Wall clock time and date at job start Mon Mar 8 2021 10:02:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86303 * 109.47128 * 2 1 4 4 C 1.50696 * 109.47458 * 120.00323 * 2 1 3 5 5 C 1.38603 * 120.72147 * 64.99539 * 4 2 1 6 6 N 1.32269 * 119.20104 * 179.97438 * 5 4 2 7 7 C 1.32503 * 120.74013 * 0.02562 * 6 5 4 8 8 N 1.38406 * 119.21743 * 180.02562 * 7 6 5 9 9 C 1.46501 * 119.99387 * 179.97438 * 8 7 6 10 10 C 1.53000 * 109.46677 * 179.97438 * 9 8 7 11 11 H 1.09004 * 112.85086 * 43.80371 * 10 9 8 12 12 C 1.53779 * 113.61428 * 174.99701 * 10 9 8 13 13 C 1.53780 * 87.08158 * 139.98033 * 12 10 9 14 14 H 1.09005 * 113.61346 * 89.20184 * 13 12 10 15 15 N 1.46497 * 113.61650 * 220.01961 * 13 12 10 16 16 C 1.35317 * 125.87017 * 84.99943 * 15 13 12 17 17 C 1.35348 * 106.17735 * 180.21003 * 16 15 13 18 18 N 1.33774 * 106.49647 * 359.63857 * 17 16 15 19 19 N 1.28636 * 108.88665 * 0.37294 * 18 17 16 20 20 C 1.53780 * 87.08215 * 334.57021 * 13 12 10 21 21 N 1.32493 * 121.55946 * 0.27033 * 7 6 5 22 22 C 1.32275 * 120.74283 * 359.44484 * 21 7 6 23 23 H 0.96700 * 113.99691 * 300.00021 * 1 2 3 24 24 H 1.09000 * 109.46581 * 240.00169 * 2 1 3 25 25 H 1.48504 * 109.99881 * 300.00350 * 3 2 1 26 26 H 1.48494 * 109.99849 * 61.32195 * 3 2 1 27 27 H 1.08010 * 120.40070 * 0.02562 * 5 4 2 28 28 H 0.96998 * 120.00007 * 359.97438 * 8 7 6 29 29 H 1.08998 * 109.47698 * 59.99913 * 9 8 7 30 30 H 1.09002 * 109.47083 * 299.99210 * 9 8 7 31 31 H 1.08996 * 113.61633 * 25.43356 * 12 10 9 32 32 H 1.09002 * 113.69179 * 254.54005 * 12 10 9 33 33 H 1.08002 * 126.90702 * 359.93974 * 16 15 13 34 34 H 1.08002 * 126.75326 * 179.78134 * 17 16 15 35 35 H 1.09001 * 113.61689 * 139.98171 * 20 13 12 36 36 H 1.09002 * 113.61139 * 270.88379 * 20 13 12 37 37 H 1.07997 * 120.40012 * 180.25502 * 22 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.6927 -2.0634 1.4139 6 7 2.1479 -2.6568 2.5048 7 6 2.8244 -1.9727 3.4159 8 7 3.2868 -2.6254 4.5454 9 6 4.0371 -1.8857 5.5632 10 6 4.4276 -2.8341 6.6985 11 1 4.8012 -3.7931 6.3394 12 6 5.3256 -2.1830 7.7636 13 6 4.5059 -2.9531 8.8124 14 1 4.9009 -3.9447 9.0333 15 7 4.2169 -2.1741 10.0190 16 6 3.1838 -1.3151 10.1796 17 6 3.2998 -0.8159 11.4324 18 7 4.3792 -1.3925 11.9726 19 7 4.9018 -2.1896 11.1087 20 6 3.3546 -2.9596 7.7929 21 7 3.0646 -0.6775 3.2735 22 6 2.6420 -0.0251 2.2032 23 1 -0.3933 0.4417 0.7651 24 1 1.7923 -0.5138 -0.8900 25 1 1.5614 2.4679 -1.2085 26 1 1.5880 2.4585 1.2242 27 1 1.1422 -2.6265 0.6746 28 1 3.1140 -3.5726 4.6629 29 1 3.4168 -1.0816 5.9592 30 1 4.9371 -1.4637 5.1160 31 1 5.2116 -1.1010 7.8288 32 1 6.3682 -2.4962 7.7084 33 1 2.4227 -1.0728 9.4527 34 1 2.6476 -0.0957 11.9040 35 1 2.8056 -3.9007 7.7603 36 1 2.7017 -2.0899 7.8661 37 1 2.8445 1.0298 2.0909 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_17567460_12175864.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:02:08 Heat of formation + Delta-G solvation = 165.284502 kcal Electronic energy + Delta-G solvation = -21788.901498 eV Core-core repulsion = 18378.976698 eV Total energy + Delta-G solvation = -3409.924801 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 289.128 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -44.22653 -42.15982 -40.73653 -38.35353 -36.83006 -34.77921 -34.30522 -32.62737 -31.97355 -29.32689 -27.34865 -26.57331 -26.04397 -24.93823 -23.59571 -23.18091 -22.34510 -20.94716 -19.57188 -18.89211 -18.68583 -18.14263 -17.47356 -16.90441 -16.70114 -16.20377 -16.14714 -16.05771 -15.88878 -15.64242 -15.19796 -14.85443 -14.65303 -14.05364 -13.96615 -13.82231 -13.49652 -13.24121 -12.92092 -12.63641 -12.30393 -12.18894 -12.05877 -11.92518 -11.81104 -11.70906 -11.40889 -11.00116 -10.79112 -10.32513 -10.10069 -9.22537 -5.08227 -0.01418 0.08868 0.62823 1.15876 1.29181 1.45918 1.67152 1.69105 1.86221 2.73284 2.74903 2.89172 3.04022 3.15731 3.24873 3.28329 3.52531 3.54673 3.63602 3.71090 3.73729 3.91688 4.02751 4.11726 4.13522 4.20979 4.32076 4.33379 4.44502 4.47324 4.51292 4.57732 4.66177 4.75474 4.88445 5.11591 5.22982 5.61634 5.65483 5.89788 6.28088 6.28546 7.20183 7.59799 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.529 6.529 2 C -0.053 4.053 3 Si 0.679 3.321 4 C -0.291 4.291 5 C 0.224 3.776 6 N -0.569 5.569 7 C 0.566 3.434 8 N -0.696 5.696 9 C 0.150 3.850 10 C -0.119 4.119 11 H 0.111 0.889 12 C -0.130 4.130 13 C 0.115 3.885 14 H 0.137 0.863 15 N -0.281 5.281 16 C -0.052 4.052 17 C -0.050 4.050 18 N -0.272 5.272 19 N -0.085 5.085 20 C -0.138 4.138 21 N -0.563 5.563 22 C 0.198 3.802 23 H 0.376 0.624 24 H 0.121 0.879 25 H -0.253 1.253 26 H -0.258 1.258 27 H 0.171 0.829 28 H 0.416 0.584 29 H 0.072 0.928 30 H 0.076 0.924 31 H 0.098 0.902 32 H 0.093 0.907 33 H 0.188 0.812 34 H 0.190 0.810 35 H 0.091 0.909 36 H 0.100 0.900 37 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.086 0.189 -4.319 4.324 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.165 4.165 3 Si 0.580 3.420 4 C -0.299 4.299 5 C 0.056 3.944 6 N -0.290 5.290 7 C 0.209 3.791 8 N -0.333 5.333 9 C 0.025 3.975 10 C -0.139 4.139 11 H 0.129 0.871 12 C -0.169 4.169 13 C 0.013 3.987 14 H 0.155 0.845 15 N -0.075 5.075 16 C -0.202 4.202 17 C -0.207 4.207 18 N -0.137 5.137 19 N -0.064 5.064 20 C -0.177 4.177 21 N -0.285 5.285 22 C 0.030 3.970 23 H 0.223 0.777 24 H 0.138 0.862 25 H -0.177 1.177 26 H -0.182 1.182 27 H 0.188 0.812 28 H 0.253 0.747 29 H 0.090 0.910 30 H 0.094 0.906 31 H 0.116 0.884 32 H 0.112 0.888 33 H 0.205 0.795 34 H 0.207 0.793 35 H 0.110 0.890 36 H 0.118 0.882 37 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges 1.482 -0.270 -3.117 3.462 hybrid contribution -2.465 0.288 -0.818 2.614 sum -0.983 0.018 -3.935 4.056 Atomic orbital electron populations 1.86621 1.17737 1.79857 1.49330 1.24677 0.83776 1.10577 0.97447 0.95175 0.91485 0.74533 0.80774 1.21659 1.08969 0.97730 1.01528 1.22856 0.89085 0.90975 0.91520 1.67983 1.16530 1.40042 1.04465 1.19377 0.87202 0.85551 0.86934 1.44089 1.58925 1.12180 1.18131 1.21278 0.96233 0.93435 0.86529 1.22638 0.96963 1.00739 0.93540 0.87074 1.23403 1.00126 1.01233 0.92125 1.23391 0.99770 0.96416 0.79082 0.84506 1.47514 1.18341 1.29114 1.12519 1.23580 0.96948 0.98519 1.01174 1.23682 0.99127 1.04590 0.93312 1.75166 1.08720 1.07001 1.22839 1.78350 1.19007 1.18799 0.90285 1.23595 0.96279 1.04915 0.92899 1.67932 1.27144 1.08220 1.25230 1.22847 0.88086 0.99481 0.86554 0.77668 0.86168 1.17713 1.18246 0.81211 0.74676 0.90990 0.90570 0.88381 0.88824 0.79489 0.79256 0.88996 0.88208 0.81632 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.24 12.85 -35.23 -0.45 -0.21 16 2 C -0.05 0.11 2.83 36.00 0.10 0.21 16 3 Si 0.68 -1.73 29.95 -169.99 -5.09 -6.82 16 4 C -0.29 0.31 5.36 -104.35 -0.56 -0.25 16 5 C 0.22 -0.01 10.99 -17.23 -0.19 -0.20 16 6 N -0.57 -0.84 10.46 -13.93 -0.15 -0.98 16 7 C 0.57 0.54 8.43 -322.80 -2.72 -2.18 16 8 N -0.70 1.25 5.70 -62.30 -0.36 0.89 16 9 C 0.15 -0.52 5.49 -4.04 -0.02 -0.54 16 10 C -0.12 0.64 3.75 -89.81 -0.34 0.30 16 11 H 0.11 -0.69 8.14 -51.93 -0.42 -1.11 16 12 C -0.13 0.55 7.44 -25.92 -0.19 0.35 16 13 C 0.12 -0.36 4.96 -67.12 -0.33 -0.69 16 14 H 0.14 -0.52 8.14 -51.93 -0.42 -0.94 16 15 N -0.28 -0.14 3.53 -53.97 -0.19 -0.33 16 16 C -0.05 0.03 10.78 -17.05 -0.18 -0.15 16 17 C -0.05 -0.07 12.05 -17.74 -0.21 -0.29 16 18 N -0.27 -1.42 12.41 30.24 0.38 -1.04 16 19 N -0.09 -0.38 13.17 60.35 0.79 0.42 16 20 C -0.14 0.71 6.98 -25.92 -0.18 0.53 16 21 N -0.56 -0.52 9.59 -13.93 -0.13 -0.65 16 22 C 0.20 -0.14 9.92 -17.23 -0.17 -0.31 16 23 H 0.38 -1.14 8.70 45.56 0.40 -0.75 16 24 H 0.12 -0.35 7.96 -51.93 -0.41 -0.76 16 25 H -0.25 -0.25 7.11 56.52 0.40 0.15 16 26 H -0.26 0.20 7.02 56.52 0.40 0.59 16 27 H 0.17 -0.30 8.06 -52.48 -0.42 -0.72 16 28 H 0.42 -1.24 8.59 -40.82 -0.35 -1.59 16 29 H 0.07 -0.21 7.84 -51.93 -0.41 -0.61 16 30 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 31 H 0.10 -0.34 8.10 -51.93 -0.42 -0.76 16 32 H 0.09 -0.41 8.14 -51.93 -0.42 -0.83 16 33 H 0.19 -0.81 6.73 -52.49 -0.35 -1.16 16 34 H 0.19 -0.30 8.06 -52.49 -0.42 -0.72 16 35 H 0.09 -0.51 8.14 -51.93 -0.42 -0.93 16 36 H 0.10 -0.52 6.08 -51.93 -0.32 -0.83 16 37 H 0.17 -0.48 5.01 -52.49 -0.26 -0.74 16 LS Contribution 316.60 15.07 4.77 4.77 Total: 0.00 -9.80 316.60 -9.72 -19.52 By element: Atomic # 1 Polarization: -8.06 SS G_CDS: -4.29 Total: -12.35 kcal Atomic # 6 Polarization: 1.79 SS G_CDS: -5.00 Total: -3.21 kcal Atomic # 7 Polarization: -2.04 SS G_CDS: 0.34 Total: -1.70 kcal Atomic # 8 Polarization: 0.24 SS G_CDS: -0.45 Total: -0.21 kcal Atomic # 14 Polarization: -1.73 SS G_CDS: -5.09 Total: -6.82 kcal Total LS contribution 4.77 Total: 4.77 kcal Total: -9.80 -9.72 -19.52 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17567460_12175864.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 184.800 kcal (2) G-P(sol) polarization free energy of solvation -9.797 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 175.003 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.719 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.516 kcal (6) G-S(sol) free energy of system = (1) + (5) 165.285 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds