Wall clock time and date at job start Mon Mar 8 2021 10:08:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86297 * 109.47074 * 2 1 4 4 C 1.50697 * 109.47592 * 120.00559 * 2 1 3 5 5 C 1.38020 * 120.33290 * 245.00169 * 4 2 1 6 6 N 1.31981 * 120.85185 * 179.97438 * 5 4 2 7 7 C 1.32393 * 121.62637 * 359.97438 * 6 5 4 8 8 N 1.38996 * 119.70589 * 179.97438 * 7 6 5 9 9 C 1.46501 * 119.99980 * 179.97438 * 8 7 6 10 10 H 1.08998 * 112.84866 * 23.80860 * 9 8 7 11 11 C 1.53787 * 113.61128 * 155.00110 * 9 8 7 12 12 C 1.53784 * 87.07923 * 139.98386 * 11 9 8 13 13 H 1.09002 * 113.61478 * 89.11632 * 12 11 9 14 14 N 1.46497 * 113.61569 * 220.01663 * 12 11 9 15 15 C 1.34947 * 126.03630 * 84.99604 * 14 12 11 16 16 C 1.35319 * 107.74522 * 179.97438 * 15 14 12 17 17 C 1.39864 * 107.92381 * 0.02562 * 16 15 14 18 18 N 1.30840 * 108.19729 * 359.74017 * 17 16 15 19 19 C 1.53779 * 87.08045 * 334.56667 * 12 11 9 20 20 C 1.39139 * 120.58433 * 0.27086 * 7 6 5 21 21 C 1.38293 * 119.10099 * 359.48493 * 20 7 6 22 22 H 0.96698 * 113.99420 * 299.99453 * 1 2 3 23 23 H 1.09005 * 109.46683 * 240.00521 * 2 1 3 24 24 H 1.48511 * 109.99863 * 178.68321 * 3 2 1 25 25 H 1.48498 * 110.00325 * 299.99967 * 3 2 1 26 26 H 1.07998 * 119.57739 * 359.97126 * 5 4 2 27 27 H 0.97005 * 119.99891 * 0.02562 * 8 7 6 28 28 H 1.09004 * 113.61202 * 254.53139 * 11 9 8 29 29 H 1.08994 * 113.61447 * 25.43570 * 11 9 8 30 30 H 1.08004 * 126.12748 * 0.02562 * 15 14 12 31 31 H 1.08004 * 126.03836 * 180.02562 * 16 15 14 32 32 H 1.07992 * 125.90208 * 179.97438 * 17 16 15 33 33 H 1.09006 * 113.61307 * 270.88660 * 19 12 11 34 34 H 1.08999 * 113.69146 * 139.99146 * 19 12 11 35 35 H 1.07997 * 120.44742 * 179.70248 * 20 7 6 36 36 H 1.08003 * 120.75118 * 180.26145 * 21 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9315 -0.7105 1.2303 5 6 2.6385 -0.0202 2.1940 6 7 3.0828 -0.6321 3.2757 7 6 2.8702 -1.9228 3.4800 8 7 3.3568 -2.5269 4.6333 9 6 3.1248 -3.9546 4.8662 10 1 2.9484 -4.5104 3.9453 11 6 4.1688 -4.6059 5.7886 12 6 3.0058 -5.3872 6.4225 13 1 2.7958 -6.3356 5.9278 14 7 3.1086 -5.5141 7.8784 15 6 2.6891 -4.6077 8.7859 16 6 2.9637 -5.0988 10.0166 17 6 3.5723 -6.3477 9.8557 18 7 3.6549 -6.6000 8.5745 19 6 2.0898 -4.2389 5.9674 20 6 2.1693 -2.6811 2.5474 21 6 1.6868 -2.0663 1.4066 22 1 -0.3932 0.4416 0.7651 23 1 1.7923 -0.5138 -0.8901 24 1 3.5347 1.7702 0.0321 25 1 1.5615 2.4679 -1.2085 26 1 2.8306 1.0342 2.0612 27 1 3.8494 -2.0031 5.2844 28 1 4.8834 -5.2380 5.2614 29 1 4.6466 -3.9036 6.4716 30 1 2.2178 -3.6605 8.5688 31 1 2.7505 -4.6122 10.9569 32 1 3.9117 -6.9940 10.6516 33 1 1.9993 -3.4363 6.6994 34 1 1.1256 -4.5733 5.5845 35 1 2.0012 -3.7348 2.7141 36 1 1.1356 -2.6285 0.6673 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_17567480_13915762.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:08:22 Heat of formation + Delta-G solvation = 131.586487 kcal Electronic energy + Delta-G solvation = -19939.397840 eV Core-core repulsion = 16814.401225 eV Total energy + Delta-G solvation = -3124.996615 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 273.122 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -42.36828 -41.49117 -40.10132 -37.93112 -35.69161 -33.49874 -32.41413 -31.14470 -30.87057 -27.20923 -26.89336 -25.41462 -24.84057 -22.96061 -22.18888 -21.77536 -20.52698 -19.12360 -18.59131 -18.37949 -17.32557 -17.01585 -16.55171 -16.15074 -15.92486 -15.75911 -15.50225 -15.22188 -14.99605 -14.38640 -14.21162 -14.12166 -14.10668 -13.77551 -13.48651 -13.42003 -12.78112 -12.58062 -12.30668 -12.23400 -12.01519 -11.56756 -11.25909 -10.80984 -10.46590 -10.43343 -10.35247 -9.53266 -8.83055 -5.06246 0.16209 0.34950 0.93308 1.27695 1.40361 1.61328 1.95555 1.96282 2.01326 2.73468 2.88499 3.12633 3.31215 3.39390 3.47320 3.55362 3.71740 3.79937 3.86220 3.93781 4.00570 4.15742 4.23682 4.25344 4.29847 4.46807 4.47601 4.57988 4.66011 4.68701 4.74252 4.89197 4.94414 5.11034 5.23719 5.41885 5.73312 5.86215 6.05110 6.38786 6.55598 6.78459 7.06258 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.053 4.053 3 Si 0.680 3.320 4 C -0.233 4.233 5 C 0.158 3.842 6 N -0.538 5.538 7 C 0.407 3.593 8 N -0.710 5.710 9 C 0.138 3.862 10 H 0.120 0.880 11 C -0.153 4.153 12 C 0.141 3.859 13 H 0.127 0.873 14 N -0.363 5.363 15 C 0.052 3.948 16 C -0.272 4.272 17 C 0.045 3.955 18 N -0.296 5.296 19 C -0.162 4.162 20 C -0.239 4.239 21 C -0.005 4.005 22 H 0.378 0.622 23 H 0.112 0.888 24 H -0.256 1.256 25 H -0.253 1.253 26 H 0.156 0.844 27 H 0.408 0.592 28 H 0.091 0.909 29 H 0.096 0.904 30 H 0.171 0.829 31 H 0.148 0.852 32 H 0.184 0.816 33 H 0.100 0.900 34 H 0.091 0.909 35 H 0.134 0.866 36 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.705 1.066 1.392 2.445 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.165 4.165 3 Si 0.582 3.418 4 C -0.238 4.238 5 C 0.000 4.000 6 N -0.255 5.255 7 C 0.172 3.828 8 N -0.342 5.342 9 C 0.031 3.969 10 H 0.137 0.863 11 C -0.192 4.192 12 C 0.038 3.962 13 H 0.145 0.855 14 N -0.145 5.145 15 C -0.094 4.094 16 C -0.302 4.302 17 C -0.141 4.141 18 N -0.117 5.117 19 C -0.202 4.202 20 C -0.263 4.263 21 C -0.031 4.031 22 H 0.226 0.774 23 H 0.130 0.870 24 H -0.181 1.181 25 H -0.178 1.178 26 H 0.172 0.828 27 H 0.245 0.755 28 H 0.109 0.891 29 H 0.115 0.885 30 H 0.188 0.812 31 H 0.166 0.834 32 H 0.201 0.799 33 H 0.118 0.882 34 H 0.110 0.890 35 H 0.152 0.848 36 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -0.330 0.804 0.006 0.869 hybrid contribution -0.419 -0.310 0.234 0.572 sum -0.749 0.494 0.240 0.929 Atomic orbital electron populations 1.86500 1.17293 1.81677 1.49258 1.24791 0.85044 1.09705 0.96918 0.94918 0.81201 0.78059 0.87633 1.21016 1.06703 0.96110 1.00011 1.22204 0.91377 0.98754 0.87646 1.67133 1.25573 1.09034 1.23719 1.18391 0.89261 0.88513 0.86632 1.44382 1.60449 1.08313 1.21019 1.22221 0.95668 0.81361 0.97644 0.86253 1.23893 0.97444 0.99474 0.98428 1.22571 0.97858 0.99914 0.75883 0.85496 1.48615 1.46464 1.13868 1.05556 1.22475 1.00783 0.96598 0.89495 1.21572 1.11940 0.98668 0.97989 1.23965 0.99058 0.96954 0.94096 1.77397 1.20091 1.08248 1.05951 1.24073 0.99400 0.97542 0.99174 1.21477 1.06760 1.01237 0.96838 1.21210 0.93027 0.93441 0.95392 0.77426 0.87049 1.18058 1.17765 0.82757 0.75544 0.89054 0.88534 0.81150 0.83389 0.79916 0.88209 0.89032 0.84828 0.84592 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.12 12.84 -35.23 -0.45 -0.33 16 2 C -0.05 0.03 2.82 36.00 0.10 0.14 16 3 Si 0.68 -0.89 29.83 -169.99 -5.07 -5.96 16 4 C -0.23 0.02 5.36 -104.46 -0.56 -0.54 16 5 C 0.16 0.06 9.84 -17.57 -0.17 -0.11 16 6 N -0.54 -0.96 10.39 -12.44 -0.13 -1.09 16 7 C 0.41 0.19 7.65 -155.03 -1.19 -1.00 16 8 N -0.71 1.20 5.53 -53.14 -0.29 0.90 16 9 C 0.14 -0.49 4.04 -67.12 -0.27 -0.76 16 10 H 0.12 -0.53 6.09 -51.93 -0.32 -0.85 16 11 C -0.15 0.43 7.63 -25.91 -0.20 0.23 16 12 C 0.14 -0.28 5.04 -67.12 -0.34 -0.62 16 13 H 0.13 -0.32 8.14 -51.93 -0.42 -0.75 16 14 N -0.36 -0.35 3.81 -54.07 -0.21 -0.55 16 15 C 0.05 0.00 10.69 -17.22 -0.18 -0.18 16 16 C -0.27 -0.20 10.80 -40.01 -0.43 -0.63 16 17 C 0.05 0.08 12.03 -17.37 -0.21 -0.13 16 18 N -0.30 -1.03 12.58 30.62 0.39 -0.64 16 19 C -0.16 0.59 7.23 -25.92 -0.19 0.40 16 20 C -0.24 0.13 9.29 -39.23 -0.36 -0.24 16 21 C 0.00 0.00 9.83 -39.32 -0.39 -0.39 16 22 H 0.38 -1.49 8.70 45.56 0.40 -1.09 16 23 H 0.11 -0.03 7.96 -51.93 -0.41 -0.45 16 24 H -0.26 -0.30 7.11 56.52 0.40 0.10 16 25 H -0.25 -0.50 7.11 56.52 0.40 -0.09 16 26 H 0.16 -0.26 4.91 -52.49 -0.26 -0.52 16 27 H 0.41 -0.76 8.85 -40.82 -0.36 -1.12 16 28 H 0.09 -0.26 8.14 -51.93 -0.42 -0.68 16 29 H 0.10 -0.20 8.12 -51.93 -0.42 -0.62 16 30 H 0.17 -0.50 6.69 -52.48 -0.35 -0.85 16 31 H 0.15 -0.17 8.06 -52.48 -0.42 -0.59 16 32 H 0.18 -0.17 8.06 -52.49 -0.42 -0.59 16 33 H 0.10 -0.36 6.32 -51.93 -0.33 -0.68 16 34 H 0.09 -0.38 8.14 -51.93 -0.42 -0.80 16 35 H 0.13 -0.35 6.03 -52.49 -0.32 -0.67 16 36 H 0.14 -0.17 8.06 -52.48 -0.42 -0.60 16 LS Contribution 303.68 15.07 4.58 4.58 Total: 0.00 -8.08 303.68 -9.68 -17.76 By element: Atomic # 1 Polarization: -6.74 SS G_CDS: -4.10 Total: -10.85 kcal Atomic # 6 Polarization: 0.57 SS G_CDS: -4.39 Total: -3.82 kcal Atomic # 7 Polarization: -1.14 SS G_CDS: -0.24 Total: -1.38 kcal Atomic # 8 Polarization: 0.12 SS G_CDS: -0.45 Total: -0.33 kcal Atomic # 14 Polarization: -0.89 SS G_CDS: -5.07 Total: -5.96 kcal Total LS contribution 4.58 Total: 4.58 kcal Total: -8.08 -9.68 -17.76 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17567480_13915762.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 149.348 kcal (2) G-P(sol) polarization free energy of solvation -8.081 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 141.268 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.681 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.762 kcal (6) G-S(sol) free energy of system = (1) + (5) 131.586 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds