Wall clock time and date at job start Mon Mar 8 2021 10:06:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86305 * 109.47263 * 2 1 4 4 C 1.50703 * 109.46714 * 119.99322 * 2 1 3 5 5 C 1.38611 * 120.71790 * 65.00313 * 4 2 1 6 6 N 1.32271 * 119.19636 * 179.97438 * 5 4 2 7 7 C 1.32491 * 120.74210 * 0.02562 * 6 5 4 8 8 N 1.38412 * 119.22087 * 180.02562 * 7 6 5 9 9 C 1.46497 * 120.00159 * 179.97438 * 8 7 6 10 10 H 1.08998 * 112.85271 * 23.79964 * 9 8 7 11 11 C 1.53785 * 113.61049 * 154.99246 * 9 8 7 12 12 C 1.53785 * 87.07735 * 89.20096 * 11 9 8 13 13 H 1.09000 * 113.61282 * 270.79658 * 12 11 9 14 14 N 1.46501 * 113.61312 * 139.97882 * 12 11 9 15 15 C 1.35316 * 125.86780 * 274.99462 * 14 12 11 16 16 C 1.35355 * 106.17300 * 179.97438 * 15 14 12 17 17 N 1.33768 * 106.49655 * 0.02562 * 16 15 14 18 18 N 1.28635 * 108.88723 * 359.97438 * 17 16 15 19 19 C 1.53781 * 113.68921 * 252.53064 * 9 8 7 20 20 N 1.32494 * 121.56779 * 0.26883 * 7 6 5 21 21 C 1.32284 * 120.73748 * 359.44783 * 20 7 6 22 22 H 0.96704 * 114.00289 * 300.01012 * 1 2 3 23 23 H 1.08988 * 109.47714 * 239.99495 * 2 1 3 24 24 H 1.48497 * 109.99626 * 299.99574 * 3 2 1 25 25 H 1.48503 * 110.00052 * 61.31520 * 3 2 1 26 26 H 1.07998 * 120.39915 * 359.97438 * 5 4 2 27 27 H 0.97004 * 119.99523 * 359.97438 * 8 7 6 28 28 H 1.08994 * 113.61985 * 334.65495 * 11 9 8 29 29 H 1.09000 * 113.61034 * 203.74484 * 11 9 8 30 30 H 1.07996 * 126.91291 * 0.25267 * 15 14 12 31 31 H 1.08002 * 126.74695 * 179.97438 * 16 15 14 32 32 H 1.09000 * 113.61284 * 156.33087 * 19 9 8 33 33 H 1.08990 * 113.61575 * 25.42147 * 19 9 8 34 34 H 1.07995 * 120.40485 * 180.29200 * 21 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9312 -0.7103 1.2306 5 6 1.6924 -2.0633 1.4142 6 7 2.1475 -2.6565 2.5053 7 6 2.8237 -1.9723 3.4163 8 7 3.2860 -2.6249 4.5460 9 6 4.0360 -1.8851 5.5640 10 1 3.8238 -0.8160 5.5526 11 6 3.9574 -2.5138 6.9653 12 6 5.1963 -3.3388 6.5785 13 1 4.9566 -4.2881 6.0995 14 7 6.1701 -3.4792 7.6640 15 6 7.1435 -2.5924 7.9755 16 6 7.8045 -3.1148 9.0349 17 7 7.2113 -4.2805 9.3156 18 7 6.2466 -4.4673 8.4854 19 6 5.5379 -2.2148 5.5861 20 7 3.0640 -0.6772 3.2740 21 6 2.6416 -0.0248 2.2035 22 1 -0.3934 0.4418 0.7650 23 1 1.7923 -0.5138 -0.8898 24 1 1.5616 2.4678 -1.2085 25 1 1.5878 2.4586 1.2242 26 1 1.1414 -2.6262 0.6753 27 1 3.1132 -3.5722 4.6637 28 1 3.0634 -3.1168 7.1238 29 1 4.1398 -1.8047 7.7727 30 1 7.3486 -1.6543 7.4814 31 1 8.6459 -2.6770 9.5514 32 1 6.1522 -1.4240 6.0167 33 1 5.9197 -2.5764 4.6314 34 1 2.8445 1.0299 2.0908 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_17567476_12175864.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:06:59 Heat of formation + Delta-G solvation = 172.859046 kcal Electronic energy + Delta-G solvation = -20263.503451 eV Core-core repulsion = 17009.444727 eV Total energy + Delta-G solvation = -3254.058725 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 275.112 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -44.23136 -42.28357 -40.72636 -38.26882 -36.04574 -34.84566 -33.90868 -32.09665 -31.86055 -27.41665 -27.32583 -26.41176 -25.79917 -23.67662 -23.38304 -22.86908 -20.85800 -19.93669 -19.05272 -18.47770 -18.22758 -17.40774 -16.80700 -16.68256 -16.26547 -16.03497 -15.96357 -15.80613 -15.51037 -14.96045 -14.71145 -14.28755 -14.07588 -14.01214 -13.48794 -13.28012 -12.69006 -12.65629 -12.34930 -12.14131 -11.97855 -11.84560 -11.72335 -11.52798 -11.00719 -10.82621 -10.32419 -10.16021 -9.35478 -5.11395 -0.09084 0.02044 0.62708 1.12411 1.29662 1.42963 1.50408 1.69001 1.83864 2.62455 2.70873 2.91574 2.99047 3.20333 3.27157 3.39570 3.49000 3.52725 3.57425 3.61077 4.00669 4.04048 4.08900 4.15289 4.24085 4.31304 4.41094 4.44197 4.47498 4.52425 4.66493 4.77869 5.08429 5.23152 5.55729 5.61989 5.80893 6.18206 6.25322 7.11538 7.59793 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.529 6.529 2 C -0.054 4.054 3 Si 0.680 3.320 4 C -0.287 4.287 5 C 0.224 3.776 6 N -0.566 5.566 7 C 0.569 3.431 8 N -0.682 5.682 9 C 0.147 3.853 10 H 0.125 0.875 11 C -0.150 4.150 12 C 0.114 3.886 13 H 0.133 0.867 14 N -0.282 5.282 15 C -0.051 4.051 16 C -0.050 4.050 17 N -0.271 5.271 18 N -0.086 5.086 19 C -0.154 4.154 20 N -0.560 5.560 21 C 0.197 3.803 22 H 0.376 0.624 23 H 0.121 0.879 24 H -0.252 1.252 25 H -0.257 1.257 26 H 0.172 0.828 27 H 0.417 0.583 28 H 0.094 0.906 29 H 0.110 0.890 30 H 0.190 0.810 31 H 0.191 0.809 32 H 0.109 0.891 33 H 0.093 0.907 34 H 0.169 0.831 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.152 5.052 -3.244 6.113 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.166 4.166 3 Si 0.581 3.419 4 C -0.295 4.295 5 C 0.056 3.944 6 N -0.287 5.287 7 C 0.213 3.787 8 N -0.319 5.319 9 C 0.039 3.961 10 H 0.143 0.857 11 C -0.189 4.189 12 C 0.012 3.988 13 H 0.151 0.849 14 N -0.075 5.075 15 C -0.202 4.202 16 C -0.207 4.207 17 N -0.137 5.137 18 N -0.065 5.065 19 C -0.195 4.195 20 N -0.282 5.282 21 C 0.030 3.970 22 H 0.224 0.776 23 H 0.139 0.861 24 H -0.177 1.177 25 H -0.182 1.182 26 H 0.189 0.811 27 H 0.255 0.745 28 H 0.113 0.887 29 H 0.128 0.872 30 H 0.207 0.793 31 H 0.208 0.792 32 H 0.127 0.873 33 H 0.111 0.889 34 H 0.185 0.815 Dipole moment (debyes) X Y Z Total from point charges 0.850 3.816 -2.401 4.588 hybrid contribution -0.955 0.888 -0.574 1.425 sum -0.106 4.704 -2.974 5.566 Atomic orbital electron populations 1.86624 1.17667 1.79841 1.49363 1.24693 0.83835 1.10629 0.97410 0.95203 0.91418 0.74470 0.80838 1.21701 1.08573 0.97706 1.01501 1.22881 0.89044 0.90994 0.91455 1.67970 1.16304 1.40047 1.04387 1.19288 0.87075 0.85545 0.86788 1.43763 1.58361 1.11897 1.17848 1.21567 0.90003 0.98486 0.86029 0.85677 1.23882 0.97674 0.99617 0.97747 1.23538 0.88236 1.01326 0.85666 0.84882 1.47500 1.22847 1.14091 1.23084 1.23611 0.94315 1.00028 1.02210 1.23693 1.03841 0.94411 0.98773 1.75164 1.03859 1.16183 1.18503 1.78353 1.16872 1.10897 1.00405 1.24011 0.98600 0.97262 0.99586 1.67903 1.27053 1.08103 1.25140 1.22870 0.88076 0.99533 0.86508 0.77620 0.86113 1.17689 1.18197 0.81087 0.74486 0.88747 0.87215 0.79279 0.79209 0.87267 0.88875 0.81484 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.40 12.85 -35.23 -0.45 -0.05 16 2 C -0.05 0.13 2.83 36.01 0.10 0.23 16 3 Si 0.68 -2.03 29.95 -169.99 -5.09 -7.12 16 4 C -0.29 0.47 5.36 -104.35 -0.56 -0.09 16 5 C 0.22 -0.11 10.99 -17.22 -0.19 -0.30 16 6 N -0.57 -0.58 10.46 -13.93 -0.15 -0.72 16 7 C 0.57 0.19 8.43 -322.80 -2.72 -2.53 16 8 N -0.68 1.43 5.41 -55.00 -0.30 1.13 16 9 C 0.15 -0.53 4.33 -67.12 -0.29 -0.82 16 10 H 0.13 -0.38 7.36 -51.93 -0.38 -0.77 16 11 C -0.15 0.56 7.63 -25.91 -0.20 0.36 16 12 C 0.11 -0.32 4.84 -67.11 -0.32 -0.64 16 13 H 0.13 -0.42 8.14 -51.93 -0.42 -0.84 16 14 N -0.28 -0.13 3.53 -53.97 -0.19 -0.32 16 15 C -0.05 0.05 10.78 -17.04 -0.18 -0.14 16 16 C -0.05 -0.06 12.05 -17.74 -0.21 -0.27 16 17 N -0.27 -1.39 12.41 30.24 0.38 -1.02 16 18 N -0.09 -0.38 13.16 60.35 0.79 0.41 16 19 C -0.15 0.66 7.23 -25.92 -0.19 0.48 16 20 N -0.56 -0.01 9.13 -13.93 -0.13 -0.14 16 21 C 0.20 -0.28 9.92 -17.22 -0.17 -0.45 16 22 H 0.38 -1.26 8.70 45.56 0.40 -0.86 16 23 H 0.12 -0.40 7.96 -51.94 -0.41 -0.81 16 24 H -0.25 -0.16 7.11 56.52 0.40 0.24 16 25 H -0.26 0.32 7.02 56.52 0.40 0.72 16 26 H 0.17 -0.36 8.06 -52.49 -0.42 -0.78 16 27 H 0.42 -1.24 8.82 -40.82 -0.36 -1.60 16 28 H 0.09 -0.34 8.14 -51.93 -0.42 -0.76 16 29 H 0.11 -0.41 8.14 -51.93 -0.42 -0.83 16 30 H 0.19 -0.93 6.73 -52.49 -0.35 -1.29 16 31 H 0.19 -0.36 8.06 -52.49 -0.42 -0.78 16 32 H 0.11 -0.61 6.33 -51.93 -0.33 -0.94 16 33 H 0.09 -0.34 8.14 -51.93 -0.42 -0.76 16 34 H 0.17 -0.61 5.01 -52.49 -0.26 -0.87 16 LS Contribution 295.01 15.07 4.45 4.45 Total: 0.00 -9.44 295.01 -9.07 -18.51 By element: Atomic # 1 Polarization: -7.50 SS G_CDS: -3.44 Total: -10.94 kcal Atomic # 6 Polarization: 0.75 SS G_CDS: -4.94 Total: -4.18 kcal Atomic # 7 Polarization: -1.07 SS G_CDS: 0.41 Total: -0.66 kcal Atomic # 8 Polarization: 0.40 SS G_CDS: -0.45 Total: -0.05 kcal Atomic # 14 Polarization: -2.03 SS G_CDS: -5.09 Total: -7.12 kcal Total LS contribution 4.45 Total: 4.45 kcal Total: -9.44 -9.07 -18.51 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17567476_12175864.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 191.372 kcal (2) G-P(sol) polarization free energy of solvation -9.445 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 181.927 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.068 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.513 kcal (6) G-S(sol) free energy of system = (1) + (5) 172.859 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.51 seconds