Wall clock time and date at job start Mon Mar 8 2021 10:26:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50705 * 1 3 3 N 1.30170 * 126.80349 * 2 1 4 4 O 1.20919 * 111.60599 * 179.97438 * 3 2 1 5 5 C 1.34038 * 111.56506 * 359.97438 * 4 3 2 6 6 C 1.50703 * 126.77676 * 179.97438 * 5 4 3 7 7 O 1.42898 * 109.47477 * 270.03162 * 6 5 4 8 8 C 1.42896 * 114.00438 * 179.97438 * 7 6 5 9 9 H 1.09005 * 109.46949 * 29.99327 * 8 7 6 10 10 C 1.52994 * 109.47406 * 149.99708 * 8 7 6 11 11 C 1.53002 * 109.47056 * 179.97438 * 10 8 7 12 12 C 1.53002 * 109.47600 * 300.00097 * 11 10 8 13 13 H 1.09001 * 109.46859 * 300.00372 * 12 11 10 14 14 N 1.46497 * 109.47242 * 179.97438 * 12 11 10 15 15 C 1.39141 * 119.99997 * 155.00232 * 14 12 11 16 16 N 1.32339 * 119.71728 * 0.02562 * 15 14 12 17 17 C 1.32008 * 121.64562 * 180.02562 * 16 15 14 18 18 C 1.37980 * 120.90263 * 0.02562 * 17 16 15 19 19 C 1.50696 * 120.32850 * 179.97438 * 18 17 16 20 20 O 1.42903 * 109.47131 * 119.99523 * 19 18 17 21 21 Si 1.86305 * 109.47185 * 0.02562 * 19 18 17 22 22 C 1.38906 * 119.34588 * 0.22932 * 18 17 16 23 23 C 1.38445 * 118.48332 * 359.50520 * 22 18 17 24 24 F 1.35099 * 120.46908 * 180.22119 * 23 22 18 25 25 C 1.53003 * 109.46614 * 60.00066 * 12 11 10 26 26 C 1.53003 * 109.47067 * 270.00146 * 8 7 6 27 27 C 1.35448 * 106.45106 * 0.24589 * 5 4 3 28 28 H 1.08994 * 109.47270 * 90.02498 * 1 2 3 29 29 H 1.09008 * 109.46717 * 210.02175 * 1 2 3 30 30 H 1.09001 * 109.47105 * 330.01884 * 1 2 3 31 31 H 1.08995 * 109.47284 * 150.02557 * 6 5 4 32 32 H 1.09005 * 109.46542 * 30.02971 * 6 5 4 33 33 H 1.09005 * 109.46657 * 60.00471 * 10 8 7 34 34 H 1.08997 * 109.47290 * 299.99951 * 10 8 7 35 35 H 1.09002 * 109.47018 * 179.97438 * 11 10 8 36 36 H 1.08997 * 109.46925 * 60.00457 * 11 10 8 37 37 H 0.97003 * 119.99781 * 334.99954 * 14 12 11 38 38 H 1.08003 * 119.55082 * 179.97438 * 17 16 15 39 39 H 1.08999 * 109.47358 * 239.99883 * 19 18 17 40 40 H 0.96700 * 114.00311 * 300.00591 * 20 19 18 41 41 H 1.48497 * 110.00233 * 179.97438 * 21 19 18 42 42 H 1.48492 * 109.99800 * 301.31995 * 21 19 18 43 43 H 1.08003 * 120.75952 * 179.72646 * 22 18 17 44 44 H 1.08997 * 109.47234 * 60.00055 * 25 12 11 45 45 H 1.08997 * 109.46910 * 180.02562 * 25 12 11 46 46 H 1.08997 * 109.47116 * 299.99688 * 26 8 7 47 47 H 1.09001 * 109.47186 * 59.99764 * 26 8 7 48 48 H 1.07996 * 128.01335 * 179.74041 * 27 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2869 1.0423 0.0000 4 8 3.4538 0.7253 0.0005 5 6 3.6024 -0.6068 0.0015 6 6 4.9021 -1.3697 0.0018 7 8 5.3131 -1.6112 -1.3454 8 6 6.5419 -2.3317 -1.4579 9 1 6.6552 -2.9933 -0.5990 10 6 6.5306 -3.1617 -2.7431 11 6 7.8467 -3.9327 -2.8639 12 6 9.0146 -2.9452 -2.9048 13 1 8.9009 -2.2836 -3.7636 14 7 10.2746 -3.6835 -3.0199 15 6 11.3904 -3.0719 -3.5828 16 7 11.3073 -1.8228 -4.0121 17 6 12.3416 -1.2059 -4.5527 18 6 13.5558 -1.8466 -4.6911 19 6 14.7279 -1.1302 -5.3106 20 8 15.8011 -1.0697 -4.3690 21 14 14.2197 0.5987 -5.7836 22 6 13.6856 -3.1602 -4.2585 23 6 12.5857 -3.7799 -3.6904 24 9 12.6684 -5.0551 -3.2520 25 6 9.0258 -2.1152 -1.6195 26 6 7.7102 -1.3445 -1.4986 27 6 2.3540 -1.1321 -0.0040 28 1 -0.3633 -0.0004 -1.0276 29 1 -0.3633 -0.8899 0.5142 30 1 -0.3633 0.8902 0.5135 31 1 4.7650 -2.3209 0.5159 32 1 5.6659 -0.7857 0.5155 33 1 6.4175 -2.5000 -3.6019 34 1 5.6985 -3.8651 -2.7141 35 1 7.8384 -4.5244 -3.7793 36 1 7.9602 -4.5943 -2.0051 37 1 10.3311 -4.5987 -2.7035 38 1 12.2358 -0.1861 -4.8920 39 1 15.0546 -1.6693 -6.1998 40 1 15.5811 -0.6029 -3.5512 41 1 15.3671 1.3160 -6.3952 42 1 13.0830 0.5507 -6.7379 43 1 14.6241 -3.6849 -4.3598 44 1 9.1394 -2.7768 -0.7608 45 1 9.8575 -1.4113 -1.6489 46 1 7.5970 -0.6829 -2.3573 47 1 7.7182 -0.7532 -0.5829 48 1 2.0709 -2.1743 -0.0089 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_17322388_17656566.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:26:58 Heat of formation + Delta-G solvation = -19.134817 kcal Electronic energy + Delta-G solvation = -31940.039729 eV Core-core repulsion = 27300.502042 eV Total energy + Delta-G solvation = -4639.537687 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.163 amu Computer time = 1.15 seconds Orbital eigenvalues (eV) -49.87233 -45.86058 -41.50658 -40.48779 -38.64306 -37.76224 -35.77098 -35.60391 -33.55921 -33.18826 -31.98395 -31.74336 -29.61840 -29.47361 -27.57539 -26.38134 -25.00849 -24.03925 -23.90877 -23.17362 -22.55810 -21.39820 -21.03164 -19.32423 -18.72642 -18.53234 -18.35164 -18.27701 -17.74848 -17.57490 -17.01787 -16.83023 -16.40296 -16.16949 -16.11469 -15.97126 -15.50902 -15.37616 -15.04100 -14.94029 -14.47089 -14.38589 -14.32941 -14.29088 -14.05841 -14.00250 -13.86084 -13.59506 -13.45419 -13.28918 -13.17747 -12.75302 -12.59049 -12.41185 -12.26269 -12.11382 -12.07254 -11.74195 -11.62336 -11.24186 -10.94375 -10.72394 -10.65761 -10.56143 -10.47240 -10.46519 -8.77846 -5.09747 -0.07223 0.12036 0.36967 1.21722 1.24979 1.56935 1.88298 1.92533 1.98190 2.55487 2.71608 3.04124 3.24394 3.24883 3.39609 3.40518 3.52445 3.57631 3.59239 3.83056 3.88916 3.91074 3.93828 4.00795 4.05211 4.09232 4.13282 4.15322 4.31227 4.33833 4.35445 4.40183 4.42874 4.52276 4.55149 4.60657 4.66645 4.70923 4.79466 4.81854 4.84408 4.91712 4.97038 5.01442 5.06398 5.13862 5.15814 5.23902 5.41057 5.93425 6.00509 6.15909 6.51050 6.94693 7.32547 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 C 0.013 3.987 3 N -0.358 5.358 4 O 0.109 5.891 5 C -0.034 4.034 6 C 0.144 3.856 7 O -0.374 6.374 8 C 0.090 3.910 9 H 0.066 0.934 10 C -0.111 4.111 11 C -0.126 4.126 12 C 0.155 3.845 13 H 0.095 0.905 14 N -0.714 5.714 15 C 0.392 3.608 16 N -0.510 5.510 17 C 0.147 3.853 18 C -0.210 4.210 19 C -0.055 4.055 20 O -0.541 6.541 21 Si 0.685 3.315 22 C -0.038 4.038 23 C -0.021 4.021 24 F -0.134 7.134 25 C -0.125 4.125 26 C -0.139 4.139 27 C -0.207 4.207 28 H 0.082 0.918 29 H 0.083 0.917 30 H 0.078 0.922 31 H 0.086 0.914 32 H 0.076 0.924 33 H 0.077 0.923 34 H 0.077 0.923 35 H 0.077 0.923 36 H 0.070 0.930 37 H 0.411 0.589 38 H 0.163 0.837 39 H 0.115 0.885 40 H 0.380 0.620 41 H -0.251 1.251 42 H -0.254 1.254 43 H 0.149 0.851 44 H 0.063 0.937 45 H 0.075 0.925 46 H 0.078 0.922 47 H 0.069 0.931 48 H 0.174 0.826 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.835 -2.285 2.601 3.561 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.135 4.135 2 C -0.146 4.146 3 N -0.062 5.062 4 O 0.040 5.960 5 C -0.097 4.097 6 C 0.067 3.933 7 O -0.293 6.293 8 C 0.033 3.967 9 H 0.084 0.916 10 C -0.149 4.149 11 C -0.164 4.164 12 C 0.050 3.950 13 H 0.113 0.887 14 N -0.346 5.346 15 C 0.153 3.847 16 N -0.227 5.227 17 C -0.010 4.010 18 C -0.216 4.216 19 C -0.166 4.166 20 O -0.346 6.346 21 Si 0.587 3.413 22 C -0.064 4.064 23 C -0.047 4.047 24 F -0.113 7.113 25 C -0.164 4.164 26 C -0.177 4.177 27 C -0.228 4.228 28 H 0.100 0.900 29 H 0.102 0.898 30 H 0.097 0.903 31 H 0.104 0.896 32 H 0.094 0.906 33 H 0.096 0.904 34 H 0.095 0.905 35 H 0.096 0.904 36 H 0.089 0.911 37 H 0.248 0.752 38 H 0.179 0.821 39 H 0.133 0.867 40 H 0.227 0.773 41 H -0.176 1.176 42 H -0.179 1.179 43 H 0.167 0.833 44 H 0.082 0.918 45 H 0.094 0.906 46 H 0.096 0.904 47 H 0.088 0.912 48 H 0.191 0.809 Dipole moment (debyes) X Y Z Total from point charges -1.931 -0.164 1.423 2.405 hybrid contribution 0.954 -2.635 0.192 2.809 sum -0.978 -2.799 1.615 3.376 Atomic orbital electron populations 1.20202 0.85613 1.04018 1.03660 1.23682 0.99308 0.88657 1.02919 1.73892 0.89248 1.24110 1.18932 1.84843 1.21655 1.22500 1.66976 1.23989 0.97397 0.84010 1.04329 1.20643 0.89632 0.97425 0.85608 1.88005 1.40205 1.76688 1.24430 1.22224 0.83263 0.92576 0.98642 0.91614 1.21494 0.97131 0.98781 0.97482 1.21787 0.93399 0.97941 1.03242 1.21031 0.81509 0.93314 0.99144 0.88674 1.44661 1.08366 1.16258 1.65345 1.18423 0.85935 0.89211 0.91102 1.67309 1.31831 1.07345 1.16210 1.22350 0.87139 0.98872 0.92617 1.20930 0.97559 0.95613 1.07461 1.24854 0.87543 1.09461 0.94764 1.86510 1.36520 1.80488 1.31066 0.94826 0.80663 0.78131 0.87686 1.21276 0.97667 0.94116 0.93336 1.18007 0.95305 0.81860 1.09576 1.91490 1.96697 1.35194 1.87910 1.21887 0.97718 0.99275 0.97565 1.21999 0.93599 0.98579 1.03571 1.22497 0.91041 1.01348 1.07936 0.89952 0.89831 0.90349 0.89576 0.90576 0.90399 0.90473 0.90430 0.91109 0.75173 0.82070 0.86727 0.77295 1.17599 1.17853 0.83337 0.91848 0.90638 0.90361 0.91202 0.80883 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 0.04 10.47 36.01 0.38 0.42 16 2 C 0.01 0.03 7.33 -82.10 -0.60 -0.57 16 3 N -0.36 -1.69 12.07 33.42 0.40 -1.29 16 4 O 0.11 0.42 11.20 17.18 0.19 0.61 16 5 C -0.03 -0.04 7.12 -35.30 -0.25 -0.29 16 6 C 0.14 -0.21 6.31 36.01 0.23 0.02 16 7 O -0.37 -0.05 9.97 -35.23 -0.35 -0.40 16 8 C 0.09 -0.18 2.61 -26.73 -0.07 -0.25 16 9 H 0.07 -0.22 7.79 -51.93 -0.40 -0.62 16 10 C -0.11 0.24 5.57 -26.73 -0.15 0.09 16 11 C -0.13 0.36 5.39 -26.73 -0.14 0.22 16 12 C 0.15 -0.24 2.47 -67.93 -0.17 -0.41 16 13 H 0.10 0.00 7.54 -51.93 -0.39 -0.40 16 14 N -0.71 0.56 5.22 -53.85 -0.28 0.28 16 15 C 0.39 0.37 7.47 -154.86 -1.16 -0.78 16 16 N -0.51 -0.53 9.20 -12.37 -0.11 -0.65 16 17 C 0.15 -0.06 9.84 -17.57 -0.17 -0.23 16 18 C -0.21 0.11 5.39 -104.47 -0.56 -0.45 16 19 C -0.05 0.07 2.84 36.00 0.10 0.17 16 20 O -0.54 0.36 12.78 -35.23 -0.45 -0.09 16 21 Si 0.69 -1.38 29.82 -169.99 -5.07 -6.45 16 22 C -0.04 -0.01 9.76 -39.26 -0.38 -0.40 16 23 C -0.02 -0.03 7.35 -39.10 -0.29 -0.31 16 24 F -0.13 -0.24 16.65 2.25 0.04 -0.21 16 25 C -0.13 0.22 5.51 -26.75 -0.15 0.08 16 26 C -0.14 0.25 5.53 -26.75 -0.15 0.10 16 27 C -0.21 -0.16 11.06 -39.38 -0.44 -0.60 16 28 H 0.08 -0.10 8.14 -51.93 -0.42 -0.53 16 29 H 0.08 -0.20 8.14 -51.92 -0.42 -0.63 16 30 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 31 H 0.09 -0.32 8.09 -51.93 -0.42 -0.74 16 32 H 0.08 -0.20 7.87 -51.93 -0.41 -0.61 16 33 H 0.08 -0.09 8.14 -51.93 -0.42 -0.52 16 34 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 35 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 36 H 0.07 -0.26 8.14 -51.93 -0.42 -0.68 16 37 H 0.41 -0.75 8.07 -40.82 -0.33 -1.08 16 38 H 0.16 -0.41 4.88 -52.48 -0.26 -0.66 16 39 H 0.12 -0.10 7.96 -51.93 -0.41 -0.51 16 40 H 0.38 -1.69 8.70 45.56 0.40 -1.29 16 41 H -0.25 -0.34 7.11 56.52 0.40 0.06 16 42 H -0.25 -0.05 7.11 56.52 0.40 0.35 16 43 H 0.15 -0.05 8.06 -52.48 -0.42 -0.47 16 44 H 0.06 -0.13 8.14 -51.93 -0.42 -0.55 16 45 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 46 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 47 H 0.07 -0.14 7.87 -51.93 -0.41 -0.55 16 48 H 0.17 -0.34 8.06 -52.49 -0.42 -0.76 16 LS Contribution 399.44 15.07 6.02 6.02 Total: 0.00 -7.69 399.44 -10.49 -18.18 By element: Atomic # 1 Polarization: -5.90 SS G_CDS: -6.91 Total: -12.81 kcal Atomic # 6 Polarization: 0.77 SS G_CDS: -3.97 Total: -3.20 kcal Atomic # 7 Polarization: -1.66 SS G_CDS: 0.01 Total: -1.66 kcal Atomic # 8 Polarization: 0.73 SS G_CDS: -0.61 Total: 0.12 kcal Atomic # 9 Polarization: -0.24 SS G_CDS: 0.04 Total: -0.21 kcal Atomic # 14 Polarization: -1.38 SS G_CDS: -5.07 Total: -6.45 kcal Total LS contribution 6.02 Total: 6.02 kcal Total: -7.69 -10.49 -18.18 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17322388_17656566.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -0.950 kcal (2) G-P(sol) polarization free energy of solvation -7.694 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -8.644 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.491 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.185 kcal (6) G-S(sol) free energy of system = (1) + (5) -19.135 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.15 seconds