Wall clock time and date at job start Mon Mar 8 2021 06:25:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46894 * 1 3 3 H 1.00904 * 109.47044 * 2 1 4 4 C 1.46906 * 109.47109 * 119.99587 * 2 1 3 5 5 C 1.46901 * 109.47225 * 239.99831 * 2 1 3 6 6 C 1.53002 * 109.46939 * 174.07002 * 5 2 1 7 7 H 1.08997 * 109.47495 * 56.40486 * 6 5 2 8 8 C 1.52997 * 109.46996 * 176.40426 * 6 5 2 9 9 C 1.53000 * 109.47480 * 179.97438 * 8 6 5 10 10 C 1.53004 * 109.46955 * 300.00238 * 9 8 6 11 11 H 1.08997 * 109.47036 * 299.99806 * 10 9 8 12 12 N 1.46495 * 109.47358 * 179.97438 * 10 9 8 13 13 C 1.39006 * 120.00056 * 84.99901 * 12 10 9 14 14 N 1.32393 * 119.70712 * 180.02562 * 13 12 10 15 15 C 1.31974 * 121.62311 * 179.97438 * 14 13 12 16 16 C 1.38025 * 120.85607 * 0.02562 * 15 14 13 17 17 C 1.50698 * 120.33526 * 180.02562 * 16 15 14 18 18 O 1.42906 * 109.47062 * 244.97650 * 17 16 15 19 19 Si 1.86305 * 109.47052 * 4.97199 * 17 16 15 20 20 C 1.38879 * 119.33011 * 359.97438 * 16 15 14 21 21 C 1.38305 * 118.50438 * 0.02562 * 20 16 15 22 22 C 1.53000 * 109.47559 * 59.99482 * 10 9 8 23 23 C 1.53001 * 109.46745 * 296.40194 * 6 5 2 24 24 H 1.09007 * 109.47185 * 179.97438 * 1 2 3 25 25 H 1.09001 * 109.47590 * 300.00091 * 1 2 3 26 26 H 1.08998 * 109.47248 * 60.00381 * 1 2 3 27 27 H 1.09001 * 109.46810 * 66.18656 * 4 2 1 28 28 H 1.08994 * 109.47113 * 186.18300 * 4 2 1 29 29 H 1.09001 * 109.47422 * 306.18746 * 4 2 1 30 30 H 1.08996 * 109.47402 * 54.06552 * 5 2 1 31 31 H 1.09001 * 109.46802 * 294.06636 * 5 2 1 32 32 H 1.08996 * 109.47107 * 299.99598 * 8 6 5 33 33 H 1.09001 * 109.47396 * 59.99920 * 8 6 5 34 34 H 1.08991 * 109.47900 * 179.97438 * 9 8 6 35 35 H 1.09002 * 109.47185 * 59.99100 * 9 8 6 36 36 H 0.96998 * 120.00058 * 264.99943 * 12 10 9 37 37 H 1.08000 * 119.57134 * 179.97438 * 15 14 13 38 38 H 1.09001 * 109.47197 * 124.97505 * 17 16 15 39 39 H 0.96695 * 114.00445 * 59.99507 * 18 17 16 40 40 H 1.48506 * 109.99754 * 180.02562 * 19 17 16 41 41 H 1.48503 * 110.00091 * 301.31928 * 19 17 16 42 42 H 1.07997 * 120.74639 * 180.28018 * 20 16 15 43 43 H 1.08005 * 120.44823 * 179.97438 * 21 20 16 44 44 H 1.09001 * 109.47128 * 59.99913 * 22 10 9 45 45 H 1.08996 * 109.47445 * 180.02562 * 22 10 9 46 46 H 1.08996 * 109.47601 * 60.00308 * 23 6 5 47 47 H 1.09001 * 109.47297 * 299.99865 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4689 0.0000 0.0000 3 1 1.8053 0.9513 0.0000 4 6 1.9586 -0.6924 1.1995 5 6 1.9586 -0.6925 -1.1994 6 6 3.4814 -0.5647 -1.2761 7 1 3.9254 -0.9558 -0.3607 8 6 4.0002 -1.3608 -2.4752 9 6 5.5229 -1.2326 -2.5523 10 6 5.9030 0.2405 -2.7152 11 1 5.4586 0.6314 -3.6305 12 7 7.3609 0.3635 -2.7884 13 6 8.0120 0.1989 -4.0055 14 7 9.3299 0.3108 -4.0650 15 6 9.9865 0.1613 -5.2000 16 6 9.3166 -0.1185 -6.3738 17 6 10.0782 -0.2874 -7.6632 18 8 9.7193 0.7582 -8.5688 19 14 11.9075 -0.2097 -7.3186 20 6 7.9336 -0.2439 -6.3545 21 6 7.2729 -0.0820 -5.1503 22 6 5.3841 1.0367 -1.5161 23 6 3.8619 0.9083 -1.4387 24 1 -0.3634 -1.0277 -0.0005 25 1 -0.3634 0.5138 0.8900 26 1 -0.3633 0.5138 -0.8900 27 1 1.6885 -1.7471 1.1459 28 1 3.0429 -0.5976 1.2566 29 1 1.5077 -0.2465 2.0861 30 1 1.5112 -0.2438 -2.0862 31 1 1.6846 -1.7463 -1.1478 32 1 3.7291 -2.4102 -2.3594 33 1 3.5562 -0.9698 -3.3906 34 1 5.8926 -1.8001 -3.4062 35 1 5.9673 -1.6233 -1.6369 36 1 7.8719 0.5598 -1.9877 37 1 11.0619 0.2601 -5.2105 38 1 9.8326 -1.2523 -8.1065 39 1 9.9101 1.6470 -8.2391 40 1 12.6698 -0.3743 -8.5824 41 1 12.2503 1.0888 -6.6847 42 1 7.3868 -0.4670 -7.2587 43 1 6.1978 -0.1724 -5.0994 44 1 5.8285 0.6459 -0.6007 45 1 5.6545 2.0862 -1.6323 46 1 3.4923 1.4755 -0.5845 47 1 3.4179 1.2994 -2.3541 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_17508096_13915762.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:25:05 Heat of formation + Delta-G solvation = 132.241155 kcal Electronic energy + Delta-G solvation = -24034.292655 eV Core-core repulsion = 20723.622546 eV Total energy + Delta-G solvation = -3310.670110 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 293.197 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -44.59905 -42.36522 -41.12818 -38.77188 -37.37965 -34.48755 -33.90030 -33.47498 -31.96833 -31.93714 -29.65638 -27.91593 -26.78730 -25.91037 -25.14300 -24.36964 -23.16418 -22.61895 -21.76796 -20.06563 -19.75659 -19.58286 -19.35726 -18.68191 -17.82068 -17.33660 -17.28427 -16.97061 -16.93752 -16.70713 -16.41740 -16.34019 -16.14029 -16.01642 -15.88505 -15.69289 -15.42012 -15.25598 -15.01946 -14.96998 -14.84535 -14.74513 -14.07577 -13.95585 -13.78838 -13.64124 -13.23093 -13.08025 -12.93569 -12.52412 -12.06813 -11.53217 -11.18366 -11.13020 -9.61292 -5.52961 -1.50779 -0.55036 -0.35978 0.43081 0.49946 0.65005 0.70298 0.99356 1.02772 1.33235 1.37879 1.43511 1.62495 1.67521 1.76618 1.79783 1.91902 2.04165 2.10704 2.14850 2.22614 2.26899 2.34964 2.37416 2.52798 2.63726 2.69765 2.76620 2.77567 2.85862 2.87774 3.02861 3.09526 3.18330 3.27657 3.32441 3.33127 3.46462 3.50014 3.57892 3.73958 3.84348 3.89987 4.00825 4.21238 4.51568 4.68067 5.10597 5.58294 5.80037 6.34349 Molecular weight = 293.20amu Principal moments of inertia in cm(-1) A = 0.042463 B = 0.002848 C = 0.002778 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 659.232067 B = 9828.127437 C =10078.406601 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.048 4.048 2 N -0.389 5.389 3 H 0.424 0.576 4 C -0.052 4.052 5 C -0.008 4.008 6 C -0.117 4.117 7 H 0.098 0.902 8 C -0.109 4.109 9 C -0.139 4.139 10 C 0.156 3.844 11 H 0.085 0.915 12 N -0.724 5.724 13 C 0.405 3.595 14 N -0.537 5.537 15 C 0.157 3.843 16 C -0.225 4.225 17 C -0.061 4.061 18 O -0.530 6.530 19 Si 0.678 3.322 20 C -0.005 4.005 21 C -0.241 4.241 22 C -0.127 4.127 23 C -0.124 4.124 24 H 0.123 0.877 25 H 0.125 0.875 26 H 0.123 0.877 27 H 0.123 0.877 28 H 0.123 0.877 29 H 0.125 0.875 30 H 0.132 0.868 31 H 0.132 0.868 32 H 0.079 0.921 33 H 0.077 0.923 34 H 0.080 0.920 35 H 0.073 0.927 36 H 0.406 0.594 37 H 0.158 0.842 38 H 0.118 0.882 39 H 0.376 0.624 40 H -0.253 1.253 41 H -0.258 1.258 42 H 0.137 0.863 43 H 0.130 0.870 44 H 0.076 0.924 45 H 0.082 0.918 46 H 0.063 0.937 47 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -25.287 -1.769 18.811 31.566 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.190 4.190 2 N 0.034 4.966 3 H 0.261 0.739 4 C -0.194 4.194 5 C -0.130 4.130 6 C -0.136 4.136 7 H 0.116 0.884 8 C -0.147 4.147 9 C -0.178 4.178 10 C 0.050 3.950 11 H 0.103 0.897 12 N -0.357 5.357 13 C 0.169 3.831 14 N -0.253 5.253 15 C -0.001 4.001 16 C -0.230 4.230 17 C -0.172 4.172 18 O -0.337 6.337 19 Si 0.579 3.421 20 C -0.031 4.031 21 C -0.265 4.265 22 C -0.165 4.165 23 C -0.162 4.162 24 H 0.141 0.859 25 H 0.143 0.857 26 H 0.142 0.858 27 H 0.142 0.858 28 H 0.142 0.858 29 H 0.143 0.857 30 H 0.150 0.850 31 H 0.151 0.849 32 H 0.098 0.902 33 H 0.096 0.904 34 H 0.098 0.902 35 H 0.092 0.908 36 H 0.242 0.758 37 H 0.175 0.825 38 H 0.136 0.864 39 H 0.223 0.777 40 H -0.177 1.177 41 H -0.182 1.182 42 H 0.155 0.845 43 H 0.148 0.852 44 H 0.094 0.906 45 H 0.101 0.899 46 H 0.081 0.919 47 H 0.102 0.898 Dipole moment (debyes) X Y Z Total from point charges -24.556 -1.944 19.036 31.131 hybrid contribution -0.683 1.244 -0.655 1.563 sum -25.239 -0.700 18.380 31.231 Atomic orbital electron populations 1.24153 0.75500 1.09722 1.09615 1.45138 1.16356 1.19133 1.15975 0.73916 1.24189 1.05920 1.02537 0.86780 1.24182 0.99055 1.02474 0.87261 1.21847 0.90323 0.98377 1.03040 0.88431 1.21480 0.96477 1.00359 0.96426 1.22092 0.94415 0.97168 1.04158 1.20937 0.80175 0.94792 0.99125 0.89735 1.44415 1.05489 1.78171 1.07624 1.18341 0.88470 0.90104 0.86139 1.67162 1.07405 1.21185 1.29536 1.22363 0.99467 0.91671 0.86560 1.21011 0.95512 1.09419 0.97030 1.24777 1.09473 0.93982 0.88932 1.86615 1.85202 1.17539 1.44298 0.95150 0.74552 0.87793 0.84569 1.21243 0.93397 0.91100 0.97375 1.21408 1.00608 1.11920 0.92592 1.21731 0.94109 1.01951 0.98740 1.21732 0.97789 0.93882 1.02842 0.85871 0.85683 0.85814 0.85801 0.85838 0.85671 0.84980 0.84949 0.90204 0.90445 0.90155 0.90820 0.75769 0.82494 0.86393 0.77658 1.17749 1.18243 0.84533 0.85186 0.90553 0.89894 0.91862 0.89795 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 1.54 9.17 60.06 0.55 2.09 16 2 N -0.39 12.75 0.66 -251.26 -0.16 12.59 16 3 H 0.42 -14.35 6.52 -39.29 -0.26 -14.61 16 4 C -0.05 1.66 8.86 60.07 0.53 2.19 16 5 C -0.01 0.25 4.14 -3.82 -0.02 0.24 16 6 C -0.12 3.14 2.07 -90.62 -0.19 2.95 16 7 H 0.10 -2.65 6.40 -51.93 -0.33 -2.99 16 8 C -0.11 2.46 5.20 -26.73 -0.14 2.32 16 9 C -0.14 2.57 5.42 -26.73 -0.14 2.43 16 10 C 0.16 -2.72 2.14 -67.93 -0.15 -2.86 16 11 H 0.08 -1.44 6.45 -51.93 -0.33 -1.77 16 12 N -0.72 9.48 5.24 -53.93 -0.28 9.20 16 13 C 0.40 -3.82 7.63 -155.02 -1.18 -5.00 16 14 N -0.54 3.72 10.39 -12.44 -0.13 3.59 16 15 C 0.16 -1.17 9.84 -17.57 -0.17 -1.34 16 16 C -0.22 1.82 5.36 -104.46 -0.56 1.26 16 17 C -0.06 0.48 2.82 36.00 0.10 0.58 16 18 O -0.53 3.27 12.84 -35.23 -0.45 2.81 16 19 Si 0.68 -5.30 29.91 -169.99 -5.08 -10.39 16 20 C -0.01 0.05 9.84 -39.32 -0.39 -0.34 16 21 C -0.24 2.50 8.84 -39.22 -0.35 2.15 16 22 C -0.13 2.59 5.39 -26.75 -0.14 2.45 16 23 C -0.12 3.12 4.93 -26.75 -0.13 2.99 16 24 H 0.12 -3.88 8.14 -51.93 -0.42 -4.30 16 25 H 0.12 -3.98 8.10 -51.93 -0.42 -4.40 16 26 H 0.12 -3.93 8.10 -51.93 -0.42 -4.35 16 27 H 0.12 -3.87 7.99 -51.93 -0.41 -4.29 16 28 H 0.12 -3.84 6.55 -51.93 -0.34 -4.18 16 29 H 0.12 -3.96 8.07 -51.93 -0.42 -4.38 16 30 H 0.13 -4.07 8.07 -51.93 -0.42 -4.49 16 31 H 0.13 -4.07 7.99 -51.93 -0.41 -4.49 16 32 H 0.08 -1.78 8.14 -51.93 -0.42 -2.20 16 33 H 0.08 -1.73 8.14 -51.93 -0.42 -2.15 16 34 H 0.08 -1.26 7.66 -51.93 -0.40 -1.66 16 35 H 0.07 -1.30 8.14 -51.93 -0.42 -1.73 16 36 H 0.41 -5.30 8.73 -40.82 -0.36 -5.66 16 37 H 0.16 -1.36 4.85 -52.49 -0.25 -1.61 16 38 H 0.12 -1.02 7.96 -51.93 -0.41 -1.43 16 39 H 0.38 -3.30 8.70 45.56 0.40 -2.90 16 40 H -0.25 1.00 7.11 56.52 0.40 1.40 16 41 H -0.26 1.52 7.01 56.52 0.40 1.92 16 42 H 0.14 -1.35 8.06 -52.49 -0.42 -1.78 16 43 H 0.13 -1.71 6.08 -52.48 -0.32 -2.03 16 44 H 0.08 -1.55 8.14 -51.93 -0.42 -1.97 16 45 H 0.08 -1.52 8.14 -51.93 -0.42 -1.95 16 46 H 0.06 -1.74 6.57 -51.93 -0.34 -2.08 16 47 H 0.08 -2.06 8.14 -51.93 -0.42 -2.48 16 LS Contribution 354.65 15.07 5.34 5.34 Total: 1.00 -36.13 354.65 -11.19 -47.31 By element: Atomic # 1 Polarization: -74.50 SS G_CDS: -8.04 Total: -82.55 kcal Atomic # 6 Polarization: 14.46 SS G_CDS: -2.37 Total: 12.08 kcal Atomic # 7 Polarization: 25.96 SS G_CDS: -0.58 Total: 25.38 kcal Atomic # 8 Polarization: 3.27 SS G_CDS: -0.45 Total: 2.81 kcal Atomic # 14 Polarization: -5.30 SS G_CDS: -5.08 Total: -10.39 kcal Total LS contribution 5.34 Total: 5.34 kcal Total: -36.13 -11.19 -47.31 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17508096_13915762.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 179.555 kcal (2) G-P(sol) polarization free energy of solvation -36.128 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 143.426 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.185 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -47.313 kcal (6) G-S(sol) free energy of system = (1) + (5) 132.241 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds