Wall clock time and date at job start Mon Mar 8 2021 10:26:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50705 * 1 3 3 N 1.30177 * 126.79988 * 2 1 4 4 O 1.20922 * 111.60178 * 180.02562 * 3 2 1 5 5 C 1.34045 * 111.56832 * 359.97438 * 4 3 2 6 6 C 1.50699 * 126.77616 * 179.97438 * 5 4 3 7 7 O 1.42901 * 109.46633 * 270.02424 * 6 5 4 8 8 C 1.42903 * 113.99808 * 180.02562 * 7 6 5 9 9 H 1.09005 * 109.47056 * 329.99647 * 8 7 6 10 10 C 1.52997 * 109.47236 * 89.99896 * 8 7 6 11 11 C 1.52998 * 109.47213 * 179.97438 * 10 8 7 12 12 C 1.52998 * 109.47290 * 299.99972 * 11 10 8 13 13 H 1.08997 * 109.47693 * 300.00162 * 12 11 10 14 14 N 1.46496 * 109.47491 * 179.97438 * 12 11 10 15 15 C 1.38611 * 119.99896 * 84.99898 * 14 12 11 16 16 N 1.29690 * 124.95554 * 180.02562 * 15 14 12 17 17 C 1.32115 * 116.87311 * 179.97438 * 16 15 14 18 18 C 1.50691 * 122.71429 * 180.02562 * 17 16 15 19 19 O 1.42907 * 109.46699 * 293.54579 * 18 17 16 20 20 Si 1.86297 * 109.47254 * 53.54234 * 18 17 16 21 21 C 1.33332 * 114.57619 * 0.02562 * 17 16 15 22 22 C 1.50699 * 125.95115 * 179.97438 * 21 17 16 23 23 S 1.70971 * 124.94926 * 359.70099 * 15 14 12 24 24 C 1.53007 * 109.46891 * 60.00268 * 12 11 10 25 25 C 1.52997 * 109.47055 * 210.00196 * 8 7 6 26 26 C 1.35447 * 106.44479 * 0.24058 * 5 4 3 27 27 H 1.08999 * 109.46945 * 89.97425 * 1 2 3 28 28 H 1.08994 * 109.46779 * 209.97431 * 1 2 3 29 29 H 1.08998 * 109.46924 * 329.97534 * 1 2 3 30 30 H 1.09000 * 109.47260 * 150.02735 * 6 5 4 31 31 H 1.09000 * 109.47294 * 30.02369 * 6 5 4 32 32 H 1.08999 * 109.47037 * 299.99891 * 10 8 7 33 33 H 1.09000 * 109.46877 * 59.99717 * 10 8 7 34 34 H 1.09004 * 109.47483 * 180.02562 * 11 10 8 35 35 H 1.09000 * 109.47394 * 60.00078 * 11 10 8 36 36 H 0.97002 * 120.00702 * 265.00471 * 14 12 11 37 37 H 1.08995 * 109.47561 * 173.54758 * 18 17 16 38 38 H 0.96700 * 113.99975 * 60.00589 * 19 18 17 39 39 H 1.48503 * 110.00283 * 180.02562 * 20 18 17 40 40 H 1.48500 * 110.00069 * 301.32299 * 20 18 17 41 41 H 1.09005 * 109.46829 * 84.88607 * 22 21 17 42 42 H 1.08999 * 109.47367 * 204.88132 * 22 21 17 43 43 H 1.08996 * 109.47273 * 324.88747 * 22 21 17 44 44 H 1.08999 * 109.46959 * 180.02562 * 24 12 11 45 45 H 1.08993 * 109.47332 * 59.99879 * 24 12 11 46 46 H 1.09002 * 109.47445 * 299.99451 * 25 8 7 47 47 H 1.08999 * 109.47852 * 60.00039 * 25 8 7 48 48 H 1.07998 * 128.00506 * 179.73045 * 26 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 7 2.2868 1.0424 0.0000 4 8 3.4538 0.7254 -0.0005 5 6 3.6025 -0.6068 -0.0004 6 6 4.9022 -1.3695 -0.0014 7 8 5.3120 -1.6104 -1.3490 8 6 6.5402 -2.3319 -1.4629 9 1 7.1740 -2.1080 -0.6048 10 6 6.2480 -3.8331 -1.5034 11 6 7.5630 -4.6055 -1.6260 12 6 8.2802 -4.1907 -2.9122 13 1 7.6462 -4.4144 -3.7702 14 7 9.5396 -4.9299 -3.0293 15 6 9.5497 -6.1975 -3.5900 16 7 10.6057 -6.9352 -3.7400 17 6 10.4315 -8.1215 -4.2950 18 6 11.5661 -9.0846 -4.5311 19 8 12.4569 -8.5410 -5.5074 20 14 12.4875 -9.3620 -2.9358 21 6 9.1706 -8.3976 -4.6292 22 6 8.6848 -9.6695 -5.2751 23 16 8.1705 -7.0195 -4.1775 24 6 8.5725 -2.6894 -2.8717 25 6 7.2580 -1.9171 -2.7488 26 6 2.3540 -1.1320 -0.0051 27 1 -0.3633 0.0005 -1.0277 28 1 -0.3633 -0.8902 0.5134 29 1 -0.3633 0.8898 0.5142 30 1 4.7655 -2.3211 0.5123 31 1 5.6664 -0.7860 0.5120 32 1 5.7367 -4.1286 -0.5873 33 1 5.6142 -4.0568 -2.3616 34 1 7.3548 -5.6751 -1.6553 35 1 8.1971 -4.3819 -0.7681 36 1 10.3665 -4.5323 -2.7145 37 1 11.1683 -10.0336 -4.8906 38 1 12.8495 -7.6945 -5.2535 39 1 13.6095 -10.3097 -3.1554 40 1 13.0077 -8.0708 -2.4187 41 1 8.4979 -10.4191 -4.5060 42 1 7.7622 -9.4707 -5.8204 43 1 9.4428 -10.0388 -5.9658 44 1 9.0830 -2.3938 -3.7882 45 1 9.2066 -2.4657 -2.0138 46 1 6.6243 -2.1409 -3.6071 47 1 7.4663 -0.8475 -2.7201 48 1 2.0710 -2.1743 -0.0105 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_17322388_15704122.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:26:54 Heat of formation + Delta-G solvation = 26.458978 kcal Electronic energy + Delta-G solvation = -29941.175182 eV Core-core repulsion = 25706.683194 eV Total energy + Delta-G solvation = -4234.491989 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.145 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -45.89512 -41.12814 -40.63079 -38.73207 -37.48187 -35.81270 -35.65866 -33.66242 -32.95758 -32.15554 -30.04578 -29.64420 -28.65274 -27.52487 -25.68431 -24.66438 -24.13232 -23.85044 -23.16039 -21.68168 -21.18713 -20.31351 -19.13072 -18.77840 -18.38743 -17.95927 -17.82009 -17.44930 -16.98694 -16.65004 -16.45095 -16.17380 -15.74233 -15.51702 -15.32747 -15.24824 -14.62667 -14.47762 -14.31751 -14.31497 -14.13419 -14.04458 -13.92342 -13.81501 -13.66687 -13.54927 -13.44955 -13.31910 -12.95877 -12.61931 -12.58015 -12.43025 -12.25329 -12.17010 -11.84530 -11.74669 -11.70333 -11.08586 -10.97713 -10.72414 -10.61600 -10.51180 -10.41115 -9.98435 -8.63854 -4.85880 0.02580 0.18658 0.32951 0.79013 1.21735 1.34758 1.80160 1.81854 1.89308 1.92693 2.20271 2.65039 3.21851 3.28281 3.32677 3.39856 3.44629 3.64416 3.72148 3.80816 3.85360 3.89979 3.94262 4.00586 4.05455 4.09475 4.11337 4.18499 4.22011 4.31129 4.39469 4.47364 4.48377 4.48899 4.52821 4.63040 4.65625 4.76655 4.78611 4.79802 4.84783 4.86613 4.90795 4.94539 4.99916 5.06605 5.13089 5.23045 5.57098 5.91531 6.25518 6.46086 6.94869 7.29104 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 C 0.013 3.987 3 N -0.358 5.358 4 O 0.109 5.891 5 C -0.035 4.035 6 C 0.144 3.856 7 O -0.373 6.373 8 C 0.089 3.911 9 H 0.069 0.931 10 C -0.140 4.140 11 C -0.135 4.135 12 C 0.150 3.850 13 H 0.085 0.915 14 N -0.692 5.692 15 C 0.320 3.680 16 N -0.548 5.548 17 C 0.075 3.925 18 C -0.036 4.036 19 O -0.526 6.526 20 Si 0.698 3.302 21 C -0.244 4.244 22 C -0.073 4.073 23 S 0.104 5.896 24 C -0.121 4.121 25 C -0.113 4.113 26 C -0.206 4.206 27 H 0.082 0.918 28 H 0.083 0.917 29 H 0.078 0.922 30 H 0.087 0.913 31 H 0.077 0.923 32 H 0.072 0.928 33 H 0.077 0.923 34 H 0.074 0.926 35 H 0.073 0.927 36 H 0.412 0.588 37 H 0.122 0.878 38 H 0.380 0.620 39 H -0.257 1.257 40 H -0.252 1.252 41 H 0.077 0.923 42 H 0.068 0.932 43 H 0.079 0.921 44 H 0.081 0.919 45 H 0.076 0.924 46 H 0.078 0.922 47 H 0.081 0.919 48 H 0.174 0.826 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.953 -2.602 3.095 5.007 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.135 4.135 2 C -0.145 4.145 3 N -0.062 5.062 4 O 0.040 5.960 5 C -0.099 4.099 6 C 0.067 3.933 7 O -0.292 6.292 8 C 0.032 3.968 9 H 0.087 0.913 10 C -0.178 4.178 11 C -0.174 4.174 12 C 0.045 3.955 13 H 0.103 0.897 14 N -0.332 5.332 15 C -0.051 4.051 16 N -0.274 5.274 17 C -0.056 4.056 18 C -0.149 4.149 19 O -0.332 6.332 20 Si 0.597 3.403 21 C -0.367 4.367 22 C -0.132 4.132 23 S 0.353 5.647 24 C -0.160 4.160 25 C -0.151 4.151 26 C -0.227 4.227 27 H 0.101 0.899 28 H 0.102 0.898 29 H 0.097 0.903 30 H 0.105 0.895 31 H 0.095 0.905 32 H 0.091 0.909 33 H 0.096 0.904 34 H 0.093 0.907 35 H 0.092 0.908 36 H 0.250 0.750 37 H 0.139 0.861 38 H 0.228 0.772 39 H -0.182 1.182 40 H -0.176 1.176 41 H 0.095 0.905 42 H 0.087 0.913 43 H 0.097 0.903 44 H 0.100 0.900 45 H 0.095 0.905 46 H 0.096 0.904 47 H 0.100 0.900 48 H 0.191 0.809 Dipole moment (debyes) X Y Z Total from point charges -3.406 -1.135 3.154 4.778 hybrid contribution 1.375 -0.273 -0.479 1.482 sum -2.031 -1.408 2.675 3.642 Atomic orbital electron populations 1.20206 0.85589 1.04045 1.03682 1.23688 0.99324 0.88638 1.02871 1.73899 0.89237 1.24107 1.18922 1.84844 1.21681 1.22492 1.66999 1.23972 0.97381 0.84022 1.04483 1.20647 0.89815 0.97367 0.85477 1.88010 1.40590 1.76107 1.24533 1.22221 0.84963 0.90781 0.98838 0.91331 1.22020 0.97502 0.94586 1.03696 1.22027 0.96434 1.00969 0.97957 1.21219 0.84078 0.91661 0.98590 0.89743 1.44026 1.10887 1.12212 1.66031 1.23274 0.92852 0.91695 0.97309 1.66047 1.29741 1.06346 1.25313 1.19980 0.94561 0.92215 0.98825 1.24629 0.90641 0.96140 1.03449 1.86568 1.61859 1.41643 1.43154 0.94792 0.83043 0.82852 0.79606 1.25108 0.95194 1.02217 1.14136 1.20201 1.01612 0.91429 0.99933 1.83954 1.10660 1.10126 1.59938 1.21731 0.98038 0.92328 1.03864 1.21513 0.95177 1.00955 0.97460 1.22500 0.91028 1.01364 1.07802 0.89931 0.89803 0.90339 0.89544 0.90499 0.90885 0.90399 0.90727 0.90787 0.75031 0.86053 0.77204 1.18197 1.17572 0.90469 0.91318 0.90256 0.89997 0.90546 0.90357 0.90027 0.80855 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 0.06 10.48 36.01 0.38 0.44 16 2 C 0.01 0.03 7.33 -82.10 -0.60 -0.57 16 3 N -0.36 -1.57 12.07 33.42 0.40 -1.17 16 4 O 0.11 0.37 11.20 17.16 0.19 0.56 16 5 C -0.03 -0.03 7.12 -35.30 -0.25 -0.28 16 6 C 0.14 -0.30 6.31 36.01 0.23 -0.07 16 7 O -0.37 0.25 9.97 -35.23 -0.35 -0.10 16 8 C 0.09 -0.26 2.61 -26.73 -0.07 -0.33 16 9 H 0.07 -0.28 7.79 -51.93 -0.40 -0.68 16 10 C -0.14 0.48 5.54 -26.73 -0.15 0.33 16 11 C -0.13 0.44 5.51 -26.73 -0.15 0.29 16 12 C 0.15 -0.43 2.40 -67.93 -0.16 -0.59 16 13 H 0.08 -0.19 7.26 -51.93 -0.38 -0.57 16 14 N -0.69 0.81 5.23 -55.78 -0.29 0.52 16 15 C 0.32 0.40 8.22 -87.68 -0.72 -0.32 16 16 N -0.55 -1.58 9.77 -11.36 -0.11 -1.69 16 17 C 0.07 0.17 5.19 -84.19 -0.44 -0.27 16 18 C -0.04 -0.05 2.84 36.00 0.10 0.05 16 19 O -0.53 -1.65 12.88 -35.23 -0.45 -2.10 16 20 Si 0.70 0.64 32.62 -169.99 -5.54 -4.90 16 21 C -0.24 -0.29 6.57 -36.02 -0.24 -0.53 16 22 C -0.07 0.08 9.71 36.01 0.35 0.43 16 23 S 0.10 0.03 21.67 -107.50 -2.33 -2.30 16 24 C -0.12 0.46 5.39 -26.75 -0.14 0.32 16 25 C -0.11 0.34 5.57 -26.76 -0.15 0.19 16 26 C -0.21 -0.08 11.06 -39.38 -0.44 -0.51 16 27 H 0.08 -0.12 8.14 -51.93 -0.42 -0.55 16 28 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 29 H 0.08 -0.05 8.14 -51.93 -0.42 -0.48 16 30 H 0.09 -0.37 7.87 -51.93 -0.41 -0.78 16 31 H 0.08 -0.26 8.09 -51.93 -0.42 -0.68 16 32 H 0.07 -0.28 7.87 -51.93 -0.41 -0.69 16 33 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 34 H 0.07 -0.18 8.02 -51.93 -0.42 -0.59 16 35 H 0.07 -0.25 8.14 -51.93 -0.42 -0.68 16 36 H 0.41 -0.72 8.73 -40.82 -0.36 -1.08 16 37 H 0.12 -0.03 6.33 -51.93 -0.33 -0.36 16 38 H 0.38 0.53 8.70 45.56 0.40 0.93 16 39 H -0.26 -0.85 7.11 56.52 0.40 -0.45 16 40 H -0.25 -1.01 7.11 56.52 0.40 -0.61 16 41 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 42 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 43 H 0.08 -0.10 7.17 -51.93 -0.37 -0.47 16 44 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 45 H 0.08 -0.34 8.14 -51.93 -0.42 -0.76 16 46 H 0.08 -0.18 8.14 -51.93 -0.42 -0.61 16 47 H 0.08 -0.22 8.14 -51.93 -0.42 -0.65 16 48 H 0.17 -0.41 8.06 -52.49 -0.42 -0.83 16 LS Contribution 406.88 15.07 6.13 6.13 Total: 0.00 -8.02 406.88 -12.17 -20.19 By element: Atomic # 1 Polarization: -6.36 SS G_CDS: -7.37 Total: -13.72 kcal Atomic # 6 Polarization: 1.02 SS G_CDS: -2.45 Total: -1.42 kcal Atomic # 7 Polarization: -2.34 SS G_CDS: 0.00 Total: -2.34 kcal Atomic # 8 Polarization: -1.02 SS G_CDS: -0.61 Total: -1.64 kcal Atomic # 14 Polarization: 0.64 SS G_CDS: -5.54 Total: -4.90 kcal Atomic # 16 Polarization: 0.03 SS G_CDS: -2.33 Total: -2.30 kcal Total LS contribution 6.13 Total: 6.13 kcal Total: -8.02 -12.17 -20.19 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17322388_15704122.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 46.649 kcal (2) G-P(sol) polarization free energy of solvation -8.021 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 38.628 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.169 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.190 kcal (6) G-S(sol) free energy of system = (1) + (5) 26.459 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds