Wall clock time and date at job start Mon Mar 8 2021 06:29:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46897 * 1 3 3 H 1.00894 * 109.47457 * 2 1 4 4 C 1.46901 * 109.47224 * 239.99826 * 2 1 3 5 5 C 1.46898 * 109.47041 * 120.00202 * 2 1 3 6 6 C 1.53001 * 109.47219 * 186.01657 * 5 2 1 7 7 H 1.08994 * 109.47274 * 303.99910 * 6 5 2 8 8 C 1.52998 * 109.47045 * 64.00227 * 6 5 2 9 9 C 1.52997 * 109.47187 * 179.97438 * 8 6 5 10 10 C 1.52992 * 109.47457 * 300.00091 * 9 8 6 11 11 H 1.08998 * 109.47243 * 179.97438 * 10 9 8 12 12 N 1.46501 * 109.46985 * 299.99714 * 10 9 8 13 13 C 1.38408 * 119.99848 * 204.99475 * 12 10 9 14 14 N 1.32492 * 119.21883 * 359.74145 * 13 12 10 15 15 C 1.32280 * 120.74060 * 179.71547 * 14 13 12 16 16 C 1.38608 * 119.19499 * 0.54172 * 15 14 13 17 17 C 1.50702 * 120.72008 * 179.75582 * 16 15 14 18 18 O 1.42896 * 109.46849 * 244.97346 * 17 16 15 19 19 Si 1.86301 * 109.47051 * 4.97292 * 17 16 15 20 20 C 1.38608 * 118.55866 * 359.72883 * 16 15 14 21 21 N 1.32276 * 119.19522 * 359.97438 * 20 16 15 22 22 C 1.52998 * 109.46996 * 59.99792 * 10 9 8 23 23 C 1.52995 * 109.47427 * 299.99739 * 22 10 9 24 24 H 1.08997 * 109.46888 * 300.00481 * 1 2 3 25 25 H 1.09005 * 109.46705 * 59.99868 * 1 2 3 26 26 H 1.08999 * 109.47216 * 180.02562 * 1 2 3 27 27 H 1.09000 * 109.47331 * 293.31961 * 4 2 1 28 28 H 1.08998 * 109.47146 * 53.31865 * 4 2 1 29 29 H 1.08996 * 109.47374 * 173.32028 * 4 2 1 30 30 H 1.08999 * 109.46874 * 306.01837 * 5 2 1 31 31 H 1.09003 * 109.47560 * 66.01591 * 5 2 1 32 32 H 1.08998 * 109.47263 * 299.99802 * 8 6 5 33 33 H 1.09004 * 109.47281 * 59.99708 * 8 6 5 34 34 H 1.09003 * 109.47146 * 60.00377 * 9 8 6 35 35 H 1.09004 * 109.47288 * 179.97438 * 9 8 6 36 36 H 0.96999 * 119.99947 * 25.00560 * 12 10 9 37 37 H 1.07997 * 120.40416 * 180.29019 * 15 14 13 38 38 H 1.08993 * 109.47134 * 124.97467 * 17 16 15 39 39 H 0.96700 * 114.00223 * 59.99747 * 18 17 16 40 40 H 1.48500 * 110.00000 * 180.02562 * 19 17 16 41 41 H 1.48502 * 109.99946 * 301.31963 * 19 17 16 42 42 H 1.07998 * 120.39980 * 180.02562 * 20 16 15 43 43 H 1.08994 * 109.47343 * 60.00319 * 22 10 9 44 44 H 1.09005 * 109.47018 * 179.97438 * 22 10 9 45 45 H 1.08994 * 109.47332 * 300.00586 * 23 22 10 46 46 H 1.08997 * 109.47288 * 179.97438 * 23 22 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8053 0.9512 0.0000 4 6 1.9587 -0.6925 -1.1994 5 6 1.9586 -0.6925 1.1994 6 6 3.4811 -0.5629 1.2773 7 1 3.9259 -0.9465 0.3592 8 6 3.8594 0.9093 1.4511 9 6 5.3819 1.0389 1.5297 10 6 5.9013 0.2347 2.7230 11 1 6.9860 0.3266 2.7787 12 7 5.3031 0.7503 3.9569 13 6 5.9538 0.5776 5.1662 14 7 7.1146 -0.0607 5.1907 15 6 7.7650 -0.2377 6.3288 16 6 7.2126 0.2439 7.5052 17 6 7.9215 0.0566 8.8219 18 8 7.1409 -0.7916 9.6665 19 14 9.5864 -0.7249 8.5250 20 6 5.9943 0.9022 7.4443 21 7 5.3990 1.0507 6.2725 22 6 5.5230 -1.2376 2.5493 23 6 4.0006 -1.3672 2.4708 24 1 -0.3633 0.5139 0.8899 25 1 -0.3633 0.5139 -0.8900 26 1 -0.3633 -1.0276 0.0005 27 1 1.6963 -1.7489 -1.1417 28 1 1.5010 -0.2524 -2.0854 29 1 3.0421 -0.5902 -1.2612 30 1 1.5099 -0.2447 2.0861 31 1 1.6859 -1.7466 1.1472 32 1 3.4891 1.4824 0.6011 33 1 3.4146 1.2929 2.3694 34 1 5.8270 0.6553 0.6116 35 1 5.6514 2.0878 1.6530 36 1 4.4508 1.2125 3.9264 37 1 8.7131 -0.7548 6.3418 38 1 8.0553 1.0251 9.3035 39 1 6.9815 -1.6722 9.3003 40 1 10.2953 -0.9156 9.8159 41 1 9.4192 -2.0318 7.8401 42 1 5.5371 1.2899 8.3427 43 1 5.9681 -1.6212 1.6313 44 1 5.8935 -1.8107 3.3993 45 1 3.5555 -0.9836 3.3888 46 1 3.7311 -2.4160 2.3466 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_17508148_12175864.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:29:46 Heat of formation + Delta-G solvation = 130.408110 kcal Electronic energy + Delta-G solvation = -24566.142412 eV Core-core repulsion = 21189.966905 eV Total energy + Delta-G solvation = -3376.175507 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 294.192 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -42.34607 -42.02476 -39.83948 -38.14605 -35.88222 -34.77249 -33.13427 -31.88315 -31.23663 -29.39427 -27.94422 -26.58758 -25.89705 -25.40972 -23.64901 -23.39053 -22.44564 -20.58829 -19.61120 -19.29198 -18.50324 -18.17836 -17.55643 -17.30660 -16.74067 -16.46083 -16.20643 -16.08715 -15.76271 -15.46827 -15.22836 -14.84263 -14.63405 -14.28208 -14.06680 -13.85520 -13.60132 -13.49435 -13.26880 -13.23657 -13.18522 -13.05867 -12.98859 -12.61537 -12.33144 -12.23357 -11.92988 -11.82230 -11.76468 -11.51349 -11.23950 -11.03122 -10.75265 -10.09397 -9.12784 -4.97158 0.01324 0.08128 1.00929 1.26294 1.52150 1.82309 1.94987 2.75514 2.85724 2.96456 3.12509 3.21534 3.38609 3.49971 3.56560 3.62713 3.67809 3.70937 3.78163 3.92990 4.06223 4.09207 4.17103 4.19197 4.24298 4.33032 4.33906 4.38057 4.45012 4.52136 4.57501 4.59751 4.68694 4.73054 4.76592 4.83718 4.86396 4.88401 4.99511 5.03606 5.13426 5.17793 5.25166 5.31916 5.39475 5.76515 6.04082 6.37833 6.44338 7.25286 Molecular weight = 294.19amu Principal moments of inertia in cm(-1) A = 0.033176 B = 0.003273 C = 0.003184 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 843.786841 B = 8553.707851 C = 8792.666919 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.048 4.048 2 N -0.372 5.372 3 H 0.433 0.567 4 C -0.056 4.056 5 C 0.002 3.998 6 C -0.103 4.103 7 H 0.115 0.885 8 C -0.130 4.130 9 C -0.124 4.124 10 C 0.155 3.845 11 H 0.066 0.934 12 N -0.678 5.678 13 C 0.551 3.449 14 N -0.575 5.575 15 C 0.191 3.809 16 C -0.284 4.284 17 C -0.055 4.055 18 O -0.547 6.547 19 Si 0.753 3.247 20 C 0.214 3.786 21 N -0.587 5.587 22 C -0.129 4.129 23 C -0.108 4.108 24 H 0.123 0.877 25 H 0.128 0.872 26 H 0.119 0.881 27 H 0.120 0.880 28 H 0.128 0.872 29 H 0.125 0.875 30 H 0.136 0.864 31 H 0.138 0.862 32 H 0.104 0.896 33 H 0.072 0.928 34 H 0.098 0.902 35 H 0.066 0.934 36 H 0.417 0.583 37 H 0.180 0.820 38 H 0.129 0.871 39 H 0.385 0.615 40 H -0.307 1.307 41 H -0.277 1.277 42 H 0.179 0.821 43 H 0.085 0.915 44 H 0.036 0.964 45 H 0.057 0.943 46 H 0.073 0.927 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -18.315 0.745 -24.192 30.352 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.189 4.189 2 N 0.051 4.949 3 H 0.271 0.729 4 C -0.198 4.198 5 C -0.120 4.120 6 C -0.122 4.122 7 H 0.133 0.867 8 C -0.168 4.168 9 C -0.162 4.162 10 C 0.050 3.950 11 H 0.084 0.916 12 N -0.317 5.317 13 C 0.194 3.806 14 N -0.298 5.298 15 C 0.024 3.976 16 C -0.292 4.292 17 C -0.166 4.166 18 O -0.355 6.355 19 Si 0.659 3.341 20 C 0.046 3.954 21 N -0.309 5.309 22 C -0.168 4.168 23 C -0.146 4.146 24 H 0.141 0.859 25 H 0.147 0.853 26 H 0.137 0.863 27 H 0.139 0.861 28 H 0.147 0.853 29 H 0.143 0.857 30 H 0.154 0.846 31 H 0.156 0.844 32 H 0.122 0.878 33 H 0.091 0.909 34 H 0.117 0.883 35 H 0.084 0.916 36 H 0.257 0.743 37 H 0.196 0.804 38 H 0.147 0.853 39 H 0.234 0.766 40 H -0.235 1.235 41 H -0.203 1.203 42 H 0.196 0.804 43 H 0.104 0.896 44 H 0.055 0.945 45 H 0.076 0.924 46 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges -18.313 0.398 -24.779 30.814 hybrid contribution -0.095 -0.593 1.765 1.864 sum -18.408 -0.194 -23.014 29.471 Atomic orbital electron populations 1.24146 0.75516 1.09546 1.09741 1.44886 1.16035 1.19296 1.14707 0.72865 1.24232 1.06009 1.02570 0.86978 1.23921 0.96304 1.03346 0.88477 1.21624 0.92930 0.96394 1.01240 0.86719 1.21846 0.95370 0.95530 1.04016 1.21782 0.97208 1.00194 0.97022 1.21052 0.97931 0.93558 0.82424 0.91561 1.44319 1.24245 1.61478 1.01627 1.19779 0.86323 0.87006 0.87531 1.67977 1.09744 1.21680 1.30393 1.23142 0.97483 0.90437 0.86506 1.21622 1.00798 1.08877 0.97887 1.24772 1.02774 1.00061 0.88943 1.86610 1.72935 1.28825 1.47089 0.94358 0.76156 0.82518 0.81030 1.23089 0.89635 0.87856 0.94804 1.68004 1.37298 1.26641 0.98991 1.21879 0.97310 0.95549 1.02108 1.21384 0.94432 1.00739 0.98049 0.85872 0.85346 0.86255 0.86095 0.85309 0.85698 0.84638 0.84388 0.87818 0.90903 0.88347 0.91566 0.74290 0.80357 0.85288 0.76581 1.23538 1.20298 0.80404 0.89606 0.94514 0.92411 0.90805 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 3.01 9.17 127.69 1.17 4.18 16 2 N -0.37 24.28 0.66 -948.85 -0.62 23.66 16 3 H 0.43 -29.56 6.54 -89.70 -0.59 -30.14 16 4 C -0.06 3.53 8.86 127.69 1.13 4.67 16 5 C 0.00 -0.11 4.13 86.30 0.36 0.25 16 6 C -0.10 5.37 2.07 -10.79 -0.02 5.35 16 7 H 0.11 -6.26 6.40 -2.39 -0.02 -6.28 16 8 C -0.13 6.40 4.77 30.59 0.15 6.55 16 9 C -0.12 4.84 5.61 30.59 0.17 5.01 16 10 C 0.16 -4.68 2.77 44.99 0.12 -4.55 16 11 H 0.07 -1.54 7.51 -2.39 -0.02 -1.56 16 12 N -0.68 17.69 4.38 -330.45 -1.45 16.25 16 13 C 0.55 -9.36 8.40 261.49 2.20 -7.17 16 14 N -0.58 8.77 9.21 -197.98 -1.82 6.94 16 15 C 0.19 -3.16 9.92 84.71 0.84 -2.32 16 16 C -0.28 4.72 5.36 -19.69 -0.11 4.61 16 17 C -0.05 0.92 2.83 71.24 0.20 1.12 16 18 O -0.55 7.27 12.85 -148.98 -1.91 5.35 16 19 Si 0.75 -12.52 29.95 68.60 2.05 -10.46 16 20 C 0.21 -3.31 10.99 84.71 0.93 -2.38 16 21 N -0.59 8.68 10.46 -197.98 -2.07 6.61 16 22 C -0.13 4.11 5.61 30.59 0.17 4.28 16 23 C -0.11 4.35 5.05 30.60 0.15 4.50 16 24 H 0.12 -7.69 8.10 -2.39 -0.02 -7.71 16 25 H 0.13 -8.10 8.10 -2.38 -0.02 -8.12 16 26 H 0.12 -7.38 8.14 -2.39 -0.02 -7.39 16 27 H 0.12 -7.50 7.97 -2.39 -0.02 -7.51 16 28 H 0.13 -8.14 8.06 -2.39 -0.02 -8.16 16 29 H 0.12 -7.85 6.57 -2.39 -0.02 -7.86 16 30 H 0.14 -8.10 8.07 -2.39 -0.02 -8.12 16 31 H 0.14 -8.29 7.98 -2.39 -0.02 -8.31 16 32 H 0.10 -5.87 6.58 -2.39 -0.02 -5.89 16 33 H 0.07 -3.44 6.50 -2.38 -0.02 -3.45 16 34 H 0.10 -4.01 8.14 -2.39 -0.02 -4.03 16 35 H 0.07 -2.31 8.14 -2.38 -0.02 -2.33 16 36 H 0.42 -12.60 6.98 -92.71 -0.65 -13.25 16 37 H 0.18 -3.59 5.01 -2.91 -0.01 -3.61 16 38 H 0.13 -2.38 7.96 -2.39 -0.02 -2.39 16 39 H 0.39 -7.17 8.70 -74.06 -0.64 -7.82 16 40 H -0.31 2.14 7.11 99.48 0.71 2.84 16 41 H -0.28 3.78 7.02 99.48 0.70 4.48 16 42 H 0.18 -3.22 8.06 -2.91 -0.02 -3.24 16 43 H 0.09 -2.88 8.14 -2.39 -0.02 -2.90 16 44 H 0.04 -0.83 8.14 -2.38 -0.02 -0.84 16 45 H 0.06 -2.10 7.60 -2.39 -0.02 -2.12 16 46 H 0.07 -2.93 8.14 -2.39 -0.02 -2.95 16 Total: 1.00 -77.02 348.74 0.79 -76.23 By element: Atomic # 1 Polarization: -147.82 SS G_CDS: -0.86 Total: -148.68 kcal Atomic # 6 Polarization: 16.64 SS G_CDS: 7.47 Total: 24.11 kcal Atomic # 7 Polarization: 59.42 SS G_CDS: -5.96 Total: 53.45 kcal Atomic # 8 Polarization: 7.27 SS G_CDS: -1.91 Total: 5.35 kcal Atomic # 14 Polarization: -12.52 SS G_CDS: 2.05 Total: -10.46 kcal Total: -77.02 0.79 -76.23 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17508148_12175864.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 206.637 kcal (2) G-P(sol) polarization free energy of solvation -77.017 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 129.620 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.789 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -76.229 kcal (6) G-S(sol) free energy of system = (1) + (5) 130.408 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds