Wall clock time and date at job start Mon Mar 8 2021 10:26:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 N 1.30177 * 126.80010 * 2 1 4 4 O 1.20925 * 111.60152 * 179.68979 * 3 2 1 5 5 C 1.34046 * 111.56475 * 0.45092 * 4 3 2 6 6 C 1.50699 * 126.77058 * 179.82827 * 5 4 3 7 7 O 1.42902 * 109.47251 * 269.68399 * 6 5 4 8 8 C 1.42905 * 114.00182 * 180.02562 * 7 6 5 9 9 H 1.09000 * 109.46838 * 329.99818 * 8 7 6 10 10 C 1.52997 * 109.47266 * 89.99755 * 8 7 6 11 11 C 1.52996 * 109.47165 * 180.02562 * 10 8 7 12 12 C 1.53002 * 109.46972 * 300.00293 * 11 10 8 13 13 H 1.09000 * 109.46986 * 299.99742 * 12 11 10 14 14 N 1.46496 * 109.47428 * 180.02562 * 12 11 10 15 15 C 1.38616 * 120.00186 * 84.99175 * 14 12 11 16 16 N 1.29681 * 124.95126 * 0.03457 * 15 14 12 17 17 C 1.32115 * 116.87001 * 179.97438 * 16 15 14 18 18 C 1.33329 * 114.57810 * 359.97438 * 17 16 15 19 19 C 1.50701 * 125.95009 * 179.97438 * 18 17 16 20 20 O 1.42896 * 109.47135 * 300.00055 * 19 18 17 21 21 Si 1.86299 * 109.46887 * 180.02562 * 19 18 17 22 22 S 1.70966 * 124.94871 * 179.72128 * 15 14 12 23 23 C 1.52997 * 109.47415 * 59.99860 * 12 11 10 24 24 C 1.52999 * 109.46735 * 210.00182 * 8 7 6 25 25 C 1.35442 * 106.44806 * 359.56581 * 5 4 3 26 26 H 1.09001 * 109.47110 * 270.04012 * 1 2 3 27 27 H 1.08992 * 109.47309 * 30.04166 * 1 2 3 28 28 H 1.09002 * 109.46752 * 150.04672 * 1 2 3 29 29 H 1.09009 * 109.47010 * 149.68722 * 6 5 4 30 30 H 1.08997 * 109.47542 * 29.68663 * 6 5 4 31 31 H 1.09000 * 109.47140 * 60.00248 * 10 8 7 32 32 H 1.09001 * 109.47375 * 300.00231 * 10 8 7 33 33 H 1.08992 * 109.47534 * 180.02562 * 11 10 8 34 34 H 1.08996 * 109.47134 * 59.99508 * 11 10 8 35 35 H 0.97005 * 119.99981 * 264.99973 * 14 12 11 36 36 H 1.08003 * 122.71332 * 179.97438 * 17 16 15 37 37 H 1.08994 * 109.46982 * 60.00500 * 19 18 17 38 38 H 0.96700 * 114.00500 * 299.99798 * 20 19 18 39 39 H 1.48499 * 110.00213 * 180.02562 * 21 19 18 40 40 H 1.48501 * 110.00136 * 301.32222 * 21 19 18 41 41 H 1.09001 * 109.46922 * 180.02562 * 23 12 11 42 42 H 1.09000 * 109.47140 * 59.99976 * 23 12 11 43 43 H 1.08993 * 109.47839 * 59.99877 * 24 8 7 44 44 H 1.09000 * 109.47160 * 299.99439 * 24 8 7 45 45 H 1.08006 * 128.00696 * 180.24402 * 25 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2868 1.0424 0.0000 4 8 3.4538 0.7253 0.0061 5 6 3.6024 -0.6068 0.0012 6 6 4.9022 -1.3695 0.0026 7 8 5.3139 -1.6116 -1.3442 8 6 6.5424 -2.3331 -1.4558 9 1 7.1749 -2.1085 -0.5970 10 6 6.2503 -3.8344 -1.4953 11 6 7.5656 -4.6069 -1.6141 12 6 8.2856 -4.1934 -2.8992 13 1 7.6534 -4.4180 -3.7582 14 7 9.5447 -4.9334 -3.0133 15 6 9.5551 -6.2015 -3.5731 16 7 8.5104 -6.8223 -4.0258 17 6 8.7037 -8.0289 -4.5278 18 6 9.9699 -8.4457 -4.4979 19 6 10.4764 -9.7733 -4.9997 20 8 9.8320 -10.8299 -4.2855 21 14 12.3173 -9.8766 -4.7329 22 16 10.9482 -7.1720 -3.7740 23 6 8.5777 -2.6921 -2.8597 24 6 7.2618 -1.9194 -2.7411 25 6 2.3540 -1.1320 0.0008 26 1 -0.3633 0.0007 1.0277 27 1 -0.3633 0.8895 -0.5144 28 1 -0.3633 -0.8904 -0.5131 29 1 4.7648 -2.3207 0.5171 30 1 5.6657 -0.7855 0.5165 31 1 5.6178 -4.0590 -2.3541 32 1 5.7377 -4.1291 -0.5796 33 1 7.3575 -5.6764 -1.6427 34 1 8.1977 -4.3822 -0.7551 35 1 10.3712 -4.5361 -2.6971 36 1 7.9011 -8.6293 -4.9300 37 1 10.2573 -9.8672 -6.0633 38 1 9.9838 -10.8091 -3.3307 39 1 12.8294 -11.1811 -5.2242 40 1 12.9969 -8.7643 -5.4442 41 1 9.0902 -2.3974 -3.7754 42 1 9.2099 -2.4674 -2.0006 43 1 7.4699 -0.8499 -2.7130 44 1 6.6293 -2.1440 -3.5999 45 1 2.0710 -2.1744 0.0011 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_17322388_15704118.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:26:50 Heat of formation + Delta-G solvation = 32.569918 kcal Electronic energy + Delta-G solvation = -27768.015780 eV Core-core repulsion = 23689.326400 eV Total energy + Delta-G solvation = -4078.689380 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.129 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -45.85977 -41.02230 -40.29252 -38.55080 -37.71760 -35.74777 -35.50758 -33.47089 -32.02324 -31.46859 -29.77097 -29.61289 -27.60065 -26.48221 -24.67465 -24.10676 -23.84023 -23.16560 -21.54341 -21.08310 -20.65594 -19.65368 -18.73231 -18.33329 -18.17954 -17.75021 -17.19657 -16.65498 -16.56076 -16.35622 -16.30333 -15.78356 -15.64939 -15.27087 -15.08164 -14.88518 -14.48502 -14.32341 -14.24646 -14.17239 -14.00028 -13.96564 -13.55720 -13.36220 -13.26120 -12.84757 -12.66201 -12.50316 -12.33958 -12.30538 -12.10998 -12.01353 -11.74134 -11.64938 -11.16422 -10.94421 -10.78132 -10.59810 -10.47181 -10.25259 -10.14682 -8.75725 -5.14197 -0.02645 0.02656 0.36841 0.69108 1.25253 1.25771 1.57832 1.90344 1.93435 2.04145 2.08713 2.71822 3.25102 3.39324 3.43121 3.47163 3.56028 3.63653 3.85070 3.92201 3.93041 3.95715 4.02172 4.08153 4.10456 4.15535 4.27056 4.29983 4.35436 4.47721 4.51543 4.53374 4.55332 4.63600 4.74059 4.79989 4.80929 4.82421 4.89358 4.97882 5.02113 5.05915 5.14630 5.16215 5.26050 5.81892 5.98872 6.03300 6.51837 7.00908 7.32303 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 C 0.013 3.987 3 N -0.359 5.359 4 O 0.108 5.892 5 C -0.034 4.034 6 C 0.145 3.855 7 O -0.374 6.374 8 C 0.090 3.910 9 H 0.067 0.933 10 C -0.138 4.138 11 C -0.126 4.126 12 C 0.158 3.842 13 H 0.094 0.906 14 N -0.690 5.690 15 C 0.328 3.672 16 N -0.549 5.549 17 C 0.120 3.880 18 C -0.308 4.308 19 C -0.010 4.010 20 O -0.537 6.537 21 Si 0.655 3.345 22 S 0.085 5.915 23 C -0.125 4.125 24 C -0.112 4.112 25 C -0.206 4.206 26 H 0.082 0.918 27 H 0.078 0.922 28 H 0.083 0.917 29 H 0.086 0.914 30 H 0.076 0.924 31 H 0.077 0.923 32 H 0.068 0.932 33 H 0.075 0.925 34 H 0.065 0.935 35 H 0.413 0.587 36 H 0.176 0.824 37 H 0.121 0.879 38 H 0.380 0.620 39 H -0.236 1.236 40 H -0.241 1.241 41 H 0.078 0.922 42 H 0.072 0.928 43 H 0.079 0.921 44 H 0.077 0.923 45 H 0.174 0.826 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.819 -1.421 3.913 5.028 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.135 4.135 2 C -0.145 4.145 3 N -0.062 5.062 4 O 0.040 5.960 5 C -0.098 4.098 6 C 0.067 3.933 7 O -0.293 6.293 8 C 0.033 3.967 9 H 0.085 0.915 10 C -0.177 4.177 11 C -0.165 4.165 12 C 0.051 3.949 13 H 0.112 0.888 14 N -0.329 5.329 15 C -0.043 4.043 16 N -0.274 5.274 17 C -0.031 4.031 18 C -0.430 4.430 19 C -0.124 4.124 20 O -0.342 6.342 21 Si 0.555 3.445 22 S 0.334 5.666 23 C -0.163 4.163 24 C -0.150 4.150 25 C -0.227 4.227 26 H 0.101 0.899 27 H 0.097 0.903 28 H 0.102 0.898 29 H 0.104 0.896 30 H 0.095 0.905 31 H 0.095 0.905 32 H 0.087 0.913 33 H 0.093 0.907 34 H 0.083 0.917 35 H 0.251 0.749 36 H 0.192 0.808 37 H 0.138 0.862 38 H 0.227 0.773 39 H -0.159 1.159 40 H -0.165 1.165 41 H 0.097 0.903 42 H 0.091 0.909 43 H 0.097 0.903 44 H 0.096 0.904 45 H 0.191 0.809 Dipole moment (debyes) X Y Z Total from point charges 3.479 0.183 3.022 4.612 hybrid contribution -0.867 -1.091 -0.297 1.425 sum 2.612 -0.909 2.726 3.883 Atomic orbital electron populations 1.20203 0.85603 1.04089 1.03613 1.23682 0.99310 0.88644 1.02871 1.73895 0.89245 1.24112 1.18970 1.84842 1.21677 1.22502 1.67029 1.23975 0.97414 0.83996 1.04394 1.20639 0.89747 0.97314 0.85589 1.88010 1.40686 1.76144 1.24465 1.22232 0.84822 0.90930 0.98746 0.91491 1.22002 0.97858 0.94383 1.03439 1.21892 0.95966 1.01103 0.97534 1.21102 0.84520 0.90057 0.99184 0.88842 1.44151 1.11011 1.12288 1.65423 1.23736 0.92739 0.91942 0.95858 1.66486 1.29346 1.10061 1.21544 1.21328 0.95631 0.89990 0.96183 1.25572 0.96569 1.03068 1.17833 1.24107 1.08148 0.82269 0.97909 1.86511 1.75849 1.47845 1.24032 0.94997 0.74902 0.82841 0.91742 1.83991 1.11098 1.10724 1.60790 1.21799 0.97865 0.93289 1.03345 1.21510 0.95286 1.00714 0.97473 1.22503 0.91041 1.01365 1.07835 0.89947 0.90343 0.89812 0.89591 0.90548 0.90454 0.91284 0.90665 0.91663 0.74947 0.80753 0.86170 0.77283 1.15908 1.16540 0.90309 0.90944 0.90274 0.90404 0.80863 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 0.03 10.47 36.01 0.38 0.41 16 2 C 0.01 0.03 7.33 -82.10 -0.60 -0.57 16 3 N -0.36 -1.72 12.07 33.42 0.40 -1.32 16 4 O 0.11 0.42 11.20 17.16 0.19 0.61 16 5 C -0.03 -0.05 7.12 -35.31 -0.25 -0.30 16 6 C 0.14 -0.20 6.31 36.01 0.23 0.03 16 7 O -0.37 -0.08 9.97 -35.23 -0.35 -0.43 16 8 C 0.09 -0.18 2.61 -26.73 -0.07 -0.25 16 9 H 0.07 -0.22 7.79 -51.93 -0.40 -0.63 16 10 C -0.14 0.27 5.54 -26.73 -0.15 0.13 16 11 C -0.13 0.25 5.51 -26.73 -0.15 0.10 16 12 C 0.16 -0.29 2.58 -67.93 -0.18 -0.47 16 13 H 0.09 0.03 7.76 -51.93 -0.40 -0.37 16 14 N -0.69 1.18 5.23 -55.79 -0.29 0.89 16 15 C 0.33 0.19 8.06 -87.68 -0.71 -0.52 16 16 N -0.55 -1.27 9.90 -15.21 -0.15 -1.42 16 17 C 0.12 0.19 11.22 -19.14 -0.21 -0.03 16 18 C -0.31 -0.14 5.74 -36.02 -0.21 -0.35 16 19 C -0.01 0.00 2.99 36.01 0.11 0.11 16 20 O -0.54 -0.02 12.87 -35.23 -0.45 -0.47 16 21 Si 0.65 -0.54 31.05 -169.99 -5.28 -5.81 16 22 S 0.08 -0.04 20.57 -107.50 -2.21 -2.25 16 23 C -0.12 0.41 5.39 -26.70 -0.14 0.27 16 24 C -0.11 0.24 5.58 -26.70 -0.15 0.09 16 25 C -0.21 -0.20 11.06 -39.38 -0.44 -0.64 16 26 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 27 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 28 H 0.08 -0.17 8.14 -51.93 -0.42 -0.60 16 29 H 0.09 -0.30 7.87 -51.92 -0.41 -0.71 16 30 H 0.08 -0.22 8.09 -51.93 -0.42 -0.64 16 31 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 32 H 0.07 -0.17 7.87 -51.93 -0.41 -0.58 16 33 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 34 H 0.06 -0.17 8.14 -51.93 -0.42 -0.60 16 35 H 0.41 -1.59 8.73 -40.82 -0.36 -1.95 16 36 H 0.18 0.11 8.06 -52.48 -0.42 -0.32 16 37 H 0.12 -0.01 7.96 -51.93 -0.41 -0.42 16 38 H 0.38 -1.36 8.70 45.56 0.40 -0.96 16 39 H -0.24 -0.43 7.11 56.52 0.40 -0.03 16 40 H -0.24 -0.34 7.11 56.52 0.40 0.06 16 41 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 42 H 0.07 -0.31 8.14 -51.93 -0.42 -0.74 16 43 H 0.08 -0.16 8.14 -51.93 -0.42 -0.59 16 44 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 45 H 0.17 -0.29 8.06 -52.48 -0.42 -0.71 16 LS Contribution 386.88 15.07 5.83 5.83 Total: 0.00 -7.66 386.88 -11.54 -19.20 By element: Atomic # 1 Polarization: -6.15 SS G_CDS: -6.69 Total: -12.84 kcal Atomic # 6 Polarization: 0.55 SS G_CDS: -2.54 Total: -1.99 kcal Atomic # 7 Polarization: -1.81 SS G_CDS: -0.04 Total: -1.85 kcal Atomic # 8 Polarization: 0.32 SS G_CDS: -0.61 Total: -0.29 kcal Atomic # 14 Polarization: -0.54 SS G_CDS: -5.28 Total: -5.81 kcal Atomic # 16 Polarization: -0.04 SS G_CDS: -2.21 Total: -2.25 kcal Total LS contribution 5.83 Total: 5.83 kcal Total: -7.66 -11.54 -19.20 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17322388_15704118.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 51.766 kcal (2) G-P(sol) polarization free energy of solvation -7.658 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 44.109 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.539 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.196 kcal (6) G-S(sol) free energy of system = (1) + (5) 32.570 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds