Wall clock time and date at job start Mon Mar 8 2021 06:29:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46900 * 1 3 3 H 1.00895 * 109.47124 * 2 1 4 4 C 1.46901 * 109.47081 * 119.99856 * 2 1 3 5 5 C 1.46896 * 109.47392 * 239.99850 * 2 1 3 6 6 C 1.53002 * 109.47181 * 64.99821 * 5 2 1 7 7 H 1.09002 * 109.47070 * 305.00230 * 6 5 2 8 8 C 1.52997 * 109.46817 * 65.00049 * 6 5 2 9 9 C 1.52999 * 109.47317 * 179.97438 * 8 6 5 10 10 C 1.53005 * 109.47159 * 300.00546 * 9 8 6 11 11 H 1.09001 * 109.46812 * 179.97438 * 10 9 8 12 12 N 1.46496 * 109.46832 * 299.99302 * 10 9 8 13 13 C 1.39003 * 120.00156 * 275.00158 * 12 10 9 14 14 N 1.32396 * 119.70375 * 180.02562 * 13 12 10 15 15 C 1.31975 * 121.62511 * 179.97438 * 14 13 12 16 16 C 1.38031 * 120.85266 * 0.02562 * 15 14 13 17 17 C 1.50701 * 120.33359 * 179.97438 * 16 15 14 18 18 O 1.42904 * 109.46580 * 119.99937 * 17 16 15 19 19 Si 1.86295 * 109.47289 * 0.02562 * 17 16 15 20 20 C 1.38886 * 119.32822 * 359.97438 * 16 15 14 21 21 C 1.38303 * 118.50671 * 359.72652 * 20 16 15 22 22 C 1.52997 * 109.47452 * 59.99536 * 10 9 8 23 23 C 1.53000 * 109.47233 * 184.99855 * 6 5 2 24 24 H 1.08993 * 109.47107 * 299.99841 * 1 2 3 25 25 H 1.08998 * 109.46822 * 60.00542 * 1 2 3 26 26 H 1.09003 * 109.47193 * 180.02562 * 1 2 3 27 27 H 1.09001 * 109.47431 * 180.02562 * 4 2 1 28 28 H 1.08997 * 109.47097 * 300.00525 * 4 2 1 29 29 H 1.09003 * 109.47178 * 59.99903 * 4 2 1 30 30 H 1.09008 * 109.47165 * 305.00064 * 5 2 1 31 31 H 1.08997 * 109.47437 * 184.99957 * 5 2 1 32 32 H 1.08996 * 109.47853 * 300.00202 * 8 6 5 33 33 H 1.09002 * 109.47153 * 60.00231 * 8 6 5 34 34 H 1.09000 * 109.47486 * 180.02562 * 9 8 6 35 35 H 1.09002 * 109.46716 * 60.00091 * 9 8 6 36 36 H 0.97001 * 119.99753 * 94.99745 * 12 10 9 37 37 H 1.07999 * 119.57825 * 179.97438 * 15 14 13 38 38 H 1.09001 * 109.46954 * 239.99278 * 17 16 15 39 39 H 0.96696 * 114.00128 * 299.99376 * 18 17 16 40 40 H 1.48498 * 110.00230 * 179.97438 * 19 17 16 41 41 H 1.48507 * 109.99972 * 301.31857 * 19 17 16 42 42 H 1.07997 * 120.74376 * 180.02562 * 20 16 15 43 43 H 1.07997 * 120.45394 * 180.28205 * 21 20 16 44 44 H 1.08993 * 109.47194 * 179.97438 * 22 10 9 45 45 H 1.09002 * 109.46695 * 59.99734 * 22 10 9 46 46 H 1.08992 * 109.47399 * 300.00166 * 23 6 5 47 47 H 1.09004 * 109.46724 * 60.00652 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8053 0.9512 0.0000 4 6 1.9587 -0.6925 1.1995 5 6 1.9587 -0.6925 -1.1994 6 6 1.5540 0.0976 -2.4455 7 1 0.4750 0.2523 -2.4430 8 6 2.2635 1.4531 -2.4426 9 6 1.8594 2.2430 -3.6890 10 6 2.2599 1.4602 -4.9411 11 1 1.9715 2.0228 -5.8291 12 7 3.7101 1.2523 -4.9439 13 6 4.5522 2.2351 -5.4510 14 7 5.8618 2.0408 -5.4511 15 6 6.6959 2.9478 -5.9236 16 6 6.2280 4.1402 -6.4378 17 6 7.1911 5.1680 -6.9738 18 8 6.9070 5.4134 -8.3526 19 14 8.9345 4.5341 -6.8028 20 6 4.8607 4.3832 -6.4561 21 6 4.0109 3.4115 -5.9599 22 6 1.5503 0.1047 -4.9440 23 6 1.9542 -0.6849 -3.6979 24 1 -0.3633 0.5138 0.8899 25 1 -0.3633 0.5137 -0.8900 26 1 -0.3634 -1.0277 0.0005 27 1 3.0487 -0.6921 1.1997 28 1 1.5953 -0.1787 2.0894 29 1 1.5953 -1.7201 1.1995 30 1 1.5241 -1.6911 -1.2453 31 1 3.0450 -0.7707 -1.1557 32 1 1.9786 2.0106 -1.5505 33 1 3.3425 1.2984 -2.4451 34 1 2.3652 3.2085 -3.6872 35 1 0.7804 2.3977 -3.6870 36 1 4.0826 0.4288 -4.5917 37 1 7.7584 2.7550 -5.9070 38 1 7.0840 6.0949 -6.4102 39 1 6.9828 4.6306 -8.9152 40 1 9.8939 5.5383 -7.3285 41 1 9.2321 4.2444 -5.3770 42 1 4.4696 5.3081 -6.8535 43 1 2.9420 3.5656 -5.9631 44 1 1.8354 -0.4527 -5.8362 45 1 0.4714 0.2595 -4.9419 46 1 3.0330 -0.8396 -3.7003 47 1 1.4486 -1.6506 -3.6999 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_17508148_13915762.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:29:49 Heat of formation + Delta-G solvation = 113.168264 kcal Electronic energy + Delta-G solvation = -24436.569995 eV Core-core repulsion = 21125.072823 eV Total energy + Delta-G solvation = -3311.497172 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 293.197 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -42.26632 -41.46742 -39.74924 -37.87980 -35.74509 -33.57114 -32.53113 -31.87361 -30.71504 -29.41790 -27.92625 -26.27583 -25.57327 -24.72605 -23.65407 -22.96945 -22.24327 -20.40805 -19.30406 -18.81839 -18.50011 -17.74020 -17.36481 -17.19530 -16.62120 -16.39250 -16.10738 -15.90141 -15.65618 -15.18208 -15.00206 -14.69761 -14.38989 -14.18809 -14.00128 -13.87391 -13.65659 -13.54984 -13.38517 -13.28625 -13.20285 -13.13936 -12.86190 -12.57621 -12.35965 -12.19422 -12.17004 -11.70737 -11.48921 -11.22254 -11.00219 -10.75155 -10.45500 -10.42232 -8.69416 -5.04115 0.18908 0.36617 1.00013 1.29581 1.56564 1.94503 2.11136 2.80960 2.85902 2.96640 3.20196 3.51027 3.51690 3.55442 3.59354 3.71199 3.75243 3.87482 3.97958 4.03968 4.08873 4.13045 4.17030 4.23446 4.28811 4.29829 4.35691 4.35813 4.45761 4.47924 4.54286 4.57718 4.66976 4.69988 4.72635 4.81553 4.84180 4.88648 4.95096 5.04284 5.05896 5.16719 5.20748 5.28196 5.29876 5.38394 5.52172 6.05379 6.54410 6.74254 7.13049 Molecular weight = 293.20amu Principal moments of inertia in cm(-1) A = 0.026388 B = 0.003386 C = 0.003225 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1060.826547 B = 8267.712168 C = 8679.054674 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.056 4.056 2 N -0.374 5.374 3 H 0.431 0.569 4 C -0.047 4.047 5 C 0.000 4.000 6 C -0.104 4.104 7 H 0.115 0.885 8 C -0.125 4.125 9 C -0.136 4.136 10 C 0.146 3.854 11 H 0.070 0.930 12 N -0.707 5.707 13 C 0.400 3.600 14 N -0.561 5.561 15 C 0.146 3.854 16 C -0.237 4.237 17 C -0.054 4.054 18 O -0.559 6.559 19 Si 0.761 3.239 20 C -0.017 4.017 21 C -0.240 4.240 22 C -0.126 4.126 23 C -0.113 4.113 24 H 0.126 0.874 25 H 0.123 0.877 26 H 0.124 0.876 27 H 0.121 0.879 28 H 0.126 0.874 29 H 0.123 0.877 30 H 0.144 0.856 31 H 0.133 0.867 32 H 0.088 0.912 33 H 0.064 0.936 34 H 0.050 0.950 35 H 0.091 0.909 36 H 0.406 0.594 37 H 0.164 0.836 38 H 0.105 0.895 39 H 0.394 0.606 40 H -0.305 1.305 41 H -0.280 1.280 42 H 0.137 0.863 43 H 0.148 0.852 44 H 0.058 0.942 45 H 0.095 0.905 46 H 0.064 0.936 47 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -16.362 -13.729 20.914 29.894 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.198 4.198 2 N 0.049 4.951 3 H 0.268 0.732 4 C -0.189 4.189 5 C -0.122 4.122 6 C -0.123 4.123 7 H 0.133 0.867 8 C -0.162 4.162 9 C -0.175 4.175 10 C 0.041 3.959 11 H 0.088 0.912 12 N -0.340 5.340 13 C 0.163 3.837 14 N -0.279 5.279 15 C -0.010 4.010 16 C -0.242 4.242 17 C -0.166 4.166 18 O -0.366 6.366 19 Si 0.669 3.331 20 C -0.043 4.043 21 C -0.264 4.264 22 C -0.164 4.164 23 C -0.152 4.152 24 H 0.145 0.855 25 H 0.142 0.858 26 H 0.143 0.857 27 H 0.139 0.861 28 H 0.144 0.856 29 H 0.141 0.859 30 H 0.162 0.838 31 H 0.151 0.849 32 H 0.106 0.894 33 H 0.083 0.917 34 H 0.069 0.931 35 H 0.110 0.890 36 H 0.244 0.756 37 H 0.180 0.820 38 H 0.123 0.877 39 H 0.244 0.756 40 H -0.234 1.234 41 H -0.207 1.207 42 H 0.155 0.845 43 H 0.166 0.834 44 H 0.077 0.923 45 H 0.113 0.887 46 H 0.083 0.917 47 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges -15.664 -14.023 21.831 30.308 hybrid contribution -0.086 1.531 -0.505 1.614 sum -15.750 -12.492 21.326 29.307 Atomic orbital electron populations 1.24235 0.76023 1.09898 1.09629 1.44899 1.16153 1.19306 1.14729 0.73172 1.24137 1.05588 1.02562 0.86624 1.23951 1.05653 0.99870 0.82691 1.21654 1.03171 0.94241 0.93216 0.86697 1.21727 1.01153 0.95216 0.98141 1.21972 1.02507 0.98428 0.94564 1.21162 0.77987 0.97899 0.98826 0.91240 1.44671 1.04637 1.18407 1.66322 1.18614 0.87624 0.88311 0.89161 1.67171 1.03024 1.33896 1.23775 1.22394 0.98990 0.88133 0.91529 1.20982 0.96116 0.98467 1.08647 1.24808 1.07283 0.99938 0.84556 1.86469 1.93168 1.39932 1.17079 0.93911 0.72885 0.85427 0.80916 1.21376 0.92296 0.98540 0.92108 1.21631 1.01663 0.95035 1.08075 1.21771 1.01459 0.93964 0.99173 1.21465 1.01984 0.99120 0.92583 0.85519 0.85822 0.85705 0.86051 0.85583 0.85889 0.83818 0.84872 0.89387 0.91692 0.93101 0.89021 0.75585 0.81977 0.87748 0.75645 1.23382 1.20688 0.84543 0.83445 0.92330 0.88657 0.91700 0.89435 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 3.53 8.93 127.69 1.14 4.67 16 2 N -0.37 24.19 0.66 -948.85 -0.62 23.56 16 3 H 0.43 -28.65 6.62 -89.70 -0.59 -29.24 16 4 C -0.05 2.96 9.19 127.69 1.17 4.14 16 5 C 0.00 -0.03 4.12 86.30 0.36 0.33 16 6 C -0.10 5.51 2.07 -10.79 -0.02 5.49 16 7 H 0.12 -6.40 6.18 -2.39 -0.01 -6.42 16 8 C -0.12 5.88 4.80 30.59 0.15 6.03 16 9 C -0.14 5.20 5.54 30.60 0.17 5.37 16 10 C 0.15 -4.89 2.47 44.99 0.11 -4.78 16 11 H 0.07 -2.04 6.44 -2.39 -0.02 -2.06 16 12 N -0.71 19.92 4.40 -324.54 -1.43 18.49 16 13 C 0.40 -7.89 7.63 133.06 1.02 -6.87 16 14 N -0.56 8.63 10.39 -193.26 -2.01 6.62 16 15 C 0.15 -2.25 9.84 84.62 0.83 -1.42 16 16 C -0.24 3.62 5.40 -19.76 -0.11 3.52 16 17 C -0.05 0.78 2.84 71.24 0.20 0.99 16 18 O -0.56 7.13 12.78 -148.98 -1.90 5.22 16 19 Si 0.76 -11.33 29.82 68.60 2.05 -9.28 16 20 C -0.02 0.28 9.77 22.44 0.22 0.50 16 21 C -0.24 4.67 8.85 22.50 0.20 4.86 16 22 C -0.13 4.70 5.61 30.58 0.17 4.87 16 23 C -0.11 5.05 5.03 30.58 0.15 5.20 16 24 H 0.13 -7.95 8.14 -2.39 -0.02 -7.96 16 25 H 0.12 -7.72 6.19 -2.39 -0.01 -7.74 16 26 H 0.12 -7.81 8.11 -2.39 -0.02 -7.83 16 27 H 0.12 -7.48 8.11 -2.39 -0.02 -7.50 16 28 H 0.13 -7.85 8.14 -2.39 -0.02 -7.87 16 29 H 0.12 -7.63 8.14 -2.39 -0.02 -7.65 16 30 H 0.14 -8.85 8.09 -2.38 -0.02 -8.87 16 31 H 0.13 -7.95 8.09 -2.39 -0.02 -7.97 16 32 H 0.09 -4.66 6.63 -2.39 -0.02 -4.67 16 33 H 0.06 -2.76 7.60 -2.39 -0.02 -2.78 16 34 H 0.05 -1.62 7.69 -2.39 -0.02 -1.64 16 35 H 0.09 -3.72 8.14 -2.39 -0.02 -3.74 16 36 H 0.41 -12.15 6.99 -92.71 -0.65 -12.80 16 37 H 0.16 -2.97 4.88 -2.91 -0.01 -2.99 16 38 H 0.11 -1.39 7.96 -2.39 -0.02 -1.41 16 39 H 0.39 -7.98 8.70 -74.06 -0.64 -8.62 16 40 H -0.31 1.76 7.11 99.48 0.71 2.47 16 41 H -0.28 3.14 7.11 99.48 0.71 3.85 16 42 H 0.14 -2.31 8.06 -2.91 -0.02 -2.33 16 43 H 0.15 -3.48 6.10 -2.91 -0.02 -3.50 16 44 H 0.06 -1.86 8.14 -2.39 -0.02 -1.88 16 45 H 0.09 -3.72 8.14 -2.39 -0.02 -3.74 16 46 H 0.06 -2.73 6.50 -2.39 -0.02 -2.74 16 47 H 0.09 -3.95 8.14 -2.39 -0.02 -3.97 16 Total: 1.00 -75.07 350.27 0.97 -74.10 By element: Atomic # 1 Polarization: -150.74 SS G_CDS: -0.87 Total: -151.61 kcal Atomic # 6 Polarization: 27.14 SS G_CDS: 5.76 Total: 32.90 kcal Atomic # 7 Polarization: 52.74 SS G_CDS: -4.06 Total: 48.68 kcal Atomic # 8 Polarization: 7.13 SS G_CDS: -1.90 Total: 5.22 kcal Atomic # 14 Polarization: -11.33 SS G_CDS: 2.05 Total: -9.28 kcal Total: -75.07 0.97 -74.10 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17508148_13915762.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 187.264 kcal (2) G-P(sol) polarization free energy of solvation -75.066 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 112.198 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.971 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -74.095 kcal (6) G-S(sol) free energy of system = (1) + (5) 113.168 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds