Wall clock time and date at job start Mon Mar 8 2021 10:08:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86301 * 109.47174 * 2 1 4 4 C 1.50701 * 109.47063 * 119.99927 * 2 1 3 5 5 C 1.38599 * 120.72285 * 65.00164 * 4 2 1 6 6 N 1.32282 * 119.20315 * 179.97438 * 5 4 2 7 7 C 1.32500 * 120.73466 * 359.97438 * 6 5 4 8 8 N 1.38404 * 119.21183 * 180.02562 * 7 6 5 9 9 C 1.46509 * 119.99560 * 180.02562 * 8 7 6 10 10 H 1.09004 * 112.84746 * 331.22826 * 9 8 7 11 11 C 1.53773 * 113.61267 * 102.53224 * 9 8 7 12 12 C 1.53784 * 87.07952 * 89.11798 * 11 9 8 13 13 H 1.09001 * 113.61750 * 139.98375 * 12 11 9 14 14 N 1.46507 * 113.68826 * 270.87003 * 12 11 9 15 15 C 1.34947 * 126.03688 * 349.33285 * 14 12 11 16 16 C 1.35313 * 107.74462 * 179.83986 * 15 14 12 17 17 C 1.39866 * 107.92087 * 0.42473 * 16 15 14 18 18 N 1.30838 * 108.20306 * 359.73729 * 17 16 15 19 19 C 1.53775 * 87.08285 * 25.42864 * 12 11 9 20 20 N 1.32492 * 121.56657 * 0.02562 * 7 6 5 21 21 C 1.32279 * 120.74162 * 359.97438 * 20 7 6 22 22 H 0.96693 * 113.99523 * 59.99806 * 1 2 3 23 23 H 1.08996 * 109.47481 * 239.99823 * 2 1 3 24 24 H 1.48506 * 109.99774 * 59.99934 * 3 2 1 25 25 H 1.48498 * 110.00066 * 181.31725 * 3 2 1 26 26 H 1.08006 * 120.39988 * 0.24847 * 5 4 2 27 27 H 0.96989 * 120.00366 * 359.97438 * 8 7 6 28 28 H 1.08998 * 113.61557 * 203.66221 * 11 9 8 29 29 H 1.08999 * 113.61948 * 334.56625 * 11 9 8 30 30 H 1.08002 * 126.12567 * 359.97438 * 15 14 12 31 31 H 1.08005 * 126.03490 * 180.15686 * 16 15 14 32 32 H 1.07995 * 125.89707 * 179.72048 * 17 16 15 33 33 H 1.08998 * 113.61438 * 220.02182 * 19 12 11 34 34 H 1.09002 * 113.68998 * 89.12823 * 19 12 11 35 35 H 1.07998 * 120.39702 * 179.97438 * 21 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.6927 -2.0633 1.4141 6 7 2.1478 -2.6567 2.5051 7 6 2.8250 -1.9727 3.4157 8 7 3.2872 -2.6254 4.5452 9 6 4.0374 -1.8856 5.5632 10 1 4.5879 -1.0394 5.1518 11 6 3.2054 -1.5350 6.8080 12 6 3.6486 -2.8883 7.3886 13 1 3.8847 -2.8510 8.4521 14 7 2.7565 -3.9978 7.0426 15 6 1.5402 -3.8890 6.4682 16 6 1.0447 -5.1384 6.3121 17 6 1.9863 -6.0411 6.8170 18 7 3.0129 -5.3584 7.2551 19 6 4.8843 -2.7849 6.4792 20 7 3.0702 -0.6787 3.2705 21 6 2.6430 -0.0252 2.2027 22 1 -0.3932 0.4417 -0.7650 23 1 1.7924 -0.5138 -0.8899 24 1 1.5615 2.4679 1.2085 25 1 3.5346 1.7703 -0.0321 26 1 1.1454 -2.6272 0.6731 27 1 3.1139 -3.5723 4.6632 28 1 3.5872 -0.6767 7.3609 29 1 2.1346 -1.4726 6.6142 30 1 1.0510 -2.9696 6.1822 31 1 0.0888 -5.3932 5.8786 32 1 1.8835 -7.1158 6.8412 33 1 5.1688 -3.7315 6.0198 34 1 5.7259 -2.2686 6.9409 35 1 2.8457 1.0296 2.0903 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_17567480_12175864.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:08:19 Heat of formation + Delta-G solvation = 157.390815 kcal Electronic energy + Delta-G solvation = -20984.868617 eV Core-core repulsion = 17795.565050 eV Total energy + Delta-G solvation = -3189.303567 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 274.117 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -42.62705 -41.98967 -40.03564 -37.98519 -35.66998 -34.74228 -32.61194 -31.81891 -30.87174 -27.17595 -27.01155 -26.07452 -25.36739 -23.24350 -22.39794 -21.81455 -20.25960 -19.68967 -18.64595 -18.34656 -18.14502 -17.24861 -16.53926 -16.33124 -16.07870 -15.78678 -15.32951 -15.25667 -15.07988 -14.78236 -14.52371 -14.11912 -14.00781 -13.78515 -13.26265 -13.19656 -12.96838 -12.33657 -12.27676 -11.89144 -11.87215 -11.80960 -11.47376 -11.33636 -10.62890 -10.31519 -9.99110 -9.50068 -9.18234 -5.09720 -0.00133 0.11547 0.96367 1.17198 1.40981 1.54058 1.70649 1.84402 1.98764 2.71466 2.92432 3.04087 3.17387 3.32545 3.44781 3.54284 3.63728 3.84124 3.84807 3.87673 4.05765 4.06684 4.37713 4.39862 4.42925 4.48866 4.56647 4.64413 4.66389 4.73960 4.79201 4.90857 5.15448 5.18830 5.70646 5.76087 5.92476 6.08531 6.32853 6.54655 6.80125 7.23085 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.548 6.548 2 C -0.051 4.051 3 Si 0.681 3.319 4 C -0.246 4.246 5 C 0.227 3.773 6 N -0.563 5.563 7 C 0.569 3.431 8 N -0.679 5.679 9 C 0.135 3.865 10 H 0.114 0.886 11 C -0.156 4.156 12 C 0.131 3.869 13 H 0.108 0.892 14 N -0.361 5.361 15 C 0.056 3.944 16 C -0.269 4.269 17 C 0.047 3.953 18 N -0.292 5.292 19 C -0.150 4.150 20 N -0.560 5.560 21 C 0.193 3.807 22 H 0.384 0.616 23 H 0.076 0.924 24 H -0.249 1.249 25 H -0.253 1.253 26 H 0.173 0.827 27 H 0.417 0.583 28 H 0.119 0.881 29 H 0.082 0.918 30 H 0.167 0.833 31 H 0.148 0.852 32 H 0.185 0.815 33 H 0.086 0.914 34 H 0.119 0.881 35 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.654 3.889 -3.669 5.386 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.354 6.354 2 C -0.163 4.163 3 Si 0.582 3.418 4 C -0.254 4.254 5 C 0.059 3.941 6 N -0.284 5.284 7 C 0.212 3.788 8 N -0.317 5.317 9 C 0.029 3.971 10 H 0.132 0.868 11 C -0.196 4.196 12 C 0.028 3.972 13 H 0.126 0.874 14 N -0.144 5.144 15 C -0.090 4.090 16 C -0.299 4.299 17 C -0.140 4.140 18 N -0.113 5.113 19 C -0.189 4.189 20 N -0.282 5.282 21 C 0.026 3.974 22 H 0.232 0.768 23 H 0.094 0.906 24 H -0.173 1.173 25 H -0.177 1.177 26 H 0.190 0.810 27 H 0.256 0.744 28 H 0.138 0.862 29 H 0.101 0.899 30 H 0.184 0.816 31 H 0.166 0.834 32 H 0.202 0.798 33 H 0.105 0.895 34 H 0.137 0.863 35 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges 1.626 3.826 -1.115 4.304 hybrid contribution -1.286 -0.440 -0.916 1.639 sum 0.340 3.385 -2.031 3.962 Atomic orbital electron populations 1.86491 1.17234 1.81834 1.49838 1.24308 0.85652 1.09994 0.96349 0.95018 0.80949 0.78124 0.87737 1.20737 1.07746 0.97052 0.99834 1.22856 0.88814 0.90853 0.91612 1.68012 1.16275 1.39862 1.04276 1.19315 0.87233 0.85428 0.86793 1.44013 1.58218 1.11997 1.17449 1.21914 0.92502 0.95691 0.87036 0.86804 1.23910 1.02479 0.95778 0.97411 1.22182 0.90651 0.84027 1.00291 0.87375 1.48447 1.13693 1.05054 1.47246 1.22443 0.87679 1.00204 0.98633 1.21557 1.03640 0.91466 1.13210 1.23980 0.91640 1.00592 0.97742 1.77420 1.23836 0.86067 1.23967 1.23748 0.96972 1.01654 0.96548 1.67894 1.27089 1.08375 1.24813 1.22623 0.89129 0.98891 0.86759 0.76826 0.90567 1.17320 1.17725 0.80984 0.74350 0.86242 0.89918 0.81607 0.83382 0.79816 0.89507 0.86292 0.82498 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.59 12.82 -35.23 -0.45 0.13 16 2 C -0.05 0.07 2.82 36.01 0.10 0.17 16 3 Si 0.68 -1.51 29.92 -169.99 -5.09 -6.60 16 4 C -0.25 -0.42 5.40 -104.35 -0.56 -0.98 16 5 C 0.23 0.50 10.99 -17.22 -0.19 0.31 16 6 N -0.56 -2.23 10.46 -13.93 -0.15 -2.38 16 7 C 0.57 2.12 8.42 -322.80 -2.72 -0.60 16 8 N -0.68 -1.32 4.50 -55.00 -0.25 -1.56 16 9 C 0.14 -0.03 4.26 -67.12 -0.29 -0.31 16 10 H 0.11 0.01 7.50 -51.93 -0.39 -0.38 16 11 C -0.16 0.24 7.27 -25.92 -0.19 0.05 16 12 C 0.13 -0.05 5.13 -67.12 -0.34 -0.40 16 13 H 0.11 -0.12 8.14 -51.93 -0.42 -0.54 16 14 N -0.36 -0.73 3.10 -54.07 -0.17 -0.90 16 15 C 0.06 0.10 8.40 -17.22 -0.14 -0.05 16 16 C -0.27 -0.52 10.80 -40.01 -0.43 -0.95 16 17 C 0.05 0.11 12.03 -17.37 -0.21 -0.10 16 18 N -0.29 -1.15 12.58 30.62 0.39 -0.76 16 19 C -0.15 0.17 7.61 -25.92 -0.20 -0.02 16 20 N -0.56 -2.06 9.20 -13.93 -0.13 -2.19 16 21 C 0.19 0.51 9.92 -17.22 -0.17 0.34 16 22 H 0.38 -2.31 8.74 45.56 0.40 -1.91 16 23 H 0.08 -0.24 7.96 -51.93 -0.41 -0.65 16 24 H -0.25 -0.20 7.06 56.52 0.40 0.20 16 25 H -0.25 -0.07 7.11 56.52 0.40 0.33 16 26 H 0.17 -0.04 8.06 -52.48 -0.42 -0.46 16 27 H 0.42 1.13 6.71 -40.82 -0.27 0.85 16 28 H 0.12 -0.42 8.14 -51.93 -0.42 -0.85 16 29 H 0.08 -0.04 6.33 -51.93 -0.33 -0.37 16 30 H 0.17 0.12 6.69 -52.49 -0.35 -0.23 16 31 H 0.15 0.07 8.06 -52.48 -0.42 -0.35 16 32 H 0.18 -0.05 8.06 -52.49 -0.42 -0.48 16 33 H 0.09 0.06 8.14 -51.93 -0.42 -0.36 16 34 H 0.12 -0.40 8.14 -51.93 -0.42 -0.82 16 35 H 0.16 0.20 5.04 -52.49 -0.26 -0.07 16 LS Contribution 295.51 15.07 4.45 4.45 Total: 0.00 -7.91 295.51 -10.51 -18.43 By element: Atomic # 1 Polarization: -2.31 SS G_CDS: -3.78 Total: -6.09 kcal Atomic # 6 Polarization: 2.80 SS G_CDS: -5.34 Total: -2.54 kcal Atomic # 7 Polarization: -7.48 SS G_CDS: -0.30 Total: -7.79 kcal Atomic # 8 Polarization: 0.59 SS G_CDS: -0.45 Total: 0.13 kcal Atomic # 14 Polarization: -1.51 SS G_CDS: -5.09 Total: -6.60 kcal Total LS contribution 4.45 Total: 4.45 kcal Total: -7.91 -10.51 -18.43 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17567480_12175864.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 175.819 kcal (2) G-P(sol) polarization free energy of solvation -7.915 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 167.904 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.513 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.428 kcal (6) G-S(sol) free energy of system = (1) + (5) 157.391 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds