Wall clock time and date at job start Mon Mar 8 2021 10:26:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 N 1.30171 * 126.79981 * 2 1 4 4 O 1.20926 * 111.60307 * 179.97438 * 3 2 1 5 5 C 1.34042 * 111.56707 * 0.02562 * 4 3 2 6 6 C 1.50699 * 126.78010 * 179.97438 * 5 4 3 7 7 O 1.42899 * 109.47122 * 270.02282 * 6 5 4 8 8 C 1.42898 * 114.00015 * 179.97438 * 7 6 5 9 9 H 1.08995 * 109.47058 * 29.99819 * 8 7 6 10 10 C 1.52997 * 109.47199 * 149.99795 * 8 7 6 11 11 C 1.53003 * 109.47241 * 179.97438 * 10 8 7 12 12 C 1.52999 * 109.47087 * 300.00042 * 11 10 8 13 13 H 1.09004 * 109.47434 * 300.00074 * 12 11 10 14 14 N 1.46498 * 109.46963 * 179.97438 * 12 11 10 15 15 C 1.39006 * 119.99551 * 154.72442 * 14 12 11 16 16 N 1.32402 * 119.70089 * 180.27746 * 15 14 12 17 17 C 1.31978 * 121.61929 * 180.02562 * 16 15 14 18 18 C 1.38015 * 120.85482 * 359.97288 * 17 16 15 19 19 C 1.50705 * 120.33078 * 180.02562 * 18 17 16 20 20 O 1.42899 * 109.46844 * 120.00707 * 19 18 17 21 21 Si 1.86295 * 109.47503 * 0.02562 * 19 18 17 22 22 C 1.38882 * 119.33328 * 0.03167 * 18 17 16 23 23 C 1.38293 * 118.50463 * 359.72042 * 22 18 17 24 24 C 1.52997 * 109.47114 * 59.99880 * 12 11 10 25 25 C 1.52999 * 109.46999 * 269.99757 * 8 7 6 26 26 C 1.35450 * 106.44399 * 0.23598 * 5 4 3 27 27 H 1.09008 * 109.47163 * 90.02075 * 1 2 3 28 28 H 1.08991 * 109.47313 * 210.02006 * 1 2 3 29 29 H 1.09002 * 109.47318 * 330.02782 * 1 2 3 30 30 H 1.08992 * 109.47537 * 150.01515 * 6 5 4 31 31 H 1.09007 * 109.46697 * 30.01774 * 6 5 4 32 32 H 1.09004 * 109.46812 * 60.00079 * 10 8 7 33 33 H 1.08997 * 109.47293 * 299.99975 * 10 8 7 34 34 H 1.08997 * 109.46962 * 180.02562 * 11 10 8 35 35 H 1.08995 * 109.46928 * 60.00077 * 11 10 8 36 36 H 0.97001 * 120.00384 * 335.00737 * 14 12 11 37 37 H 1.08000 * 119.56658 * 180.02562 * 17 16 15 38 38 H 1.09006 * 109.47112 * 240.00237 * 19 18 17 39 39 H 0.96704 * 113.99795 * 179.97438 * 20 19 18 40 40 H 1.48504 * 109.99786 * 59.99799 * 21 19 18 41 41 H 1.48492 * 110.00230 * 181.31790 * 21 19 18 42 42 H 1.08007 * 120.74804 * 180.02562 * 22 18 17 43 43 H 1.08000 * 120.45294 * 180.29196 * 23 22 18 44 44 H 1.09009 * 109.47238 * 59.99946 * 24 12 11 45 45 H 1.08997 * 109.47293 * 179.97438 * 24 12 11 46 46 H 1.08995 * 109.47266 * 299.99934 * 25 8 7 47 47 H 1.09000 * 109.47204 * 59.99992 * 25 8 7 48 48 H 1.08005 * 128.00628 * 179.74353 * 26 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2868 1.0423 0.0000 4 8 3.4537 0.7253 0.0005 5 6 3.6025 -0.6068 0.0004 6 6 4.9021 -1.3696 0.0003 7 8 5.3132 -1.6101 -1.3470 8 6 6.5421 -2.3306 -1.4599 9 1 6.6551 -2.9929 -0.6016 10 6 6.5310 -3.1597 -2.7457 11 6 7.8470 -3.9306 -2.8669 12 6 9.0148 -2.9430 -2.9070 13 1 8.9013 -2.2807 -3.7653 14 7 10.2749 -3.6812 -3.0224 15 6 11.3880 -3.0716 -3.5895 16 7 12.5224 -3.7461 -3.6959 17 6 13.6022 -3.2045 -4.2274 18 6 13.5859 -1.9060 -4.6949 19 6 14.8256 -1.2994 -5.3002 20 8 14.5574 -0.9150 -6.6501 21 14 16.2057 -2.5505 -5.2738 22 6 12.4156 -1.1640 -4.6018 23 6 11.2988 -1.7600 -4.0449 24 6 9.0260 -2.1139 -1.6211 25 6 7.7103 -1.3434 -1.4997 26 6 2.3539 -1.1320 -0.0057 27 1 -0.3634 -0.0004 -1.0277 28 1 -0.3633 -0.8897 0.5141 29 1 -0.3634 0.8902 0.5134 30 1 4.7650 -2.3212 0.5137 31 1 5.6659 -0.7861 0.5146 32 1 6.4179 -2.4974 -3.6040 33 1 5.6988 -3.8630 -2.7174 34 1 7.8392 -4.5209 -3.7832 35 1 7.9605 -4.5928 -2.0086 36 1 10.3314 -4.5968 -2.7068 37 1 14.5100 -3.7852 -4.2982 38 1 15.1193 -0.4219 -4.7240 39 1 15.3129 -0.5157 -7.1028 40 1 15.8174 -3.7515 -6.0563 41 1 17.4427 -1.9543 -5.8389 42 1 12.3771 -0.1460 -4.9607 43 1 10.3710 -1.2135 -3.9613 44 1 9.1395 -2.7762 -0.7627 45 1 9.8582 -1.4106 -1.6495 46 1 7.5973 -0.6812 -2.3580 47 1 7.7182 -0.7527 -0.5836 48 1 2.0709 -2.1743 -0.0114 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_17322388_13915762.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:26:46 Heat of formation + Delta-G solvation = 27.352703 kcal Electronic energy + Delta-G solvation = -29295.413013 eV Core-core repulsion = 25127.345152 eV Total energy + Delta-G solvation = -4168.067861 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.173 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -45.87742 -41.47547 -40.48583 -38.62044 -37.77453 -35.77403 -35.56878 -33.63477 -33.27694 -32.10378 -31.65394 -29.63320 -29.49383 -27.58877 -26.08188 -24.87308 -24.05702 -23.83522 -23.31271 -22.10152 -21.40416 -21.02022 -18.76315 -18.71950 -18.48728 -18.33093 -18.05083 -17.75916 -16.95551 -16.56013 -16.40198 -16.19199 -15.76583 -15.56086 -15.36374 -15.08358 -14.83741 -14.64504 -14.36642 -14.29283 -14.08197 -14.06889 -13.91619 -13.86753 -13.82457 -13.54756 -13.37920 -13.22808 -12.77340 -12.42586 -12.32686 -12.26512 -12.13102 -11.90574 -11.75872 -11.67068 -11.12556 -10.95969 -10.68134 -10.63407 -10.53258 -10.49252 -10.25823 -8.65947 -4.95488 0.30917 0.34942 0.49435 1.23365 1.30925 1.60451 1.91359 1.97788 2.05810 2.69163 2.86163 3.23367 3.36674 3.40317 3.43028 3.53298 3.65849 3.82587 3.85009 3.87182 3.91158 3.97227 4.02110 4.04037 4.07659 4.12382 4.15605 4.21489 4.27768 4.33340 4.37204 4.45629 4.50427 4.53904 4.55736 4.58614 4.73568 4.78209 4.80497 4.80600 4.88226 4.95292 4.96685 5.04737 5.10525 5.14413 5.16923 5.36636 5.56994 5.95863 6.03733 6.45896 6.56841 7.21437 7.30764 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 C 0.013 3.987 3 N -0.358 5.358 4 O 0.109 5.891 5 C -0.034 4.034 6 C 0.144 3.856 7 O -0.374 6.374 8 C 0.090 3.910 9 H 0.067 0.933 10 C -0.112 4.112 11 C -0.123 4.123 12 C 0.152 3.848 13 H 0.085 0.915 14 N -0.719 5.719 15 C 0.409 3.591 16 N -0.539 5.539 17 C 0.159 3.841 18 C -0.189 4.189 19 C -0.060 4.060 20 O -0.538 6.538 21 Si 0.675 3.325 22 C -0.004 4.004 23 C -0.239 4.239 24 C -0.133 4.133 25 C -0.141 4.141 26 C -0.206 4.206 27 H 0.082 0.918 28 H 0.083 0.917 29 H 0.078 0.922 30 H 0.087 0.913 31 H 0.076 0.924 32 H 0.077 0.923 33 H 0.078 0.922 34 H 0.079 0.921 35 H 0.073 0.927 36 H 0.405 0.595 37 H 0.155 0.845 38 H 0.074 0.926 39 H 0.379 0.621 40 H -0.253 1.253 41 H -0.260 1.260 42 H 0.134 0.866 43 H 0.134 0.866 44 H 0.070 0.930 45 H 0.073 0.927 46 H 0.076 0.924 47 H 0.071 0.929 48 H 0.174 0.826 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.237 -2.302 3.352 4.073 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.135 4.135 2 C -0.145 4.145 3 N -0.062 5.062 4 O 0.040 5.960 5 C -0.098 4.098 6 C 0.067 3.933 7 O -0.293 6.293 8 C 0.033 3.967 9 H 0.085 0.915 10 C -0.150 4.150 11 C -0.161 4.161 12 C 0.047 3.953 13 H 0.103 0.897 14 N -0.351 5.351 15 C 0.173 3.827 16 N -0.256 5.256 17 C 0.001 3.999 18 C -0.194 4.194 19 C -0.171 4.171 20 O -0.345 6.345 21 Si 0.576 3.424 22 C -0.030 4.030 23 C -0.264 4.264 24 C -0.172 4.172 25 C -0.179 4.179 26 C -0.228 4.228 27 H 0.101 0.899 28 H 0.102 0.898 29 H 0.097 0.903 30 H 0.105 0.895 31 H 0.094 0.906 32 H 0.095 0.905 33 H 0.097 0.903 34 H 0.098 0.902 35 H 0.092 0.908 36 H 0.241 0.759 37 H 0.172 0.828 38 H 0.092 0.908 39 H 0.227 0.773 40 H -0.178 1.178 41 H -0.185 1.185 42 H 0.152 0.848 43 H 0.152 0.848 44 H 0.089 0.911 45 H 0.092 0.908 46 H 0.095 0.905 47 H 0.090 0.910 48 H 0.191 0.809 Dipole moment (debyes) X Y Z Total from point charges -0.261 -2.370 3.175 3.971 hybrid contribution 0.090 0.434 -0.958 1.056 sum -0.171 -1.936 2.216 2.948 Atomic orbital electron populations 1.20204 0.85601 1.04036 1.03674 1.23681 0.99313 0.88644 1.02881 1.73896 0.89244 1.24114 1.18940 1.84844 1.21667 1.22501 1.66995 1.23984 0.97395 0.84015 1.04397 1.20646 0.89639 0.97467 0.85553 1.88007 1.40158 1.76678 1.24484 1.22217 0.83205 0.92538 0.98768 0.91457 1.21516 0.97285 0.98835 0.97383 1.21750 0.92931 0.97832 1.03584 1.21074 0.82290 0.93663 0.98321 0.89672 1.44551 1.07874 1.16697 1.65994 1.18378 0.86705 0.88665 0.88957 1.67171 0.98926 1.37772 1.21691 1.22131 0.95027 0.91126 0.91599 1.19913 0.96331 0.96200 1.06947 1.24523 1.02604 1.05535 0.84389 1.86592 1.40535 1.82414 1.24994 0.95253 0.76173 0.79251 0.91727 1.21167 0.90808 0.99523 0.91527 1.21474 1.00728 0.95642 1.08565 1.22001 0.97565 0.99412 0.98188 1.22022 0.93699 0.98611 1.03618 1.22503 0.91035 1.01367 1.07875 0.89942 0.89811 0.90341 0.89518 0.90579 0.90453 0.90330 0.90208 0.90820 0.75872 0.82814 0.90768 0.77338 1.17784 1.18481 0.84801 0.84822 0.91129 0.90824 0.90530 0.91022 0.80857 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 0.05 10.47 36.01 0.38 0.43 16 2 C 0.01 0.03 7.33 -82.10 -0.60 -0.57 16 3 N -0.36 -1.66 12.07 33.42 0.40 -1.26 16 4 O 0.11 0.40 11.20 17.17 0.19 0.59 16 5 C -0.03 -0.04 7.12 -35.30 -0.25 -0.29 16 6 C 0.14 -0.24 6.31 36.00 0.23 -0.02 16 7 O -0.37 0.09 9.97 -35.23 -0.35 -0.26 16 8 C 0.09 -0.22 2.61 -26.73 -0.07 -0.29 16 9 H 0.07 -0.25 7.79 -51.93 -0.40 -0.65 16 10 C -0.11 0.30 5.57 -26.73 -0.15 0.15 16 11 C -0.12 0.40 5.39 -26.73 -0.14 0.26 16 12 C 0.15 -0.35 2.14 -67.93 -0.15 -0.49 16 13 H 0.09 -0.16 6.43 -51.93 -0.33 -0.49 16 14 N -0.72 0.40 5.24 -53.93 -0.28 0.12 16 15 C 0.41 0.77 7.63 -155.02 -1.18 -0.42 16 16 N -0.54 -1.72 10.39 -12.44 -0.13 -1.85 16 17 C 0.16 0.34 9.84 -17.57 -0.17 0.16 16 18 C -0.19 -0.33 5.43 -104.46 -0.57 -0.90 16 19 C -0.06 -0.01 2.83 36.01 0.10 0.09 16 20 O -0.54 -0.72 12.75 -35.23 -0.45 -1.17 16 21 Si 0.67 -0.46 29.82 -169.99 -5.07 -5.53 16 22 C 0.00 -0.01 9.77 -39.32 -0.38 -0.39 16 23 C -0.24 -0.27 8.86 -39.23 -0.35 -0.62 16 24 C -0.13 0.34 5.43 -26.76 -0.15 0.20 16 25 C -0.14 0.36 5.53 -26.76 -0.15 0.21 16 26 C -0.21 -0.14 11.06 -39.38 -0.44 -0.57 16 27 H 0.08 -0.11 8.14 -51.92 -0.42 -0.53 16 28 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 29 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 30 H 0.09 -0.34 8.08 -51.93 -0.42 -0.76 16 31 H 0.08 -0.22 7.87 -51.92 -0.41 -0.63 16 32 H 0.08 -0.14 8.14 -51.93 -0.42 -0.57 16 33 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 34 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 35 H 0.07 -0.29 8.14 -51.93 -0.42 -0.71 16 36 H 0.41 -0.45 8.73 -40.82 -0.36 -0.80 16 37 H 0.16 0.01 4.88 -52.49 -0.26 -0.24 16 38 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 39 H 0.38 -1.00 8.74 45.56 0.40 -0.60 16 40 H -0.25 -0.66 7.11 56.52 0.40 -0.25 16 41 H -0.26 -0.31 7.11 56.52 0.40 0.09 16 42 H 0.13 0.03 8.06 -52.48 -0.42 -0.39 16 43 H 0.13 -0.08 6.10 -52.49 -0.32 -0.40 16 44 H 0.07 -0.18 8.14 -51.92 -0.42 -0.61 16 45 H 0.07 -0.12 7.71 -51.93 -0.40 -0.52 16 46 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 47 H 0.07 -0.19 7.87 -51.93 -0.41 -0.60 16 48 H 0.17 -0.36 8.06 -52.48 -0.42 -0.79 16 LS Contribution 390.54 15.07 5.89 5.89 Total: 0.00 -8.45 390.54 -11.01 -19.46 By element: Atomic # 1 Polarization: -5.75 SS G_CDS: -7.17 Total: -12.92 kcal Atomic # 6 Polarization: 0.98 SS G_CDS: -4.04 Total: -3.06 kcal Atomic # 7 Polarization: -2.98 SS G_CDS: -0.01 Total: -2.99 kcal Atomic # 8 Polarization: -0.23 SS G_CDS: -0.61 Total: -0.84 kcal Atomic # 14 Polarization: -0.46 SS G_CDS: -5.07 Total: -5.53 kcal Total LS contribution 5.89 Total: 5.89 kcal Total: -8.45 -11.01 -19.46 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17322388_13915762.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 46.810 kcal (2) G-P(sol) polarization free energy of solvation -8.446 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 38.364 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.011 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.457 kcal (6) G-S(sol) free energy of system = (1) + (5) 27.353 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds