Wall clock time and date at job start Mon Mar 8 2021 10:08:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86301 * 109.47174 * 2 1 4 4 C 1.50701 * 109.47063 * 119.99927 * 2 1 3 5 5 C 1.38599 * 120.72285 * 65.00164 * 4 2 1 6 6 N 1.32282 * 119.20315 * 179.97438 * 5 4 2 7 7 C 1.32500 * 120.73466 * 359.97438 * 6 5 4 8 8 N 1.38404 * 119.21183 * 180.02562 * 7 6 5 9 9 C 1.46509 * 119.99560 * 180.02562 * 8 7 6 10 10 H 1.09004 * 112.84746 * 331.22826 * 9 8 7 11 11 C 1.53773 * 113.61267 * 102.53224 * 9 8 7 12 12 C 1.53784 * 87.07952 * 89.11798 * 11 9 8 13 13 H 1.09001 * 113.61750 * 139.98375 * 12 11 9 14 14 N 1.46507 * 113.68826 * 270.87003 * 12 11 9 15 15 C 1.34947 * 126.03688 * 349.33285 * 14 12 11 16 16 C 1.35313 * 107.74462 * 179.83986 * 15 14 12 17 17 C 1.39866 * 107.92087 * 0.42473 * 16 15 14 18 18 N 1.30838 * 108.20306 * 359.73729 * 17 16 15 19 19 C 1.53775 * 87.08285 * 25.42864 * 12 11 9 20 20 N 1.32492 * 121.56657 * 0.02562 * 7 6 5 21 21 C 1.32279 * 120.74162 * 359.97438 * 20 7 6 22 22 H 0.96693 * 113.99523 * 59.99806 * 1 2 3 23 23 H 1.08996 * 109.47481 * 239.99823 * 2 1 3 24 24 H 1.48506 * 109.99774 * 59.99934 * 3 2 1 25 25 H 1.48498 * 110.00066 * 181.31725 * 3 2 1 26 26 H 1.08006 * 120.39988 * 0.24847 * 5 4 2 27 27 H 0.96989 * 120.00366 * 359.97438 * 8 7 6 28 28 H 1.08998 * 113.61557 * 203.66221 * 11 9 8 29 29 H 1.08999 * 113.61948 * 334.56625 * 11 9 8 30 30 H 1.08002 * 126.12567 * 359.97438 * 15 14 12 31 31 H 1.08005 * 126.03490 * 180.15686 * 16 15 14 32 32 H 1.07995 * 125.89707 * 179.72048 * 17 16 15 33 33 H 1.08998 * 113.61438 * 220.02182 * 19 12 11 34 34 H 1.09002 * 113.68998 * 89.12823 * 19 12 11 35 35 H 1.07998 * 120.39702 * 179.97438 * 21 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.6927 -2.0633 1.4141 6 7 2.1478 -2.6567 2.5051 7 6 2.8250 -1.9727 3.4157 8 7 3.2872 -2.6254 4.5452 9 6 4.0374 -1.8856 5.5632 10 1 4.5879 -1.0394 5.1518 11 6 3.2054 -1.5350 6.8080 12 6 3.6486 -2.8883 7.3886 13 1 3.8847 -2.8510 8.4521 14 7 2.7565 -3.9978 7.0426 15 6 1.5402 -3.8890 6.4682 16 6 1.0447 -5.1384 6.3121 17 6 1.9863 -6.0411 6.8170 18 7 3.0129 -5.3584 7.2551 19 6 4.8843 -2.7849 6.4792 20 7 3.0702 -0.6787 3.2705 21 6 2.6430 -0.0252 2.2027 22 1 -0.3932 0.4417 -0.7650 23 1 1.7924 -0.5138 -0.8899 24 1 1.5615 2.4679 1.2085 25 1 3.5346 1.7703 -0.0321 26 1 1.1454 -2.6272 0.6731 27 1 3.1139 -3.5723 4.6632 28 1 3.5872 -0.6767 7.3609 29 1 2.1346 -1.4726 6.6142 30 1 1.0510 -2.9696 6.1822 31 1 0.0888 -5.3932 5.8786 32 1 1.8835 -7.1158 6.8412 33 1 5.1688 -3.7315 6.0198 34 1 5.7259 -2.2686 6.9409 35 1 2.8457 1.0296 2.0903 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_17567480_12175864.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:08:19 Heat of formation + Delta-G solvation = 159.239879 kcal Electronic energy + Delta-G solvation = -20984.788435 eV Core-core repulsion = 17795.565050 eV Total energy + Delta-G solvation = -3189.223385 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 274.117 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -42.71132 -42.12783 -40.05744 -37.88635 -35.73111 -34.91890 -32.69062 -31.90758 -30.99473 -27.14433 -26.99321 -26.18037 -25.42400 -23.31423 -22.48326 -21.93056 -20.31981 -19.80105 -18.69277 -18.27267 -18.18937 -17.24783 -16.57854 -16.36908 -16.20519 -15.86511 -15.41228 -15.27480 -15.09639 -14.85565 -14.60003 -14.11585 -13.99891 -13.80349 -13.23648 -13.19255 -12.93071 -12.36764 -12.32544 -12.06554 -11.91181 -11.86982 -11.54389 -11.37914 -10.62261 -10.44754 -10.04468 -9.61682 -9.28455 -4.94611 -0.15689 -0.03910 0.83609 1.31131 1.37323 1.61266 1.66740 1.85107 1.96098 2.58119 2.87968 3.00325 3.20665 3.39331 3.43680 3.48161 3.58180 3.79315 3.86166 3.90402 4.01924 4.08567 4.39899 4.50151 4.51898 4.54866 4.57964 4.62027 4.68922 4.74137 4.80264 4.84243 5.05763 5.12985 5.59016 5.65825 5.78573 6.02513 6.17376 6.66471 6.95805 7.05887 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.565 6.565 2 C -0.055 4.055 3 Si 0.770 3.230 4 C -0.249 4.249 5 C 0.218 3.782 6 N -0.584 5.584 7 C 0.555 3.445 8 N -0.678 5.678 9 C 0.128 3.872 10 H 0.111 0.889 11 C -0.142 4.142 12 C 0.121 3.879 13 H 0.118 0.882 14 N -0.362 5.362 15 C 0.055 3.945 16 C -0.281 4.281 17 C 0.039 3.961 18 N -0.326 5.326 19 C -0.139 4.139 20 N -0.572 5.572 21 C 0.176 3.824 22 H 0.406 0.594 23 H 0.102 0.898 24 H -0.293 1.293 25 H -0.287 1.287 26 H 0.194 0.806 27 H 0.411 0.589 28 H 0.145 0.855 29 H 0.072 0.928 30 H 0.174 0.826 31 H 0.159 0.841 32 H 0.204 0.796 33 H 0.066 0.934 34 H 0.145 0.855 35 H 0.164 0.836 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.897 4.475 -4.259 6.243 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.375 6.375 2 C -0.166 4.166 3 Si 0.676 3.324 4 C -0.257 4.257 5 C 0.050 3.950 6 N -0.306 5.306 7 C 0.198 3.802 8 N -0.315 5.315 9 C 0.022 3.978 10 H 0.129 0.871 11 C -0.181 4.181 12 C 0.019 3.981 13 H 0.136 0.864 14 N -0.145 5.145 15 C -0.091 4.091 16 C -0.311 4.311 17 C -0.146 4.146 18 N -0.147 5.147 19 C -0.178 4.178 20 N -0.295 5.295 21 C 0.009 3.991 22 H 0.257 0.743 23 H 0.119 0.881 24 H -0.221 1.221 25 H -0.214 1.214 26 H 0.211 0.789 27 H 0.250 0.750 28 H 0.163 0.837 29 H 0.091 0.909 30 H 0.191 0.809 31 H 0.177 0.823 32 H 0.220 0.780 33 H 0.085 0.915 34 H 0.163 0.837 35 H 0.181 0.819 Dipole moment (debyes) X Y Z Total from point charges 1.370 4.416 -1.733 4.938 hybrid contribution -1.215 -0.583 -0.740 1.537 sum 0.156 3.833 -2.473 4.564 Atomic orbital electron populations 1.86438 1.17079 1.82431 1.51579 1.24434 0.85915 1.10473 0.95814 0.94075 0.77508 0.75604 0.85183 1.21083 1.06992 0.97072 1.00567 1.23291 0.88681 0.91408 0.91574 1.68037 1.16948 1.40526 1.05052 1.19524 0.87693 0.85657 0.87328 1.44106 1.58151 1.11741 1.17460 1.22072 0.92966 0.95712 0.87082 0.87106 1.23908 1.01716 0.95988 0.96529 1.22441 0.90812 0.83879 1.00968 0.86440 1.48625 1.13966 1.04968 1.46896 1.22606 0.87726 1.00498 0.98301 1.21792 1.04202 0.91570 1.13518 1.24375 0.91329 1.01666 0.97269 1.77350 1.24894 0.87154 1.25313 1.23761 0.97392 1.00686 0.95913 1.67881 1.27664 1.08464 1.25463 1.22902 0.89683 0.99367 0.87109 0.74274 0.88062 1.22066 1.21443 0.78925 0.74989 0.83704 0.90906 0.80936 0.82324 0.77951 0.91492 0.83668 0.81915 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 1.92 12.82 -148.98 -1.91 0.01 16 2 C -0.05 0.20 2.82 71.24 0.20 0.40 16 3 Si 0.77 -3.62 29.92 68.60 2.05 -1.57 16 4 C -0.25 -0.88 5.40 -19.69 -0.11 -0.99 16 5 C 0.22 1.03 10.99 84.71 0.93 1.96 16 6 N -0.58 -5.23 10.46 -197.98 -2.07 -7.30 16 7 C 0.55 4.82 8.42 261.49 2.20 7.02 16 8 N -0.68 -3.47 4.50 -327.92 -1.48 -4.94 16 9 C 0.13 0.02 4.26 45.51 0.19 0.21 16 10 H 0.11 0.09 7.50 -2.39 -0.02 0.07 16 11 C -0.14 0.46 7.27 31.12 0.23 0.68 16 12 C 0.12 -0.08 5.13 45.52 0.23 0.15 16 13 H 0.12 -0.30 8.14 -2.39 -0.02 -0.32 16 14 N -0.36 -1.75 3.10 -324.98 -1.01 -2.76 16 15 C 0.05 0.24 8.40 83.54 0.70 0.94 16 16 C -0.28 -1.33 10.80 21.99 0.24 -1.09 16 17 C 0.04 0.22 12.03 85.24 1.02 1.25 16 18 N -0.33 -2.90 12.58 -57.03 -0.72 -3.61 16 19 C -0.14 0.30 7.61 31.12 0.24 0.53 16 20 N -0.57 -4.88 9.20 -197.98 -1.82 -6.70 16 21 C 0.18 1.09 9.92 84.71 0.84 1.93 16 22 H 0.41 -5.61 8.74 -74.06 -0.65 -6.26 16 23 H 0.10 -0.84 7.96 -2.39 -0.02 -0.86 16 24 H -0.29 -0.76 7.06 99.48 0.70 -0.06 16 25 H -0.29 -0.28 7.11 99.48 0.71 0.43 16 26 H 0.19 -0.16 8.06 -2.91 -0.02 -0.18 16 27 H 0.41 2.87 6.71 -92.72 -0.62 2.25 16 28 H 0.15 -1.22 8.14 -2.39 -0.02 -1.24 16 29 H 0.07 -0.05 6.33 -2.39 -0.02 -0.06 16 30 H 0.17 0.41 6.69 -2.91 -0.02 0.40 16 31 H 0.16 0.25 8.06 -2.91 -0.02 0.23 16 32 H 0.20 -0.01 8.06 -2.91 -0.02 -0.03 16 33 H 0.07 0.17 8.14 -2.39 -0.02 0.15 16 34 H 0.15 -1.12 8.14 -2.39 -0.02 -1.14 16 35 H 0.16 0.60 5.04 -2.91 -0.01 0.58 16 Total: 0.00 -19.81 295.51 -0.12 -19.93 By element: Atomic # 1 Polarization: -5.96 SS G_CDS: -0.09 Total: -6.05 kcal Atomic # 6 Polarization: 6.08 SS G_CDS: 6.92 Total: 13.00 kcal Atomic # 7 Polarization: -18.22 SS G_CDS: -7.09 Total: -25.31 kcal Atomic # 8 Polarization: 1.92 SS G_CDS: -1.91 Total: 0.01 kcal Atomic # 14 Polarization: -3.62 SS G_CDS: 2.05 Total: -1.57 kcal Total: -19.81 -0.12 -19.93 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17567480_12175864.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 179.172 kcal (2) G-P(sol) polarization free energy of solvation -19.812 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 159.360 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.120 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.932 kcal (6) G-S(sol) free energy of system = (1) + (5) 159.240 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds