 * 11 10 8 35 35 H 1.09010 * 109.46766 * 180.02562 * 11 10 8 36 36 H 0.96994 * 120.00423 * 335.00139 * 14 12 11 37 37 H 1.08000 * 120.40751 * 180.29884 * 17 16 15 38 38 H 1.09002 * 109.47491 * 124.97658 * 19 18 17 39 39 H 0.96701 * 114.00435 * 60.00324 * 20 19 18 40 40 H 1.48498 * 110.00454 * 180.02562 * 21 19 18 41 41 H 1.48504 * 109.99872 * 301.31682 * 21 19 18 42 42 H 1.07994 * 120.40512 * 179.97438 * 22 18 17 43 43 H 1.09001 * 109.47347 * 59.99600 * 24 12 11 44 44 H 1.09001 * 109.46885 * 179.97438 * 24 12 11 45 45 H 1.09004 * 109.47584 * 300.00100 * 25 24 12 46 46 H 1.08997 * 109.47205 * 180.02562 * 25 24 12 47 47 H 1.08000 * 128.00207 * 180.24815 * 26 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2868 1.0424 0.0000 4 8 3.4537 0.7254 0.0048 5 6 3.6025 -0.6068 -0.0013 6 6 4.9022 -1.3695 -0.0017 7 8 5.3125 -1.6106 -1.3491 8 6 6.5414 -2.3311 -1.4623 9 1 6.6549 -2.9930 -0.6038 10 6 6.5295 -3.1607 -2.7479 11 6 7.8455 -3.9316 -2.8694 12 6 9.0133 -2.9439 -2.9105 13 1 8.8993 -2.2821 -3.7691 14 7 10.2733 -3.6822 -3.0275 15 6 11.3826 -3.0732 -3.5880 16 7 11.2862 -1.8239 -4.0186 17 6 12.3288 -1.2109 -4.5542 18 6 13.5283 -1.8953 -4.6722 19 6 14.7363 -1.2322 -5.2820 20 8 15.0833 -1.8993 -6.4971 21 14 14.3483 0.5538 -5.6431 22 6 13.5928 -3.2029 -4.2168 23 7 12.5144 -3.7550 -3.6858 24 6 9.0251 -2.1144 -1.6250 25 6 7.7092 -1.3434 -1.5035 26 6 2.3539 -1.1320 -0.0008 27 1 -0.3633 -0.0008 1.0276 28 1 -0.3633 0.8904 -0.5132 29 1 -0.3633 -0.8896 -0.5146 30 1 4.7653 -2.3209 0.5122 31 1 5.6661 -0.7858 0.5119 32 1 5.6973 -3.8640 -2.7188 33 1 6.4161 -2.4988 -3.6064 34 1 7.9595 -4.5935 -2.0110 35 1 7.8372 -4.5223 -3.7855 36 1 10.3301 -4.5977 -2.7122 37 1 12.2455 -0.1908 -4.8990 38 1 15.5725 -1.2885 -4.5850 39 1 14.3843 -1.8886 -7.1653 40 1 15.5314 1.2190 -6.2454 41 1 13.1896 0.6449 -6.5675 42 1 14.5123 -3.7640 -4.2944 43 1 9.1390 -2.7763 -0.7665 44 1 9.8574 -1.4111 -1.6541 45 1 7.5952 -0.6815 -2.3620 46 1 7.7178 -0.7521 -0.5879 47 1 2.0709 -2.1742 -0.0010 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_17322388_12175864.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:26:41 Heat of formation + Delta-G solvation = 46.096566 kcal Electronic energy + Delta-G solvation = -29496.996615 eV Core-core repulsion = 25264.315638 eV Total energy + Delta-G solvation = -4232.680977 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 347.168 amu Computer time = 1.28 seconds Orbital eigenvalues (eV) -45.98552 -42.12238 -40.43522 -38.60563 -37.90334 -35.82742 -35.60999 -34.72036 -33.57573 -32.40229 -31.82675 -29.64905 -29.53666 -27.52377 -26.39892 -25.81030 -24.13518 -23.80477 -23.41685 -22.58228 -21.36483 -20.98341 -19.35981 -18.82975 -18.72199 -18.39688 -18.13019 -17.66104 -16.87542 -16.59102 -16.33520 -16.17107 -16.05768 -15.79402 -15.67616 -15.22468 -14.91326 -14.67517 -14.59188 -14.24334 -14.14347 -14.08109 -14.01503 -13.80870 -13.39399 -13.24206 -13.17981 -13.12675 -12.57495 -12.36945 -12.22671 -12.16389 -12.09247 -11.90972 -11.73495 -11.60628 -11.50141 -11.16022 -11.01179 -10.68754 -10.58017 -10.45141 -10.04293 -9.09980 -4.91654 0.05694 0.14794 0.30216 1.17626 1.31525 1.59188 1.80964 1.97185 1.98781 2.79580 2.81873 3.16952 3.23275 3.43035 3.45279 3.63540 3.67340 3.71931 3.73461 3.79493 3.96506 4.05165 4.09518 4.18586 4.22384 4.24990 4.27401 4.31335 4.43585 4.44369 4.49048 4.56741 4.64019 4.65230 4.65821 4.81270 4.82548 4.86007 4.88118 4.96371 5.08911 5.16295 5.18821 5.20038 5.20362 5.32962 5.41920 5.78725 6.05890 6.16752 6.42470 6.48638 7.21957 7.28947 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 C 0.003 3.997 3 N -0.399 5.399 4 O 0.084 5.916 5 C -0.039 4.039 6 C 0.143 3.857 7 O -0.395 6.395 8 C 0.091 3.909 9 H 0.089 0.911 10 C -0.108 4.108 11 C -0.115 4.115 12 C 0.161 3.839 13 H 0.076 0.924 14 N -0.687 5.687 15 C 0.554 3.446 16 N -0.576 5.576 17 C 0.191 3.809 18 C -0.285 4.285 19 C -0.055 4.055 20 O -0.547 6.547 21 Si 0.756 3.244 22 C 0.214 3.786 23 N -0.589 5.589 24 C -0.116 4.116 25 C -0.135 4.135 26 C -0.208 4.208 27 H 0.093 0.907 28 H 0.071 0.929 29 H 0.103 0.897 30 H 0.116 0.884 31 H 0.086 0.914 32 H 0.084 0.916 33 H 0.062 0.938 34 H 0.089 0.911 35 H 0.077 0.923 36 H 0.419 0.581 37 H 0.183 0.817 38 H 0.132 0.868 39 H 0.385 0.615 40 H -0.299 1.299 41 H -0.281 1.281 42 H 0.183 0.817 43 H 0.075 0.925 44 H 0.056 0.944 45 H 0.061 0.939 46 H 0.073 0.927 47 H 0.202 0.798 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.827 -4.033 3.373 5.322 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.135 4.135 2 C -0.155 4.155 3 N -0.107 5.107 4 O 0.019 5.981 5 C -0.102 4.102 6 C 0.066 3.934 7 O -0.315 6.315 8 C 0.035 3.965 9 H 0.107 0.893 10 C -0.146 4.146 11 C -0.153 4.153 12 C 0.056 3.944 13 H 0.094 0.906 14 N -0.323 5.323 15 C 0.197 3.803 16 N -0.299 5.299 17 C 0.024 3.976 18 C -0.293 4.293 19 C -0.165 4.165 20 O -0.355 6.355 21 Si 0.662 3.338 22 C 0.046 3.954 23 N -0.312 5.312 24 C -0.155 4.155 25 C -0.173 4.173 26 C -0.229 4.229 27 H 0.111 0.889 28 H 0.090 0.910 29 H 0.122 0.878 30 H 0.134 0.866 31 H 0.104 0.896 32 H 0.103 0.897 33 H 0.081 0.919 34 H 0.108 0.892 35 H 0.096 0.904 36 H 0.257 0.743 37 H 0.199 0.801 38 H 0.150 0.850 39 H 0.234 0.766 40 H -0.227 1.227 41 H -0.207 1.207 42 H 0.200 0.800 43 H 0.093 0.907 44 H 0.075 0.925 45 H 0.079 0.921 46 H 0.092 0.908 47 H 0.219 0.781 Dipole moment (debyes) X Y Z Total from point charges -1.683 -2.511 3.355 4.516 hybrid contribution 0.715 -1.192 -1.201 1.837 sum -0.968 -3.703 2.154 4.392 Atomic orbital electron populations 1.20334 0.83895 1.04773 1.04503 1.24294 1.00642 0.88841 1.01741 1.73885 0.89901 1.25729 1.21178 1.84784 1.21537 1.24032 1.67752 1.24610 0.98959 0.83243 1.03430 1.20896 0.88660 0.98563 0.85310 1.87978 1.40965 1.77195 1.25395 1.22299 0.82244 0.92468 0.99536 0.89326 1.21472 0.97605 0.98671 0.96895 1.21711 0.92013 0.97474 1.04135 1.21037 0.81279 0.93464 0.98590 0.90566 1.44327 1.07337 1.16615 1.64016 1.19661 0.86932 0.86002 0.87736 1.67981 1.33135 1.10058 1.18723 1.23188 0.86658 0.99394 0.88390 1.21663 0.98722 0.98480 1.10431 1.24819 0.97604 1.06415 0.87692 1.86587 1.45251 1.77509 1.26113 0.94273 0.76938 0.74478 0.88141 1.23156 0.95493 0.91462 0.85272 1.68011 1.00238 1.39240 1.23671 1.21787 0.97074 0.98932 0.97731 1.21950 0.93812 0.98548 1.03014 1.22892 0.90442 1.02248 1.07322 0.88873 0.90959 0.87787 0.86586 0.89630 0.89721 0.91939 0.89240 0.90385 0.74294 0.80062 0.84990 0.76594 1.22705 1.20743 0.79999 0.90657 0.92496 0.92067 0.90811 0.78090 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 0.11 10.47 71.24 0.75 0.85 16 2 C 0.00 0.02 7.33 43.58 0.32 0.33 16 3 N -0.40 -4.38 12.07 -49.57 -0.60 -4.98 16 4 O 0.08 0.77 11.20 71.62 0.80 1.57 16 5 C -0.04 -0.10 7.12 25.04 0.18 0.08 16 6 C 0.14 -0.55 6.31 71.24 0.45 -0.10 16 7 O -0.40 0.12 9.97 -148.98 -1.49 -1.37 16 8 C 0.09 -0.44 2.61 30.60 0.08 -0.37 16 9 H 0.09 -0.81 7.79 -2.39 -0.02 -0.83 16 10 C -0.11 0.54 5.57 30.59 0.17 0.71 16 11 C -0.12 0.75 5.39 30.59 0.16 0.92 16 12 C 0.16 -0.41 2.45 44.99 0.11 -0.30 16 13 H 0.08 0.12 7.50 -2.39 -0.02 0.10 16 14 N -0.69 0.22 5.22 -330.43 -1.73 -1.51 16 15 C 0.55 2.47 8.40 261.49 2.20 4.66 16 16 N -0.58 -2.46 9.20 -197.99 -1.82 -4.28 16 17 C 0.19 0.08 9.92 84.71 0.84 0.92 16 18 C -0.28 0.22 5.36 -19.69 -0.11 0.11 16 19 C -0.05 0.17 2.83 71.23 0.20 0.37 16 20 O -0.55 -0.11 12.85 -148.98 -1.91 -2.02 16 21 Si 0.76 -2.80 29.95 68.60 2.05 -0.75 16 22 C 0.21 0.32 10.99 84.71 0.93 1.25 16 23 N -0.59 -2.96 10.46 -197.99 -2.07 -5.03 16 24 C -0.12 0.37 5.51 30.59 0.17 0.54 16 25 C -0.13 0.44 5.54 30.59 0.17 0.61 16 26 C -0.21 -0.20 11.06 22.40 0.25 0.05 16 27 H 0.09 -0.34 8.14 -2.39 -0.02 -0.36 16 28 H 0.07 -0.01 8.14 -2.39 -0.02 -0.03 16 29 H 0.10 -0.60 8.14 -2.38 -0.02 -0.62 16 30 H 0.12 -1.16 8.09 -2.39 -0.02 -1.18 16 31 H 0.09 -0.51 7.87 -2.39 -0.02 -0.53 16 32 H 0.08 -0.51 8.14 -2.39 -0.02 -0.53 16 33 H 0.06 -0.11 8.14 -2.39 -0.02 -0.13 16 34 H 0.09 -0.85 8.14 -2.39 -0.02 -0.87 16 35 H 0.08 -0.47 8.14 -2.38 -0.02 -0.49 16 36 H 0.42 -1.24 8.72 -92.71 -0.81 -2.05 16 37 H 0.18 -0.75 5.01 -2.91 -0.01 -0.77 16 38 H 0.13 -0.72 7.96 -2.39 -0.02 -0.74 16 39 H 0.38 -1.79 8.70 -74.06 -0.64 -2.44 16 40 H -0.30 -1.26 7.11 99.48 0.71 -0.55 16 41 H -0.28 -0.03 7.02 99.48 0.70 0.66 16 42 H 0.18 -0.41 8.06 -2.91 -0.02 -0.43 16 43 H 0.07 -0.38 8.14 -2.39 -0.02 -0.40 16 44 H 0.06 0.05 8.14 -2.39 -0.02 0.03 16 45 H 0.06 0.02 8.14 -2.38 -0.02 0.00 16 46 H 0.07 -0.29 7.87 -2.39 -0.02 -0.31 16 47 H 0.20 -1.19 8.06 -2.91 -0.02 -1.22 16 Total: 0.00 -21.08 388.94 -0.31 -21.38 By element: Atomic # 1 Polarization: -13.25 SS G_CDS: -0.41 Total: -13.66 kcal Atomic # 6 Polarization: 3.78 SS G_CDS: 6.87 Total: 10.64 kcal Atomic # 7 Polarization: -9.58 SS G_CDS: -6.22 Total: -15.79 kcal Atomic # 8 Polarization: 0.77 SS G_CDS: -2.60 Total: -1.82 kcal Atomic # 14 Polarization: -2.80 SS G_CDS: 2.05 Total: -0.75 kcal Total: -21.08 -0.31 -21.38 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17322388_12175864.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 67.480 kcal (2) G-P(sol) polarization free energy of solvation -21.079 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 46.402 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.305 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.384 kcal (6) G-S(sol) free energy of system = (1) + (5) 46.097 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.28 seconds