Wall clock time and date at job start Mon Mar 8 2021 07:59:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86299 * 109.47504 * 2 1 4 4 C 1.50699 * 109.47178 * 120.00223 * 2 1 3 5 5 C 1.37980 * 120.32693 * 245.01706 * 4 2 1 6 6 N 1.32011 * 120.89831 * 179.72267 * 5 4 2 7 7 C 1.32336 * 121.64705 * 0.52280 * 6 5 4 8 8 N 1.39140 * 119.71675 * 179.75668 * 7 6 5 9 9 C 1.46503 * 120.00227 * 359.72677 * 8 7 6 10 10 H 1.09004 * 112.84877 * 336.19817 * 9 8 7 11 11 C 1.53779 * 113.61630 * 107.50282 * 9 8 7 12 12 C 1.53784 * 87.07962 * 89.11555 * 11 9 8 13 13 H 1.08989 * 113.69402 * 270.87209 * 12 11 9 14 14 C 1.53006 * 113.61171 * 139.97968 * 12 11 9 15 15 N 1.47310 * 110.59750 * 82.50626 * 14 12 11 16 16 C 1.34522 * 106.62374 * 118.52491 * 15 14 12 17 17 O 1.21536 * 123.77501 * 180.02562 * 16 15 14 18 18 N 1.33798 * 112.45524 * 0.02562 * 16 15 14 19 19 C 1.34769 * 111.64151 * 359.97438 * 18 16 15 20 20 O 1.21237 * 127.15365 * 180.02562 * 19 18 16 21 21 C 1.53779 * 113.61675 * 205.00270 * 9 8 7 22 22 C 1.39337 * 120.56508 * 359.48258 * 7 6 5 23 23 F 1.35102 * 120.47596 * 180.27431 * 22 7 6 24 24 C 1.38449 * 119.05837 * 0.24981 * 22 7 6 25 25 H 0.96698 * 113.99995 * 300.00255 * 1 2 3 26 26 H 1.09003 * 109.46747 * 239.99852 * 2 1 3 27 27 H 1.48494 * 109.99999 * 178.68156 * 3 2 1 28 28 H 1.48505 * 109.99723 * 300.00479 * 3 2 1 29 29 H 1.08002 * 119.55196 * 359.97438 * 5 4 2 30 30 H 0.97000 * 120.00257 * 179.72891 * 8 7 6 31 31 H 1.09005 * 113.61110 * 334.57349 * 11 9 8 32 32 H 1.08996 * 113.61577 * 203.66940 * 11 9 8 33 33 H 1.08997 * 110.53258 * 319.67505 * 14 12 11 34 34 H 0.97002 * 126.68821 * 298.56418 * 15 14 12 35 35 H 0.97000 * 124.17775 * 179.97438 * 18 16 15 36 36 H 1.08999 * 113.61946 * 156.33381 * 21 9 8 37 37 H 1.09002 * 113.69216 * 25.44007 * 21 9 8 38 38 H 1.08001 * 120.76150 * 179.97438 * 24 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.6378 -0.0202 2.1939 6 7 3.0784 -0.6300 3.2786 7 6 2.8717 -1.9213 3.4816 8 7 3.3584 -2.5244 4.6371 9 6 4.1014 -1.7318 5.6200 10 1 4.5603 -0.8429 5.1871 11 6 3.3124 -1.4536 6.9103 12 6 3.8917 -2.7700 7.4549 13 1 3.2825 -3.6444 7.2262 14 6 4.2978 -2.6977 8.9283 15 7 3.1274 -2.9025 9.7991 16 6 3.3757 -4.0082 10.5239 17 8 2.6069 -4.4625 11.3483 18 7 4.5637 -4.5521 10.2357 19 6 5.2143 -3.8507 9.2864 20 8 6.3055 -4.0919 8.8165 21 6 5.0647 -2.5648 6.4819 22 6 2.1659 -2.6808 2.5507 23 9 1.9512 -3.9978 2.7624 24 6 1.6873 -2.0667 1.4059 25 1 -0.3933 0.4417 0.7650 26 1 1.7922 -0.5139 -0.8900 27 1 3.5346 1.7701 0.0321 28 1 1.5615 2.4679 -1.2085 29 1 2.8295 1.0343 2.0607 30 1 3.2059 -3.4698 4.7920 31 1 2.2311 -1.4758 6.7742 32 1 3.6542 -0.5701 7.4493 33 1 4.7759 -1.7428 9.1467 34 1 2.3323 -2.3484 9.8412 35 1 4.9135 -5.3523 10.6578 36 1 5.8857 -1.9850 6.9038 37 1 5.3991 -3.4841 6.0011 38 1 1.1372 -2.6292 0.6661 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_17522898_17656566.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:59:06 Heat of formation + Delta-G solvation = -40.746936 kcal Electronic energy + Delta-G solvation = -26724.449495 eV Core-core repulsion = 22485.161582 eV Total energy + Delta-G solvation = -4239.287913 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 323.111 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -49.93083 -43.53483 -41.58313 -40.47134 -39.62012 -38.03629 -37.23639 -35.70283 -34.55506 -33.24729 -31.40611 -29.47098 -27.06514 -26.56651 -25.69545 -24.49031 -23.77794 -23.06168 -22.61068 -20.74281 -19.68305 -19.32859 -18.60090 -18.28960 -18.02217 -17.71277 -17.58609 -17.19812 -17.00135 -16.56872 -16.52896 -16.23507 -16.05579 -15.66980 -15.62279 -15.41574 -15.25016 -14.83438 -14.37198 -14.26233 -14.05629 -13.77700 -13.64576 -13.56364 -12.76716 -12.63636 -12.41228 -12.14466 -11.94961 -11.83503 -11.48785 -11.32384 -11.18519 -10.75285 -10.73331 -10.61893 -10.51569 -8.86905 -5.13438 -0.13834 0.04911 0.45020 1.17935 1.27936 1.54601 1.80444 1.89466 1.90180 1.97475 2.47353 2.67874 2.97373 3.10343 3.18519 3.34881 3.38876 3.42962 3.53246 3.58903 3.63446 3.77200 3.90745 4.07577 4.19474 4.34411 4.38760 4.45931 4.48681 4.61947 4.64661 4.75109 4.79205 4.90652 4.91535 4.93932 5.33868 5.60129 5.77596 5.86629 6.06776 6.23839 6.47965 6.85981 7.01660 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.056 4.056 3 Si 0.685 3.315 4 C -0.208 4.208 5 C 0.149 3.851 6 N -0.509 5.509 7 C 0.392 3.608 8 N -0.701 5.701 9 C 0.135 3.865 10 H 0.114 0.886 11 C -0.142 4.142 12 C -0.118 4.118 13 H 0.101 0.899 14 C 0.102 3.898 15 N -0.720 5.720 16 C 0.703 3.297 17 O -0.540 6.540 18 N -0.681 5.681 19 C 0.527 3.473 20 O -0.459 6.459 21 C -0.135 4.135 22 C -0.019 4.019 23 F -0.133 7.133 24 C -0.037 4.037 25 H 0.380 0.620 26 H 0.115 0.885 27 H -0.253 1.253 28 H -0.251 1.251 29 H 0.164 0.836 30 H 0.412 0.588 31 H 0.078 0.922 32 H 0.099 0.901 33 H 0.133 0.867 34 H 0.443 0.557 35 H 0.434 0.566 36 H 0.107 0.893 37 H 0.081 0.919 38 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.125 4.844 -0.116 4.847 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.167 4.167 3 Si 0.586 3.414 4 C -0.213 4.213 5 C -0.008 4.008 6 N -0.226 5.226 7 C 0.154 3.846 8 N -0.333 5.333 9 C 0.029 3.971 10 H 0.132 0.868 11 C -0.181 4.181 12 C -0.137 4.137 13 H 0.119 0.881 14 C -0.007 4.007 15 N -0.386 5.386 16 C 0.402 3.598 17 O -0.413 6.413 18 N -0.352 5.352 19 C 0.312 3.688 20 O -0.327 6.327 21 C -0.173 4.173 22 C -0.045 4.045 23 F -0.112 7.112 24 C -0.064 4.064 25 H 0.227 0.773 26 H 0.133 0.867 27 H -0.178 1.178 28 H -0.176 1.176 29 H 0.181 0.819 30 H 0.250 0.750 31 H 0.097 0.903 32 H 0.118 0.882 33 H 0.150 0.850 34 H 0.287 0.713 35 H 0.277 0.723 36 H 0.125 0.875 37 H 0.099 0.901 38 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges 1.183 5.354 -0.188 5.486 hybrid contribution -0.681 -2.002 -0.387 2.150 sum 0.503 3.352 -0.576 3.438 Atomic orbital electron populations 1.86521 1.17037 1.81665 1.49295 1.24872 0.85259 1.09958 0.96626 0.94913 0.81158 0.77493 0.87847 1.20951 1.05557 0.94623 1.00170 1.22324 0.91722 0.99260 0.87525 1.67273 1.24822 1.07192 1.23289 1.18367 0.90496 0.88983 0.86738 1.44219 1.59053 1.11731 1.18313 1.21777 0.92193 0.95508 0.87643 0.86792 1.23537 1.01419 0.96298 0.96838 1.22928 0.99828 1.00781 0.90189 0.88072 1.22195 0.86274 0.99775 0.92434 1.45535 1.22133 1.29182 1.41706 1.15885 0.81447 0.81028 0.81466 1.91100 1.49302 1.65424 1.35501 1.44366 1.19671 1.30762 1.40447 1.20803 0.85952 0.83884 0.78152 1.90879 1.17973 1.70522 1.53330 1.23377 0.96517 1.01723 0.95711 1.18004 1.08529 0.79556 0.98427 1.91500 1.93627 1.31208 1.94893 1.21304 0.95515 0.94462 0.95096 0.77295 0.86718 1.17805 1.17597 0.81945 0.75036 0.90323 0.88231 0.84989 0.71261 0.72313 0.87494 0.90068 0.83295 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.60 12.84 -35.23 -0.45 0.15 16 2 C -0.06 0.10 2.82 36.01 0.10 0.20 16 3 Si 0.68 -1.79 29.83 -169.99 -5.07 -6.86 16 4 C -0.21 0.24 5.36 -104.47 -0.56 -0.32 16 5 C 0.15 -0.19 9.84 -17.57 -0.17 -0.37 16 6 N -0.51 -0.04 9.13 -12.37 -0.11 -0.15 16 7 C 0.39 0.08 7.49 -154.86 -1.16 -1.08 16 8 N -0.70 1.14 5.41 -53.06 -0.29 0.85 16 9 C 0.13 -0.41 4.35 -67.12 -0.29 -0.71 16 10 H 0.11 -0.25 7.41 -51.93 -0.38 -0.64 16 11 C -0.14 0.66 7.44 -25.92 -0.19 0.47 16 12 C -0.12 0.51 3.36 -89.80 -0.30 0.21 16 13 H 0.10 -0.37 8.14 -51.94 -0.42 -0.79 16 14 C 0.10 -0.41 3.44 -68.20 -0.23 -0.65 16 15 N -0.72 2.28 6.24 -59.19 -0.37 1.91 16 16 C 0.70 0.16 8.99 -88.02 -0.79 -0.63 16 17 O -0.54 -2.50 18.04 5.33 0.10 -2.40 16 18 N -0.68 0.88 5.70 -15.79 -0.09 0.79 16 19 C 0.53 -0.69 8.00 -10.56 -0.08 -0.77 16 20 O -0.46 -0.70 17.48 5.59 0.10 -0.60 16 21 C -0.13 0.49 6.65 -25.92 -0.17 0.32 16 22 C -0.02 -0.01 7.35 -39.10 -0.29 -0.30 16 23 F -0.13 -0.20 16.65 2.25 0.04 -0.16 16 24 C -0.04 0.00 9.82 -39.25 -0.39 -0.38 16 25 H 0.38 -1.88 8.70 45.56 0.40 -1.49 16 26 H 0.12 -0.15 7.96 -51.93 -0.41 -0.57 16 27 H -0.25 0.08 7.11 56.52 0.40 0.49 16 28 H -0.25 -0.22 7.11 56.52 0.40 0.18 16 29 H 0.16 -0.61 4.91 -52.49 -0.26 -0.86 16 30 H 0.41 -0.92 8.17 -40.82 -0.33 -1.25 16 31 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 32 H 0.10 -0.59 8.03 -51.93 -0.42 -1.00 16 33 H 0.13 -0.78 8.05 -51.93 -0.42 -1.20 16 34 H 0.44 -2.10 8.96 -40.82 -0.37 -2.47 16 35 H 0.43 -1.06 8.96 -40.82 -0.37 -1.42 16 36 H 0.11 -0.44 8.10 -51.93 -0.42 -0.86 16 37 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 38 H 0.15 -0.12 8.06 -52.49 -0.42 -0.54 16 LS Contribution 332.20 15.07 5.01 5.01 Total: 0.00 -9.69 332.20 -9.55 -19.23 By element: Atomic # 1 Polarization: -9.89 SS G_CDS: -3.87 Total: -13.76 kcal Atomic # 6 Polarization: 0.52 SS G_CDS: -4.53 Total: -4.01 kcal Atomic # 7 Polarization: 4.27 SS G_CDS: -0.86 Total: 3.41 kcal Atomic # 8 Polarization: -2.59 SS G_CDS: -0.26 Total: -2.85 kcal Atomic # 9 Polarization: -0.20 SS G_CDS: 0.04 Total: -0.16 kcal Atomic # 14 Polarization: -1.79 SS G_CDS: -5.07 Total: -6.86 kcal Total LS contribution 5.01 Total: 5.01 kcal Total: -9.69 -9.55 -19.23 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17522898_17656566.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -21.512 kcal (2) G-P(sol) polarization free energy of solvation -9.687 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -31.199 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.548 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.235 kcal (6) G-S(sol) free energy of system = (1) + (5) -40.747 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds