Wall clock time and date at job start Mon Mar 8 2021 06:25:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 C 1.33333 * 125.95017 * 2 1 4 4 C 1.50697 * 122.71128 * 359.97438 * 3 2 1 5 5 O 1.42897 * 109.47106 * 114.09970 * 4 3 2 6 6 Si 1.86300 * 109.47366 * 234.10316 * 4 3 2 7 7 N 1.32119 * 114.57865 * 180.02562 * 3 2 1 8 8 C 1.29690 * 116.86739 * 359.97438 * 7 3 2 9 9 N 1.38607 * 124.95305 * 179.97438 * 8 7 3 10 10 C 1.46498 * 120.00229 * 180.02562 * 9 8 7 11 11 H 1.08999 * 109.46894 * 35.00257 * 10 9 8 12 12 C 1.53000 * 109.46976 * 155.00345 * 10 9 8 13 13 C 1.52995 * 109.47080 * 179.97438 * 12 10 9 14 14 C 1.52998 * 109.47443 * 300.00161 * 13 12 10 15 15 H 1.08999 * 109.47067 * 299.99582 * 14 13 12 16 16 C 1.53007 * 109.47257 * 179.97438 * 14 13 12 17 17 N 1.46897 * 109.47217 * 174.52001 * 16 14 13 18 18 H 1.00900 * 109.46847 * 54.15858 * 17 16 14 19 19 C 1.46898 * 109.47312 * 174.15627 * 17 16 14 20 20 C 1.46893 * 109.47084 * 294.16177 * 17 16 14 21 21 C 1.53000 * 109.47114 * 59.99860 * 14 13 12 22 22 C 1.52995 * 109.47080 * 300.00362 * 21 14 13 23 23 S 1.70974 * 110.09835 * 0.25304 * 8 7 3 24 24 H 1.09000 * 109.47003 * 93.21452 * 1 2 3 25 25 H 1.08997 * 109.46682 * 213.21571 * 1 2 3 26 26 H 1.08998 * 109.46937 * 333.21334 * 1 2 3 27 27 H 1.09006 * 109.47024 * 354.10305 * 4 3 2 28 28 H 0.96702 * 114.00669 * 180.02562 * 5 4 3 29 29 H 1.48500 * 109.99816 * 178.68340 * 6 4 3 30 30 H 1.48498 * 109.99771 * 300.00279 * 6 4 3 31 31 H 0.97005 * 119.99525 * 0.02562 * 9 8 7 32 32 H 1.08994 * 109.47197 * 300.00072 * 12 10 9 33 33 H 1.09000 * 109.46911 * 59.99966 * 12 10 9 34 34 H 1.09000 * 109.47081 * 60.00308 * 13 12 10 35 35 H 1.09001 * 109.47420 * 179.97438 * 13 12 10 36 36 H 1.08998 * 109.46731 * 294.52047 * 16 14 13 37 37 H 1.08999 * 109.46961 * 54.51933 * 16 14 13 38 38 H 1.09003 * 109.46725 * 59.99740 * 19 17 16 39 39 H 1.08995 * 109.47195 * 180.02562 * 19 17 16 40 40 H 1.08999 * 109.46973 * 300.00361 * 19 17 16 41 41 H 1.08996 * 109.47713 * 66.69479 * 20 17 16 42 42 H 1.09002 * 109.47099 * 186.69825 * 20 17 16 43 43 H 1.09004 * 109.47003 * 306.69443 * 20 17 16 44 44 H 1.08994 * 109.47197 * 180.02562 * 21 14 13 45 45 H 1.09000 * 109.46911 * 60.00158 * 21 14 13 46 46 H 1.09000 * 109.47081 * 299.99691 * 22 21 14 47 47 H 1.09001 * 109.47420 * 180.02562 * 22 21 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2898 1.0794 0.0000 4 6 1.7415 2.4830 -0.0006 5 8 2.0801 3.1272 1.2292 6 14 2.4752 3.4359 -1.4234 7 7 3.5851 0.8189 -0.0005 8 6 3.9316 -0.4309 -0.0005 9 7 5.2385 -0.8926 -0.0015 10 6 5.5066 -2.3328 -0.0019 11 1 4.7451 -2.8440 -0.5909 12 6 6.8848 -2.5948 -0.6125 13 6 7.1651 -4.0989 -0.6123 14 6 7.1360 -4.6230 0.8248 15 1 7.8974 -4.1115 1.4136 16 6 7.4157 -6.1273 0.8249 17 7 7.5178 -6.6063 2.2098 18 1 6.6887 -6.3403 2.7197 19 6 7.6465 -8.0696 2.2136 20 6 8.6981 -6.0092 2.8486 21 6 5.7578 -4.3610 1.4354 22 6 5.4775 -2.8570 1.4352 23 16 2.5413 -1.4260 -0.0068 24 1 -0.3633 -0.0576 -1.0260 25 1 -0.3632 -0.8598 0.5629 26 1 -0.3633 0.9174 0.4631 27 1 0.6571 2.4494 -0.1065 28 1 1.7581 4.0363 1.2988 29 1 1.9183 4.8122 -1.4539 30 1 3.9533 3.4888 -1.2906 31 1 5.9756 -0.2620 -0.0019 32 1 6.9057 -2.2211 -1.6361 33 1 7.6462 -2.0836 -0.0234 34 1 6.4037 -4.6104 -1.2011 35 1 8.1467 -4.2857 -1.0477 36 1 6.6024 -6.6480 0.3194 37 1 8.3523 -6.3227 0.3028 38 1 8.5421 -8.3570 1.6627 39 1 7.7218 -8.4251 3.2412 40 1 6.7706 -8.5126 1.7396 41 1 8.5501 -4.9345 2.9532 42 1 8.8421 -6.4537 3.8334 43 1 9.5781 -6.1966 2.2333 44 1 5.7372 -4.7340 2.4594 45 1 4.9964 -4.8725 0.8466 46 1 6.2389 -2.3454 2.0240 47 1 4.4958 -2.6702 1.8707 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_17508096_15704122.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:25:11 Heat of formation + Delta-G solvation = 135.827830 kcal Electronic energy + Delta-G solvation = -24623.218252 eV Core-core repulsion = 21246.318300 eV Total energy + Delta-G solvation = -3376.899952 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 313.169 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -44.58132 -41.85435 -41.21986 -38.45257 -37.49219 -34.58222 -33.60663 -33.01135 -31.95024 -30.16987 -29.24710 -27.70886 -26.41064 -25.74143 -24.88206 -24.17398 -22.87001 -21.75413 -21.02594 -20.01007 -19.97429 -19.71120 -19.12047 -18.27030 -18.23623 -17.49432 -17.18952 -16.92710 -16.67068 -16.40576 -16.31016 -16.24109 -16.06825 -15.97129 -15.69729 -15.50048 -15.47773 -15.12634 -14.96813 -14.77700 -14.59777 -14.47925 -14.17988 -13.98130 -13.86012 -13.78144 -13.61913 -13.24000 -12.97639 -12.85681 -12.42777 -11.91648 -11.28168 -11.11421 -10.70166 -9.45739 -5.46209 -1.49657 -0.75890 -0.62047 -0.03339 0.43846 0.51102 0.66252 0.69938 0.91719 1.14573 1.19490 1.33255 1.38796 1.62580 1.63638 1.68022 1.77748 1.81050 1.93142 2.10360 2.12307 2.23443 2.27967 2.33491 2.38208 2.46243 2.59148 2.70099 2.73242 2.77745 2.90780 2.98144 3.11051 3.18230 3.29885 3.35217 3.46139 3.51298 3.53910 3.68285 3.70164 3.78541 3.97432 4.19516 4.23061 4.48437 4.70330 5.38917 5.85895 6.24881 Molecular weight = 313.17amu Principal moments of inertia in cm(-1) A = 0.026715 B = 0.003038 C = 0.002920 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1047.858874 B = 9215.525371 C = 9586.535199 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 C -0.237 4.237 3 C 0.120 3.880 4 C -0.041 4.041 5 O -0.530 6.530 6 Si 0.694 3.306 7 N -0.527 5.527 8 C 0.312 3.688 9 N -0.696 5.696 10 C 0.154 3.846 11 H 0.085 0.915 12 C -0.128 4.128 13 C -0.106 4.106 14 C -0.118 4.118 15 H 0.098 0.902 16 C -0.008 4.008 17 N -0.389 5.389 18 H 0.425 0.575 19 C -0.048 4.048 20 C -0.052 4.052 21 C -0.125 4.125 22 C -0.140 4.140 23 S 0.096 5.904 24 H 0.079 0.921 25 H 0.070 0.930 26 H 0.081 0.919 27 H 0.083 0.917 28 H 0.382 0.618 29 H -0.258 1.258 30 H -0.247 1.247 31 H 0.413 0.587 32 H 0.086 0.914 33 H 0.077 0.923 34 H 0.080 0.920 35 H 0.083 0.917 36 H 0.133 0.867 37 H 0.133 0.867 38 H 0.123 0.877 39 H 0.125 0.875 40 H 0.124 0.876 41 H 0.123 0.877 42 H 0.125 0.875 43 H 0.123 0.877 44 H 0.063 0.937 45 H 0.084 0.916 46 H 0.076 0.924 47 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 13.204 -25.922 5.402 29.589 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.134 4.134 2 C -0.360 4.360 3 C -0.010 4.010 4 C -0.152 4.152 5 O -0.337 6.337 6 Si 0.593 3.407 7 N -0.251 5.251 8 C -0.060 4.060 9 N -0.338 5.338 10 C 0.048 3.952 11 H 0.103 0.897 12 C -0.166 4.166 13 C -0.145 4.145 14 C -0.137 4.137 15 H 0.116 0.884 16 C -0.130 4.130 17 N 0.034 4.966 18 H 0.261 0.739 19 C -0.190 4.190 20 C -0.194 4.194 21 C -0.164 4.164 22 C -0.179 4.179 23 S 0.344 5.656 24 H 0.097 0.903 25 H 0.089 0.911 26 H 0.099 0.901 27 H 0.101 0.899 28 H 0.231 0.769 29 H -0.183 1.183 30 H -0.171 1.171 31 H 0.251 0.749 32 H 0.105 0.895 33 H 0.096 0.904 34 H 0.099 0.901 35 H 0.102 0.898 36 H 0.151 0.849 37 H 0.151 0.849 38 H 0.141 0.859 39 H 0.143 0.857 40 H 0.142 0.858 41 H 0.142 0.858 42 H 0.143 0.857 43 H 0.142 0.858 44 H 0.081 0.919 45 H 0.102 0.898 46 H 0.095 0.905 47 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges 14.464 -26.736 5.123 30.826 hybrid contribution -0.423 1.867 1.297 2.313 sum 14.042 -24.868 6.421 29.272 Atomic orbital electron populations 1.20250 0.86461 1.03542 1.03103 1.25083 1.01230 0.92810 1.16859 1.18839 0.86354 0.94720 1.01084 1.24297 1.01993 0.92649 0.96298 1.86600 1.80941 1.31189 1.34981 0.94793 0.81849 0.80221 0.83853 1.66059 1.17651 1.16367 1.25069 1.23263 0.91607 0.91519 0.99587 1.43849 1.02072 1.06345 1.81487 1.21062 0.98248 0.79963 0.95920 0.89706 1.21774 0.95746 0.95883 1.03168 1.21446 1.03958 0.95844 0.93244 1.21861 0.99813 0.90939 1.01095 0.88412 1.24174 1.09496 0.99336 0.79946 1.45122 1.18395 1.16223 1.16837 0.73882 1.24154 1.09468 0.75675 1.09677 1.24188 0.88082 1.04138 1.03034 1.21765 0.95896 0.98408 1.00291 1.22068 1.04094 0.94050 0.97714 1.83635 0.96761 1.10664 1.74543 0.90283 0.91136 0.90068 0.89920 0.76949 1.18261 1.17097 0.74856 0.89501 0.90400 0.90135 0.89828 0.84908 0.84931 0.85873 0.85694 0.85785 0.85845 0.85672 0.85798 0.91874 0.89758 0.90547 0.90213 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 0.69 9.94 36.01 0.36 1.05 16 2 C -0.24 1.71 6.57 -36.02 -0.24 1.48 16 3 C 0.12 -0.63 5.21 -84.18 -0.44 -1.07 16 4 C -0.04 0.25 2.82 36.00 0.10 0.35 16 5 O -0.53 2.44 12.86 -35.23 -0.45 1.98 16 6 Si 0.69 -4.24 32.63 -169.99 -5.55 -9.79 16 7 N -0.53 2.49 9.79 -11.36 -0.11 2.38 16 8 C 0.31 -2.59 8.22 -87.68 -0.72 -3.31 16 9 N -0.70 8.49 5.23 -55.78 -0.29 8.20 16 10 C 0.15 -2.60 2.41 -67.93 -0.16 -2.76 16 11 H 0.09 -1.40 7.25 -51.93 -0.38 -1.77 16 12 C -0.13 2.43 5.39 -26.73 -0.14 2.29 16 13 C -0.11 2.44 5.20 -26.73 -0.14 2.30 16 14 C -0.12 3.15 2.09 -90.62 -0.19 2.96 16 15 H 0.10 -2.65 6.33 -51.93 -0.33 -2.98 16 16 C -0.01 0.24 4.11 -3.82 -0.02 0.23 16 17 N -0.39 12.68 0.66 -251.27 -0.17 12.51 16 18 H 0.42 -14.25 6.62 -39.29 -0.26 -14.51 16 19 C -0.05 1.53 9.17 60.06 0.55 2.08 16 20 C -0.05 1.65 8.86 60.06 0.53 2.18 16 21 C -0.13 3.06 4.97 -26.73 -0.13 2.92 16 22 C -0.14 2.65 5.51 -26.73 -0.15 2.50 16 23 S 0.10 -0.94 21.70 -107.50 -2.33 -3.27 16 24 H 0.08 -0.82 8.14 -51.93 -0.42 -1.24 16 25 H 0.07 -0.69 8.14 -51.93 -0.42 -1.12 16 26 H 0.08 -0.75 6.75 -51.93 -0.35 -1.10 16 27 H 0.08 -0.70 6.13 -51.93 -0.32 -1.02 16 28 H 0.38 -3.30 8.74 45.56 0.40 -2.90 16 29 H -0.26 1.14 7.11 56.52 0.40 1.54 16 30 H -0.25 0.52 7.11 56.52 0.40 0.92 16 31 H 0.41 -4.97 8.73 -40.82 -0.36 -5.32 16 32 H 0.09 -1.48 8.14 -51.93 -0.42 -1.91 16 33 H 0.08 -1.47 8.14 -51.93 -0.42 -1.90 16 34 H 0.08 -1.81 8.14 -51.93 -0.42 -2.24 16 35 H 0.08 -1.92 8.14 -51.93 -0.42 -2.34 16 36 H 0.13 -4.10 8.07 -51.93 -0.42 -4.52 16 37 H 0.13 -4.09 7.98 -51.93 -0.41 -4.50 16 38 H 0.12 -3.87 8.14 -51.93 -0.42 -4.30 16 39 H 0.12 -3.95 8.10 -51.93 -0.42 -4.37 16 40 H 0.12 -3.93 8.11 -51.93 -0.42 -4.35 16 41 H 0.12 -3.80 6.54 -51.93 -0.34 -4.14 16 42 H 0.12 -3.92 8.06 -51.93 -0.42 -4.34 16 43 H 0.12 -3.86 7.98 -51.93 -0.41 -4.27 16 44 H 0.06 -1.68 6.62 -51.93 -0.34 -2.03 16 45 H 0.08 -2.02 8.14 -51.93 -0.42 -2.44 16 46 H 0.08 -1.40 8.14 -51.93 -0.42 -1.83 16 47 H 0.08 -1.29 8.06 -51.93 -0.42 -1.70 16 LS Contribution 370.89 15.07 5.59 5.59 Total: 1.00 -37.59 370.89 -12.30 -49.89 By element: Atomic # 1 Polarization: -72.49 SS G_CDS: -8.20 Total: -80.69 kcal Atomic # 6 Polarization: 13.97 SS G_CDS: -0.79 Total: 13.19 kcal Atomic # 7 Polarization: 23.67 SS G_CDS: -0.57 Total: 23.10 kcal Atomic # 8 Polarization: 2.44 SS G_CDS: -0.45 Total: 1.98 kcal Atomic # 14 Polarization: -4.24 SS G_CDS: -5.55 Total: -9.79 kcal Atomic # 16 Polarization: -0.94 SS G_CDS: -2.33 Total: -3.27 kcal Total LS contribution 5.59 Total: 5.59 kcal Total: -37.59 -12.30 -49.89 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17508096_15704122.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 185.714 kcal (2) G-P(sol) polarization free energy of solvation -37.586 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 148.128 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.301 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -49.887 kcal (6) G-S(sol) free energy of system = (1) + (5) 135.828 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds