Wall clock time and date at job start Mon Mar 8 2021 10:08:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86304 * 109.46867 * 2 1 4 4 C 1.50691 * 109.47319 * 240.00011 * 2 1 3 5 5 C 1.33326 * 125.95354 * 299.99522 * 4 2 1 6 6 N 1.32117 * 114.58375 * 180.02562 * 5 4 2 7 7 C 1.29686 * 116.86341 * 359.97438 * 6 5 4 8 8 N 1.38611 * 124.94846 * 179.97438 * 7 6 5 9 9 C 1.46510 * 119.99978 * 0.02562 * 8 7 6 10 10 H 1.09001 * 112.84651 * 26.65644 * 9 8 7 11 11 C 1.53785 * 113.61231 * 157.84927 * 9 8 7 12 12 C 1.53783 * 87.07753 * 89.20367 * 11 9 8 13 13 H 1.08998 * 113.60951 * 140.06810 * 12 11 9 14 14 N 1.46504 * 113.61157 * 270.88114 * 12 11 9 15 15 C 1.34943 * 126.03599 * 154.76554 * 14 12 11 16 16 C 1.35315 * 107.74928 * 180.24673 * 15 14 12 17 17 C 1.39869 * 107.91660 * 359.63789 * 16 15 14 18 18 N 1.30841 * 108.20276 * 0.36571 * 17 16 15 19 19 C 1.53773 * 87.08410 * 25.43080 * 12 11 9 20 20 S 1.70962 * 110.10172 * 0.24433 * 7 6 5 21 21 H 0.96703 * 114.00010 * 60.00311 * 1 2 3 22 22 H 1.09002 * 109.46951 * 119.99412 * 2 1 3 23 23 H 1.48499 * 109.99925 * 298.68067 * 3 2 1 24 24 H 1.48501 * 109.99869 * 59.99691 * 3 2 1 25 25 H 1.08002 * 122.70913 * 359.97438 * 5 4 2 26 26 H 0.97000 * 120.00080 * 180.02562 * 8 7 6 27 27 H 1.08997 * 113.61396 * 334.65258 * 11 9 8 28 28 H 1.09001 * 113.68789 * 203.76171 * 11 9 8 29 29 H 1.08005 * 126.12857 * 359.97438 * 15 14 12 30 30 H 1.07998 * 126.04667 * 179.76797 * 16 15 14 31 31 H 1.08008 * 125.90166 * 180.14484 * 17 16 15 32 32 H 1.09003 * 113.61477 * 89.11590 * 19 12 11 33 33 H 1.08998 * 113.61791 * 220.02147 * 19 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 1.6836 -1.9788 -1.5579 6 7 2.2386 -2.3725 -2.6904 7 6 2.9431 -1.4943 -3.3341 8 7 3.5972 -1.7259 -4.5340 9 6 3.5200 -3.0446 -5.1677 10 1 2.6134 -3.5889 -4.9032 11 6 3.8048 -3.0195 -6.6787 12 6 5.2873 -3.2207 -6.3229 13 1 5.8078 -3.9059 -6.9920 14 7 6.0158 -1.9670 -6.1133 15 6 7.1245 -1.8094 -5.3604 16 6 7.4824 -0.5058 -5.4210 17 6 6.5657 0.1542 -6.2457 18 7 5.6843 -0.7201 -6.6589 19 6 4.8041 -3.8776 -5.0192 20 16 2.9536 -0.0114 -2.4833 21 1 -0.3933 0.4417 -0.7651 22 1 1.7923 -0.5138 0.8901 23 1 1.5878 2.4586 -1.2242 24 1 1.5613 2.4679 1.2085 25 1 1.0788 -2.6320 -0.9464 26 1 4.1061 -1.0150 -4.9541 27 1 3.5946 -2.0578 -7.1467 28 1 3.3681 -3.8584 -7.2207 29 1 7.6324 -2.5839 -4.8049 30 1 8.3278 -0.0551 -4.9225 31 1 6.5804 1.2050 -6.4953 32 1 4.6403 -4.9517 -5.1062 33 1 5.4006 -3.6087 -4.1475 There are 47 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 47 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_17567480_15704118.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:08:24 Heat of formation + Delta-G solvation = 143.597079 kcal Electronic energy + Delta-G solvation = -19374.917697 eV Core-core repulsion = 16339.594147 eV Total energy + Delta-G solvation = -3035.323550 eV No. of doubly occupied orbitals = 47 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 279.078 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -42.52566 -40.79619 -39.83903 -37.93717 -35.30655 -32.36753 -31.11934 -30.95048 -27.12365 -26.87315 -25.97985 -24.42885 -22.73663 -21.86684 -21.02513 -20.25970 -19.63234 -18.26803 -18.10923 -17.43867 -16.57656 -16.46616 -16.28409 -15.83210 -15.57139 -15.30968 -15.07694 -14.85640 -14.64619 -13.90297 -13.85041 -13.82584 -13.36623 -13.11361 -12.84143 -12.34025 -12.22181 -11.98454 -11.90592 -11.57692 -11.18838 -10.89481 -10.40042 -10.23805 -10.16000 -9.59379 -8.72974 -5.04187 -0.01211 0.05413 0.72833 0.87102 1.26782 1.37278 1.57945 1.85172 1.92131 2.04074 2.13399 2.91997 3.11528 3.35468 3.49939 3.61611 3.81675 3.86220 3.95510 4.02115 4.36594 4.40703 4.51415 4.54347 4.56726 4.63464 4.72594 4.76777 4.79691 4.81525 5.05584 5.17169 5.64783 5.85306 6.01546 6.08570 6.37018 6.68581 7.02489 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.526 6.526 2 C -0.016 4.016 3 Si 0.652 3.348 4 C -0.306 4.306 5 C 0.119 3.881 6 N -0.550 5.550 7 C 0.326 3.674 8 N -0.674 5.674 9 C 0.138 3.862 10 H 0.111 0.889 11 C -0.145 4.145 12 C 0.126 3.874 13 H 0.106 0.894 14 N -0.360 5.360 15 C 0.061 3.939 16 C -0.272 4.272 17 C 0.047 3.953 18 N -0.304 5.304 19 C -0.158 4.158 20 S 0.091 5.909 21 H 0.377 0.623 22 H 0.125 0.875 23 H -0.244 1.244 24 H -0.237 1.237 25 H 0.176 0.824 26 H 0.418 0.582 27 H 0.096 0.904 28 H 0.117 0.883 29 H 0.172 0.828 30 H 0.150 0.850 31 H 0.185 0.815 32 H 0.116 0.884 33 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.753 -1.139 -0.839 4.011 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.332 6.332 2 C -0.129 4.129 3 Si 0.552 3.448 4 C -0.429 4.429 5 C -0.033 4.033 6 N -0.275 5.275 7 C -0.044 4.044 8 N -0.314 5.314 9 C 0.029 3.971 10 H 0.129 0.871 11 C -0.183 4.183 12 C 0.024 3.976 13 H 0.124 0.876 14 N -0.143 5.143 15 C -0.085 4.085 16 C -0.301 4.301 17 C -0.139 4.139 18 N -0.126 5.126 19 C -0.199 4.199 20 S 0.340 5.660 21 H 0.225 0.775 22 H 0.143 0.857 23 H -0.168 1.168 24 H -0.160 1.160 25 H 0.193 0.807 26 H 0.258 0.742 27 H 0.115 0.885 28 H 0.135 0.865 29 H 0.189 0.811 30 H 0.167 0.833 31 H 0.202 0.798 32 H 0.134 0.866 33 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges 2.893 -0.622 -1.481 3.309 hybrid contribution -0.333 -0.409 0.217 0.570 sum 2.560 -1.031 -1.264 3.035 Atomic orbital electron populations 1.86611 1.17495 1.79917 1.49225 1.24060 0.83455 1.09758 0.95664 0.95208 0.91714 0.75329 0.82583 1.25527 1.13272 0.99311 1.04789 1.21325 0.97142 0.93048 0.91751 1.66496 1.17141 1.33474 1.10421 1.23733 0.94923 0.93516 0.92218 1.43907 1.54181 1.13955 1.19394 1.21897 0.99268 0.83569 0.92341 0.87082 1.23564 0.92798 1.05528 0.96421 1.22276 0.93745 0.82204 0.99395 0.87592 1.48460 1.21245 1.07134 1.37412 1.22514 0.90160 0.98912 0.96887 1.21583 1.05851 0.93297 1.09419 1.24004 0.93286 0.99817 0.96758 1.77326 1.24501 0.88962 1.21821 1.23971 0.98027 1.01110 0.96745 1.84056 1.50986 1.13769 1.17148 0.77538 0.85723 1.16756 1.16012 0.80677 0.74197 0.88540 0.86466 0.81079 0.83276 0.79781 0.86608 0.89959 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.78 12.87 -35.23 -0.45 -1.23 16 2 C -0.02 -0.01 2.99 36.00 0.11 0.10 16 3 Si 0.65 -0.07 31.05 -169.99 -5.28 -5.35 16 4 C -0.31 -0.41 5.74 -36.03 -0.21 -0.61 16 5 C 0.12 0.27 11.22 -19.14 -0.21 0.06 16 6 N -0.55 -1.87 9.87 -15.21 -0.15 -2.02 16 7 C 0.33 0.80 8.09 -87.68 -0.71 0.09 16 8 N -0.67 -0.79 5.27 -54.98 -0.29 -1.08 16 9 C 0.14 -0.07 4.41 -67.11 -0.30 -0.37 16 10 H 0.11 0.03 7.73 -51.93 -0.40 -0.37 16 11 C -0.14 0.26 7.44 -25.92 -0.19 0.07 16 12 C 0.13 -0.23 4.90 -67.12 -0.33 -0.56 16 13 H 0.11 -0.32 8.14 -51.93 -0.42 -0.75 16 14 N -0.36 -0.02 2.79 -54.07 -0.15 -0.18 16 15 C 0.06 -0.04 11.00 -17.23 -0.19 -0.23 16 16 C -0.27 0.10 10.80 -40.01 -0.43 -0.33 16 17 C 0.05 0.01 12.03 -17.36 -0.21 -0.20 16 18 N -0.30 -0.49 10.34 30.63 0.32 -0.17 16 19 C -0.16 0.35 7.54 -25.92 -0.20 0.16 16 20 S 0.09 0.11 20.57 -107.50 -2.21 -2.10 16 21 H 0.38 -0.39 8.70 45.56 0.40 0.01 16 22 H 0.13 -0.09 7.96 -51.93 -0.41 -0.51 16 23 H -0.24 -0.47 7.11 56.52 0.40 -0.06 16 24 H -0.24 -0.56 7.11 56.52 0.40 -0.16 16 25 H 0.18 0.18 8.06 -52.49 -0.42 -0.24 16 26 H 0.42 0.58 6.55 -40.82 -0.27 0.31 16 27 H 0.10 0.01 7.51 -51.93 -0.39 -0.38 16 28 H 0.12 -0.46 8.14 -51.93 -0.42 -0.88 16 29 H 0.17 -0.52 8.06 -52.48 -0.42 -0.95 16 30 H 0.15 -0.30 8.06 -52.49 -0.42 -0.72 16 31 H 0.19 -0.41 8.06 -52.48 -0.42 -0.83 16 32 H 0.12 -0.47 8.14 -51.93 -0.42 -0.89 16 33 H 0.08 -0.09 7.81 -51.93 -0.41 -0.49 16 LS Contribution 296.05 15.07 4.46 4.46 Total: 0.00 -6.13 296.05 -10.26 -16.39 By element: Atomic # 1 Polarization: -3.27 SS G_CDS: -3.64 Total: -6.91 kcal Atomic # 6 Polarization: 1.06 SS G_CDS: -2.87 Total: -1.80 kcal Atomic # 7 Polarization: -3.17 SS G_CDS: -0.27 Total: -3.45 kcal Atomic # 8 Polarization: -0.78 SS G_CDS: -0.45 Total: -1.23 kcal Atomic # 14 Polarization: -0.07 SS G_CDS: -5.28 Total: -5.35 kcal Atomic # 16 Polarization: 0.11 SS G_CDS: -2.21 Total: -2.10 kcal Total LS contribution 4.46 Total: 4.46 kcal Total: -6.13 -10.26 -16.39 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17567480_15704118.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 159.985 kcal (2) G-P(sol) polarization free energy of solvation -6.127 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 153.858 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.261 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.388 kcal (6) G-S(sol) free energy of system = (1) + (5) 143.597 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds