Wall clock time and date at job start Mon Mar 8 2021 06:00:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86301 * 109.47188 * 2 1 4 4 C 1.50705 * 109.47271 * 120.00124 * 2 1 3 5 5 C 1.37984 * 120.32227 * 245.00405 * 4 2 1 6 6 N 1.32014 * 120.89256 * 180.02562 * 5 4 2 7 7 C 1.32336 * 121.65258 * 359.97438 * 6 5 4 8 8 N 1.39143 * 119.71902 * 179.97438 * 7 6 5 9 9 C 1.46501 * 119.99917 * 0.02562 * 8 7 6 10 10 C 1.53004 * 109.46829 * 180.02562 * 9 8 7 11 11 H 1.09000 * 112.84862 * 316.19257 * 10 9 8 12 12 C 1.53780 * 113.61897 * 87.50077 * 10 9 8 13 13 C 1.53775 * 87.08145 * 139.97862 * 12 10 9 14 14 H 1.09003 * 113.69254 * 89.12908 * 13 12 10 15 15 N 1.46500 * 113.61828 * 220.01872 * 13 12 10 16 16 C 1.36883 * 126.40270 * 217.49955 * 15 13 12 17 17 C 1.34666 * 106.81734 * 180.02562 * 16 15 13 18 18 N 1.34126 * 108.02240 * 359.97438 * 17 16 15 19 19 C 1.30494 * 109.25549 * 0.02562 * 18 17 16 20 20 C 1.53779 * 113.61386 * 185.00209 * 10 9 8 21 21 C 1.39346 * 120.55886 * 0.25808 * 7 6 5 22 22 F 1.35104 * 120.46653 * 179.72061 * 21 7 6 23 23 C 1.38445 * 119.05984 * 359.49640 * 21 7 6 24 24 H 0.96707 * 114.00005 * 299.99506 * 1 2 3 25 25 H 1.08996 * 109.46969 * 240.00172 * 2 1 3 26 26 H 1.48498 * 109.99991 * 300.00512 * 3 2 1 27 27 H 1.48511 * 109.99772 * 61.31791 * 3 2 1 28 28 H 1.07992 * 119.55541 * 0.03644 * 5 4 2 29 29 H 0.97002 * 119.99623 * 180.02562 * 8 7 6 30 30 H 1.08994 * 109.46945 * 60.00444 * 9 8 7 31 31 H 1.09001 * 109.47287 * 299.99861 * 9 8 7 32 32 H 1.08998 * 113.60965 * 25.42853 * 12 10 9 33 33 H 1.08998 * 113.61525 * 254.53438 * 12 10 9 34 34 H 1.08000 * 126.58593 * 359.97438 * 16 15 13 35 35 H 1.07999 * 125.98413 * 180.02562 * 17 16 15 36 36 H 1.08006 * 125.64795 * 180.26456 * 19 18 17 37 37 H 1.09003 * 113.61665 * 105.46620 * 20 10 9 38 38 H 1.09000 * 113.61237 * 334.56721 * 20 10 9 39 39 H 1.07992 * 120.75802 * 180.24391 * 23 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6381 -0.0201 2.1937 6 7 3.0838 -0.6313 3.2757 7 6 2.8730 -1.9215 3.4810 8 7 3.3616 -2.5250 4.6356 9 6 4.1052 -1.7325 5.6180 10 6 4.5267 -2.6298 6.7834 11 1 3.7297 -3.2954 7.1148 12 6 5.8717 -3.3406 6.5585 13 6 6.1790 -3.0581 8.0385 14 1 5.8353 -3.8411 8.7144 15 7 7.5682 -2.6636 8.2846 16 6 8.3338 -3.0160 9.3632 17 6 9.5387 -2.4398 9.1907 18 7 9.5099 -1.7548 8.0379 19 6 8.3327 -1.8841 7.4898 20 6 5.2105 -1.8684 7.9311 21 6 2.1711 -2.6820 2.5479 22 9 1.9619 -4.0003 2.7568 23 6 1.6871 -2.0665 1.4061 24 1 -0.3933 0.4417 0.7651 25 1 1.7923 -0.5138 -0.8900 26 1 1.5614 2.4679 -1.2084 27 1 1.5878 2.4586 1.2243 28 1 2.8290 1.0345 2.0609 29 1 3.2098 -3.4706 4.7900 30 1 3.4717 -0.9272 5.9897 31 1 4.9922 -1.3090 5.1468 32 1 6.5323 -2.8167 5.8677 33 1 5.7719 -4.4012 6.3279 34 1 8.0297 -3.6361 10.1935 35 1 10.3809 -2.5167 9.8624 36 1 8.0227 -1.4445 6.5532 37 1 4.5769 -1.7405 8.8088 38 1 5.6903 -0.9419 7.6156 39 1 1.1362 -2.6288 0.6669 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_17567488_17656566.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:00:01 Heat of formation + Delta-G solvation = 64.392261 kcal Electronic energy + Delta-G solvation = -23910.481051 eV Core-core repulsion = 20157.579081 eV Total energy + Delta-G solvation = -3752.901970 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 305.128 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -49.92045 -43.09965 -41.47355 -40.34800 -38.26544 -36.63263 -33.75572 -33.23119 -31.80118 -30.29463 -28.87301 -27.18133 -26.36371 -25.31909 -23.98092 -22.94207 -22.46428 -21.86226 -20.52622 -19.44504 -18.59031 -18.57427 -18.22397 -17.60738 -17.14788 -16.93841 -16.28114 -16.25373 -15.98838 -15.71676 -15.61901 -15.52303 -15.05879 -14.82237 -14.45297 -14.38866 -14.31870 -14.00399 -13.89494 -13.60810 -13.47294 -13.27180 -12.72325 -12.44916 -12.07468 -11.98903 -11.95443 -11.34743 -10.85114 -10.83293 -10.69395 -10.59263 -10.48223 -9.40995 -8.84370 -5.03753 -0.11966 0.07374 1.11255 1.18417 1.50526 1.73667 1.88615 1.89768 2.32488 2.50277 2.95732 3.00635 3.07973 3.18970 3.30330 3.34558 3.39830 3.51479 3.74555 3.79297 3.82723 3.93776 3.98342 3.99983 4.25443 4.32760 4.38703 4.40764 4.44119 4.51828 4.58058 4.64624 4.66310 4.68836 4.82045 4.93166 4.96414 5.29072 5.37108 5.84100 5.86025 6.07185 6.26039 6.31821 6.88458 7.20697 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.062 4.062 3 Si 0.684 3.316 4 C -0.207 4.207 5 C 0.147 3.853 6 N -0.512 5.512 7 C 0.390 3.610 8 N -0.718 5.718 9 C 0.145 3.855 10 C -0.123 4.123 11 H 0.105 0.895 12 C -0.140 4.140 13 C 0.108 3.892 14 H 0.124 0.876 15 N -0.449 5.449 16 C -0.058 4.058 17 C -0.030 4.030 18 N -0.494 5.494 19 C 0.182 3.818 20 C -0.133 4.133 21 C -0.020 4.020 22 F -0.134 7.134 23 C -0.037 4.037 24 H 0.376 0.624 25 H 0.120 0.880 26 H -0.254 1.254 27 H -0.256 1.256 28 H 0.164 0.836 29 H 0.413 0.587 30 H 0.072 0.928 31 H 0.072 0.928 32 H 0.096 0.904 33 H 0.083 0.917 34 H 0.173 0.827 35 H 0.169 0.831 36 H 0.201 0.799 37 H 0.085 0.915 38 H 0.097 0.903 39 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.622 -0.913 1.096 2.160 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.173 4.173 3 Si 0.585 3.415 4 C -0.212 4.212 5 C -0.010 4.010 6 N -0.229 5.229 7 C 0.151 3.849 8 N -0.351 5.351 9 C 0.022 3.978 10 C -0.142 4.142 11 H 0.123 0.877 12 C -0.178 4.178 13 C 0.004 3.996 14 H 0.142 0.858 15 N -0.132 5.132 16 C -0.190 4.190 17 C -0.178 4.178 18 N -0.211 5.211 19 C -0.100 4.100 20 C -0.172 4.172 21 C -0.046 4.046 22 F -0.113 7.113 23 C -0.064 4.064 24 H 0.224 0.776 25 H 0.138 0.862 26 H -0.178 1.178 27 H -0.181 1.181 28 H 0.180 0.820 29 H 0.250 0.750 30 H 0.090 0.910 31 H 0.090 0.910 32 H 0.115 0.885 33 H 0.102 0.898 34 H 0.190 0.810 35 H 0.187 0.813 36 H 0.217 0.783 37 H 0.104 0.896 38 H 0.116 0.884 39 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges -0.649 0.562 0.986 1.307 hybrid contribution -2.355 -1.880 0.437 3.045 sum -3.004 -1.318 1.423 3.576 Atomic orbital electron populations 1.86619 1.17687 1.79941 1.49348 1.24834 0.83910 1.10852 0.97659 0.95055 0.91537 0.74236 0.80719 1.20869 1.05707 0.94551 1.00077 1.22408 0.91549 0.99561 0.87514 1.67317 1.25028 1.07227 1.23367 1.18422 0.90562 0.88981 0.86926 1.44516 1.59488 1.12123 1.18985 1.21277 0.96274 0.93203 0.87096 1.22652 0.97090 0.98558 0.95891 0.87718 1.23551 0.96747 1.02622 0.94840 1.23059 0.78560 0.99051 0.98896 0.85787 1.45582 1.11528 1.37991 1.18121 1.22786 0.93553 1.07902 0.94765 1.22366 0.97587 1.00909 0.96905 1.70337 1.19407 1.22318 1.09075 1.24854 0.87483 0.98439 0.99256 1.23428 0.97176 0.97738 0.98882 1.18007 1.08699 0.79452 0.98477 1.91494 1.93737 1.31089 1.94948 1.21296 0.95479 0.94443 0.95143 0.77590 0.86202 1.17818 1.18093 0.81953 0.75029 0.90952 0.90963 0.88523 0.89817 0.80968 0.81334 0.78288 0.89637 0.88439 0.83289 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.06 12.84 -35.23 -0.45 -0.51 16 2 C -0.06 0.09 2.82 36.01 0.10 0.20 16 3 Si 0.68 -1.52 29.91 -169.99 -5.08 -6.60 16 4 C -0.21 0.17 5.36 -104.47 -0.56 -0.39 16 5 C 0.15 -0.09 9.84 -17.57 -0.17 -0.26 16 6 N -0.51 -0.42 9.57 -12.37 -0.12 -0.53 16 7 C 0.39 0.22 7.49 -154.86 -1.16 -0.94 16 8 N -0.72 1.11 5.71 -60.34 -0.34 0.76 16 9 C 0.15 -0.41 5.53 -4.04 -0.02 -0.44 16 10 C -0.12 0.57 3.75 -89.81 -0.34 0.23 16 11 H 0.10 -0.55 8.14 -51.93 -0.42 -0.97 16 12 C -0.14 0.57 7.18 -25.92 -0.19 0.38 16 13 C 0.11 -0.36 4.64 -67.12 -0.31 -0.68 16 14 H 0.12 -0.56 8.14 -51.93 -0.42 -0.98 16 15 N -0.45 0.15 2.94 -110.59 -0.33 -0.17 16 16 C -0.06 -0.03 11.58 -16.56 -0.19 -0.22 16 17 C -0.03 -0.08 11.87 -17.81 -0.21 -0.29 16 18 N -0.49 -2.18 11.25 -14.67 -0.16 -2.34 16 19 C 0.18 0.23 11.37 -90.38 -1.03 -0.79 16 20 C -0.13 0.54 7.32 -25.92 -0.19 0.35 16 21 C -0.02 -0.02 7.35 -39.09 -0.29 -0.30 16 22 F -0.13 -0.19 16.65 2.25 0.04 -0.15 16 23 C -0.04 0.00 9.82 -39.26 -0.39 -0.39 16 24 H 0.38 -1.00 8.70 45.56 0.40 -0.61 16 25 H 0.12 -0.27 7.96 -51.93 -0.41 -0.69 16 26 H -0.25 -0.32 7.11 56.52 0.40 0.08 16 27 H -0.26 0.13 7.01 56.52 0.40 0.53 16 28 H 0.16 -0.42 4.84 -52.49 -0.25 -0.68 16 29 H 0.41 -1.08 7.94 -40.82 -0.32 -1.40 16 30 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 31 H 0.07 -0.17 7.84 -51.93 -0.41 -0.57 16 32 H 0.10 -0.34 6.67 -51.93 -0.35 -0.69 16 33 H 0.08 -0.35 8.14 -51.93 -0.42 -0.77 16 34 H 0.17 -0.40 8.06 -52.49 -0.42 -0.82 16 35 H 0.17 0.13 8.06 -52.49 -0.42 -0.30 16 36 H 0.20 -0.32 7.43 -52.48 -0.39 -0.71 16 37 H 0.08 -0.36 8.14 -51.93 -0.42 -0.79 16 38 H 0.10 -0.33 7.86 -51.93 -0.41 -0.74 16 39 H 0.15 -0.12 8.06 -52.49 -0.42 -0.54 16 LS Contribution 333.05 15.07 5.02 5.02 Total: 0.00 -8.16 333.05 -11.11 -19.27 By element: Atomic # 1 Polarization: -6.47 SS G_CDS: -4.73 Total: -11.21 kcal Atomic # 6 Polarization: 1.41 SS G_CDS: -4.94 Total: -3.53 kcal Atomic # 7 Polarization: -1.34 SS G_CDS: -0.95 Total: -2.29 kcal Atomic # 8 Polarization: -0.06 SS G_CDS: -0.45 Total: -0.51 kcal Atomic # 9 Polarization: -0.19 SS G_CDS: 0.04 Total: -0.15 kcal Atomic # 14 Polarization: -1.52 SS G_CDS: -5.08 Total: -6.60 kcal Total LS contribution 5.02 Total: 5.02 kcal Total: -8.16 -11.11 -19.27 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17567488_17656566.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 83.664 kcal (2) G-P(sol) polarization free energy of solvation -8.165 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 75.500 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.107 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.272 kcal (6) G-S(sol) free energy of system = (1) + (5) 64.392 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds