Wall clock time and date at job start Mon Mar 8 2021 05:57:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86300 * 109.46933 * 2 1 4 4 C 1.50701 * 109.46804 * 240.00042 * 2 1 3 5 5 C 1.38604 * 120.72067 * 299.99661 * 4 2 1 6 6 N 1.32269 * 119.19680 * 179.97438 * 5 4 2 7 7 C 1.32492 * 120.74318 * 359.97438 * 6 5 4 8 8 N 1.38407 * 119.22295 * 180.02562 * 7 6 5 9 9 C 1.46498 * 120.00426 * 180.02562 * 8 7 6 10 10 C 1.53005 * 109.47181 * 179.97438 * 9 8 7 11 11 H 1.09000 * 112.84812 * 316.19328 * 10 9 8 12 12 C 1.53779 * 113.69141 * 87.46307 * 10 9 8 13 13 C 1.53779 * 87.07914 * 139.99219 * 12 10 9 14 14 H 1.08998 * 113.69152 * 89.12599 * 13 12 10 15 15 N 1.46501 * 113.61341 * 220.01860 * 13 12 10 16 16 C 1.34953 * 126.03725 * 12.50029 * 15 13 12 17 17 C 1.35312 * 107.74266 * 180.20624 * 16 15 13 18 18 C 1.39863 * 107.92527 * 359.64076 * 17 16 15 19 19 N 1.30837 * 108.19940 * 0.36269 * 18 17 16 20 20 C 1.53778 * 113.61216 * 185.00011 * 10 9 8 21 21 N 1.32495 * 121.56593 * 0.27454 * 7 6 5 22 22 C 1.32281 * 120.73735 * 359.45026 * 21 7 6 23 23 H 0.96702 * 113.99595 * 60.00062 * 1 2 3 24 24 H 1.08994 * 109.47084 * 119.99543 * 2 1 3 25 25 H 1.48496 * 110.00352 * 59.99895 * 3 2 1 26 26 H 1.48505 * 109.99756 * 181.32076 * 3 2 1 27 27 H 1.08002 * 120.40107 * 359.96080 * 5 4 2 28 28 H 0.97008 * 119.99400 * 359.97438 * 8 7 6 29 29 H 1.09003 * 109.47051 * 59.99572 * 9 8 7 30 30 H 1.08998 * 109.46959 * 299.99541 * 9 8 7 31 31 H 1.08998 * 113.61284 * 25.44528 * 12 10 9 32 32 H 1.08997 * 113.61146 * 254.54079 * 12 10 9 33 33 H 1.08002 * 126.12372 * 359.93597 * 16 15 13 34 34 H 1.08008 * 126.03698 * 179.76435 * 17 16 15 35 35 H 1.08001 * 125.90034 * 180.14354 * 18 17 16 36 36 H 1.08998 * 113.61314 * 105.38389 * 20 10 9 37 37 H 1.08997 * 113.69185 * 334.49290 * 20 10 9 38 38 H 1.08002 * 120.40182 * 180.25056 * 22 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.6057 -2.0372 -1.4646 6 7 2.0625 -2.6310 -2.5547 7 6 2.8223 -1.9720 -3.4171 8 7 3.2827 -2.6241 -4.5478 9 6 4.1244 -1.9119 -5.5125 10 6 4.4936 -2.8539 -6.6603 11 1 4.7837 -3.8467 -6.3164 12 6 3.4609 -2.8740 -7.7996 13 6 4.6514 -2.9212 -8.7719 14 1 4.9855 -3.9319 -9.0064 15 7 4.4676 -2.0916 -9.9653 16 6 3.5082 -1.1595 -10.1443 17 6 3.6788 -0.6230 -11.3747 18 6 4.7851 -1.2427 -11.9648 19 7 5.2569 -2.1253 -11.1221 20 6 5.4781 -2.2393 -7.6691 21 7 3.1558 -0.7048 -3.2205 22 6 2.7277 -0.0508 -2.1534 23 1 -0.3933 0.4417 -0.7651 24 1 1.7924 -0.5137 0.8900 25 1 1.5615 2.4680 1.2084 26 1 3.5346 1.7703 -0.0322 27 1 0.9866 -2.5796 -0.7654 28 1 3.0487 -3.5529 -4.7010 29 1 5.0331 -1.5687 -5.0180 30 1 3.5792 -1.0544 -5.9068 31 1 2.8736 -1.9587 -7.8726 32 1 2.8472 -3.7746 -7.8167 33 1 2.7391 -0.8930 -9.4344 34 1 3.0696 0.1490 -11.8214 35 1 5.1795 -1.0318 -12.9479 36 1 6.4928 -2.6276 -7.5808 37 1 5.4434 -1.1506 -7.7073 38 1 2.9996 0.9832 -2.0006 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_17567482_12175864.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:57:45 Heat of formation + Delta-G solvation = 144.006489 kcal Electronic energy + Delta-G solvation = -21620.098225 eV Core-core repulsion = 18274.676652 eV Total energy + Delta-G solvation = -3345.421573 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 288.133 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -42.29198 -42.06239 -40.06990 -38.10846 -36.55622 -34.74377 -33.14660 -32.10010 -30.96684 -28.80610 -26.91503 -26.28016 -25.86769 -24.31102 -23.05473 -22.12636 -21.65002 -20.30769 -19.35972 -18.72125 -18.30848 -17.91160 -16.93786 -16.60630 -16.13353 -16.06682 -15.88679 -15.65470 -15.38058 -15.22925 -14.84064 -14.56360 -14.42142 -14.05915 -13.86045 -13.39901 -13.28602 -13.13748 -12.95138 -12.31077 -12.23008 -11.91774 -11.81661 -11.77643 -11.73404 -11.49193 -11.24300 -10.54636 -10.36370 -10.04424 -9.50815 -9.09912 -4.98898 0.04967 0.13166 0.95916 1.32896 1.59131 1.64088 1.83306 1.93802 1.99447 2.79810 3.14188 3.17052 3.32552 3.53333 3.56430 3.64951 3.68273 3.73042 3.84679 3.89338 4.04980 4.16931 4.26265 4.32247 4.50634 4.56454 4.59533 4.70773 4.71335 4.75259 4.77515 4.86696 4.91020 4.97604 5.14831 5.19171 5.30831 5.74366 5.75532 6.03147 6.16432 6.39448 6.77530 6.79424 7.26730 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.554 6.554 2 C -0.047 4.047 3 Si 0.768 3.232 4 C -0.287 4.287 5 C 0.213 3.787 6 N -0.590 5.590 7 C 0.550 3.450 8 N -0.690 5.690 9 C 0.156 3.844 10 C -0.104 4.104 11 H 0.119 0.881 12 C -0.128 4.128 13 C 0.124 3.876 14 H 0.121 0.879 15 N -0.367 5.367 16 C 0.053 3.947 17 C -0.290 4.290 18 C 0.031 3.969 19 N -0.344 5.344 20 C -0.131 4.131 21 N -0.578 5.578 22 C 0.194 3.806 23 H 0.395 0.605 24 H 0.113 0.887 25 H -0.297 1.297 26 H -0.283 1.283 27 H 0.181 0.819 28 H 0.420 0.580 29 H 0.064 0.936 30 H 0.070 0.930 31 H 0.101 0.899 32 H 0.096 0.904 33 H 0.200 0.800 34 H 0.163 0.837 35 H 0.198 0.802 36 H 0.084 0.916 37 H 0.088 0.912 38 H 0.187 0.813 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.426 2.059 0.018 3.182 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.362 6.362 2 C -0.158 4.158 3 Si 0.674 3.326 4 C -0.296 4.296 5 C 0.045 3.955 6 N -0.312 5.312 7 C 0.193 3.807 8 N -0.327 5.327 9 C 0.032 3.968 10 C -0.123 4.123 11 H 0.137 0.863 12 C -0.167 4.167 13 C 0.023 3.977 14 H 0.139 0.861 15 N -0.149 5.149 16 C -0.093 4.093 17 C -0.319 4.319 18 C -0.154 4.154 19 N -0.166 5.166 20 C -0.170 4.170 21 N -0.301 5.301 22 C 0.027 3.973 23 H 0.245 0.755 24 H 0.130 0.870 25 H -0.225 1.225 26 H -0.210 1.210 27 H 0.198 0.802 28 H 0.258 0.742 29 H 0.082 0.918 30 H 0.089 0.911 31 H 0.120 0.880 32 H 0.115 0.885 33 H 0.217 0.783 34 H 0.181 0.819 35 H 0.215 0.785 36 H 0.102 0.898 37 H 0.106 0.894 38 H 0.203 0.797 Dipole moment (debyes) X Y Z Total from point charges -0.465 0.960 0.283 1.103 hybrid contribution -0.721 0.036 0.654 0.974 sum -1.185 0.996 0.938 1.810 Atomic orbital electron populations 1.86480 1.17158 1.82056 1.50488 1.24788 0.85167 1.10058 0.95836 0.93944 0.77873 0.75231 0.85518 1.21762 1.07615 0.98095 1.02107 1.23119 0.90344 0.91238 0.90787 1.67999 1.16912 1.39903 1.06393 1.19661 0.87335 0.86012 0.87653 1.44201 1.54120 1.14954 1.19437 1.21254 0.93834 0.94197 0.87549 1.22502 0.96563 1.00732 0.92516 0.86322 1.23539 0.95791 1.05126 0.92221 1.23127 1.00241 0.94963 0.79418 0.86104 1.48958 1.22797 1.30054 1.13091 1.22986 0.95011 0.92046 0.99252 1.21881 1.03942 1.09304 0.96785 1.24357 0.96153 0.94598 1.00268 1.77304 1.19538 1.24664 0.95052 1.23384 0.99365 1.01299 0.92928 1.67966 1.28765 1.08694 1.24716 1.23172 0.88149 0.99652 0.86367 0.75519 0.86964 1.22454 1.21007 0.80165 0.74152 0.91780 0.91128 0.88027 0.88535 0.78319 0.81898 0.78503 0.89753 0.89350 0.79704 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.68 12.79 -148.98 -1.91 -0.23 16 2 C -0.05 0.17 2.85 71.24 0.20 0.37 16 3 Si 0.77 -3.76 29.87 68.60 2.05 -1.71 16 4 C -0.29 0.43 5.40 -19.69 -0.11 0.32 16 5 C 0.21 0.23 10.92 84.71 0.93 1.16 16 6 N -0.59 -2.59 10.46 -197.99 -2.07 -4.66 16 7 C 0.55 1.88 8.43 261.49 2.20 4.09 16 8 N -0.69 1.28 5.70 -351.04 -2.00 -0.72 16 9 C 0.16 -0.76 5.49 86.38 0.47 -0.28 16 10 C -0.10 0.86 3.75 -10.27 -0.04 0.82 16 11 H 0.12 -1.20 8.14 -2.39 -0.02 -1.22 16 12 C -0.13 1.03 6.98 31.12 0.22 1.25 16 13 C 0.12 -0.36 5.04 45.52 0.23 -0.13 16 14 H 0.12 -0.33 8.14 -2.39 -0.02 -0.35 16 15 N -0.37 -1.16 3.81 -324.99 -1.24 -2.40 16 16 C 0.05 0.01 10.69 83.54 0.89 0.91 16 17 C -0.29 -0.59 10.80 21.99 0.24 -0.36 16 18 C 0.03 0.16 12.03 85.23 1.02 1.18 16 19 N -0.34 -3.07 12.58 -57.03 -0.72 -3.79 16 20 C -0.13 0.65 7.44 31.12 0.23 0.88 16 21 N -0.58 -1.76 9.59 -197.98 -1.90 -3.66 16 22 C 0.19 -0.17 9.92 84.71 0.84 0.67 16 23 H 0.39 -4.18 8.70 -74.06 -0.64 -4.82 16 24 H 0.11 -0.34 7.96 -2.39 -0.02 -0.36 16 25 H -0.30 -0.89 7.11 99.48 0.71 -0.18 16 26 H -0.28 0.05 7.11 99.48 0.71 0.76 16 27 H 0.18 -0.40 8.06 -2.91 -0.02 -0.42 16 28 H 0.42 -1.82 8.59 -92.70 -0.80 -2.62 16 29 H 0.06 -0.16 8.14 -2.39 -0.02 -0.18 16 30 H 0.07 -0.29 7.85 -2.39 -0.02 -0.31 16 31 H 0.10 -0.89 6.07 -2.39 -0.01 -0.90 16 32 H 0.10 -0.90 8.14 -2.39 -0.02 -0.92 16 33 H 0.20 -1.36 6.69 -2.91 -0.02 -1.38 16 34 H 0.16 -0.36 8.06 -2.91 -0.02 -0.38 16 35 H 0.20 -0.05 8.06 -2.91 -0.02 -0.07 16 36 H 0.08 -0.38 8.14 -2.39 -0.02 -0.40 16 37 H 0.09 -0.30 8.10 -2.39 -0.02 -0.32 16 38 H 0.19 -1.15 5.04 -2.91 -0.01 -1.16 16 Total: 0.00 -20.77 322.62 -0.75 -21.52 By element: Atomic # 1 Polarization: -14.94 SS G_CDS: -0.30 Total: -15.24 kcal Atomic # 6 Polarization: 3.56 SS G_CDS: 7.33 Total: 10.89 kcal Atomic # 7 Polarization: -7.30 SS G_CDS: -7.93 Total: -15.23 kcal Atomic # 8 Polarization: 1.68 SS G_CDS: -1.91 Total: -0.23 kcal Atomic # 14 Polarization: -3.76 SS G_CDS: 2.05 Total: -1.71 kcal Total: -20.77 -0.75 -21.52 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17567482_12175864.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 165.524 kcal (2) G-P(sol) polarization free energy of solvation -20.771 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 144.753 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.746 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.517 kcal (6) G-S(sol) free energy of system = (1) + (5) 144.006 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds