Wall clock time and date at job start Mon Mar 8 2021 06:00:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34773 * 1 3 3 O 1.21593 * 119.99894 * 2 1 4 4 N 1.34777 * 120.00097 * 179.72872 * 2 1 3 5 5 C 1.46504 * 119.99854 * 180.27545 * 4 2 1 6 6 H 1.08999 * 109.46902 * 324.99605 * 5 4 2 7 7 C 1.52995 * 109.47009 * 84.99752 * 5 4 2 8 8 C 1.53009 * 109.46932 * 179.97438 * 7 5 4 9 9 C 1.52999 * 109.47168 * 300.00325 * 8 7 5 10 10 H 1.08998 * 109.46647 * 299.99878 * 9 8 7 11 11 N 1.46499 * 109.47233 * 180.02562 * 9 8 7 12 12 C 1.38402 * 120.00364 * 84.99543 * 11 9 8 13 13 N 1.32497 * 119.21673 * 359.73314 * 12 11 9 14 14 C 1.32278 * 120.74058 * 179.71882 * 13 12 11 15 15 C 1.38603 * 119.19300 * 0.54423 * 14 13 12 16 16 C 1.50703 * 120.71559 * 179.70677 * 15 14 13 17 17 O 1.42899 * 109.47411 * 245.01798 * 16 15 14 18 18 Si 1.86297 * 109.47288 * 5.02310 * 16 15 14 19 19 C 1.38602 * 118.56480 * 359.73066 * 15 14 13 20 20 N 1.32279 * 119.19401 * 359.97438 * 19 15 14 21 21 C 1.53000 * 109.47345 * 59.99482 * 9 8 7 22 22 C 1.53000 * 109.47057 * 300.00142 * 21 9 8 23 23 H 0.96998 * 120.00525 * 359.97438 * 1 2 3 24 24 H 0.97000 * 120.00112 * 180.02562 * 1 2 3 25 25 H 0.97000 * 119.99736 * 0.26819 * 4 2 1 26 26 H 1.09001 * 109.47135 * 299.99446 * 7 5 4 27 27 H 1.08999 * 109.47409 * 60.00164 * 7 5 4 28 28 H 1.08993 * 109.47193 * 179.97438 * 8 7 5 29 29 H 1.08999 * 109.46735 * 60.00002 * 8 7 5 30 30 H 0.97001 * 119.99738 * 265.00107 * 11 9 8 31 31 H 1.07999 * 120.40245 * 180.29477 * 14 13 12 32 32 H 1.09004 * 109.46780 * 125.02473 * 16 15 14 33 33 H 0.96700 * 113.99557 * 60.00395 * 17 16 15 34 34 H 1.48503 * 109.99902 * 179.97438 * 18 16 15 35 35 H 1.48493 * 109.99913 * 301.31637 * 18 16 15 36 36 H 1.07998 * 120.40309 * 179.97438 * 19 15 14 37 37 H 1.08995 * 109.47001 * 179.97438 * 21 9 8 38 38 H 1.08999 * 109.47045 * 60.00025 * 21 9 8 39 39 H 1.08998 * 109.47599 * 300.00011 * 22 21 9 40 40 H 1.09002 * 109.46883 * 179.97438 * 22 21 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3477 0.0000 0.0000 3 8 1.9557 1.0530 0.0000 4 7 2.0216 -1.1672 0.0055 5 6 3.4867 -1.1671 0.0116 6 1 3.8524 -0.3267 -0.5783 7 6 3.9906 -1.0379 1.4504 8 6 5.5207 -1.0385 1.4568 9 6 6.0328 -2.3475 0.8526 10 1 5.6666 -3.1877 1.4426 11 7 7.4977 -2.3483 0.8593 12 6 8.1844 -2.7559 1.9896 13 7 7.5013 -3.1372 3.0590 14 6 8.1268 -3.5377 4.1535 15 6 9.5127 -3.5443 4.1762 16 6 10.2603 -3.9877 5.4073 17 8 10.9894 -2.8828 5.9455 18 14 9.0495 -4.6111 6.6784 19 6 10.1959 -3.1339 3.0423 20 7 9.5093 -2.7509 1.9785 21 6 5.5287 -2.4767 -0.5862 22 6 3.9987 -2.4762 -0.5925 23 1 -0.4851 0.8400 0.0004 24 1 -0.4850 -0.8400 0.0004 25 1 1.5366 -2.0072 0.0056 26 1 3.6255 -0.1055 1.8810 27 1 3.6249 -1.8784 2.0404 28 1 5.8798 -0.9460 2.4817 29 1 5.8867 -0.1983 0.8668 30 1 7.9865 -2.0631 0.0714 31 1 7.5645 -3.8519 5.0204 32 1 10.9536 -4.7863 5.1433 33 1 10.4348 -2.1336 6.2029 34 1 9.7744 -5.0520 7.8971 35 1 8.0791 -3.5413 7.0231 36 1 11.2758 -3.1269 3.0274 37 1 5.8939 -3.4090 -1.0168 38 1 5.8947 -1.6365 -1.1763 39 1 3.6325 -3.3163 -0.0025 40 1 3.6396 -2.5678 -1.6176 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_17567490_12175864.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:00:05 Heat of formation + Delta-G solvation = -7.941763 kcal Electronic energy + Delta-G solvation = -23516.304351 eV Core-core repulsion = 19946.526277 eV Total energy + Delta-G solvation = -3569.778074 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 294.148 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -42.08804 -41.10626 -39.61099 -38.15314 -36.55798 -34.84627 -34.65954 -34.00377 -32.19038 -31.90984 -29.16595 -26.47318 -25.81354 -23.91681 -23.74315 -22.80506 -21.81603 -21.26326 -19.50206 -19.02096 -18.70265 -18.33291 -18.11740 -16.75704 -16.58537 -16.19929 -16.12532 -16.06563 -15.75372 -15.75227 -15.34497 -15.10839 -14.80759 -14.60141 -14.07964 -13.97938 -13.69416 -13.31411 -13.19490 -12.67152 -12.59377 -12.23997 -12.20132 -11.83551 -11.78685 -11.69042 -11.53075 -11.22716 -11.09254 -10.70817 -10.64114 -9.99757 -9.97512 -9.08484 -5.03145 0.09654 0.19636 1.22101 1.51800 1.76188 1.91336 1.96333 2.28343 2.85109 3.16575 3.33175 3.46641 3.56106 3.58348 3.63527 3.73136 3.76181 3.97304 4.03552 4.12901 4.20873 4.32515 4.36157 4.38378 4.55220 4.61649 4.65171 4.79523 4.87995 4.93770 4.98649 5.17128 5.18459 5.25375 5.37400 5.53688 5.74804 5.81628 5.96830 6.04622 6.35031 6.43993 6.98158 7.33138 7.68500 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.869 5.869 2 C 0.705 3.295 3 O -0.593 6.593 4 N -0.742 5.742 5 C 0.161 3.839 6 H 0.090 0.910 7 C -0.125 4.125 8 C -0.126 4.126 9 C 0.159 3.841 10 H 0.095 0.905 11 N -0.692 5.692 12 C 0.569 3.431 13 N -0.561 5.561 14 C 0.197 3.803 15 C -0.294 4.294 16 C -0.053 4.053 17 O -0.530 6.530 18 Si 0.679 3.321 19 C 0.224 3.776 20 N -0.570 5.570 21 C -0.124 4.124 22 C -0.121 4.121 23 H 0.415 0.585 24 H 0.397 0.603 25 H 0.396 0.604 26 H 0.072 0.928 27 H 0.067 0.933 28 H 0.071 0.929 29 H 0.066 0.934 30 H 0.414 0.586 31 H 0.166 0.834 32 H 0.120 0.880 33 H 0.376 0.624 34 H -0.253 1.253 35 H -0.258 1.258 36 H 0.170 0.830 37 H 0.077 0.923 38 H 0.074 0.926 39 H 0.073 0.927 40 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.044 -5.656 -0.983 7.023 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.437 5.437 2 C 0.403 3.597 3 O -0.470 6.470 4 N -0.398 5.398 5 C 0.055 3.945 6 H 0.108 0.892 7 C -0.165 4.165 8 C -0.165 4.165 9 C 0.054 3.946 10 H 0.113 0.887 11 N -0.327 5.327 12 C 0.213 3.787 13 N -0.283 5.283 14 C 0.029 3.971 15 C -0.302 4.302 16 C -0.164 4.164 17 O -0.336 6.336 18 Si 0.580 3.420 19 C 0.055 3.945 20 N -0.292 5.292 21 C -0.163 4.163 22 C -0.159 4.159 23 H 0.248 0.752 24 H 0.224 0.776 25 H 0.230 0.770 26 H 0.090 0.910 27 H 0.086 0.914 28 H 0.089 0.911 29 H 0.084 0.916 30 H 0.252 0.748 31 H 0.183 0.817 32 H 0.138 0.862 33 H 0.223 0.777 34 H -0.178 1.178 35 H -0.183 1.183 36 H 0.187 0.813 37 H 0.096 0.904 38 H 0.092 0.908 39 H 0.092 0.908 40 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges -3.920 -4.823 -1.157 6.322 hybrid contribution 0.205 0.598 0.555 0.841 sum -3.715 -4.225 -0.602 5.658 Atomic orbital electron populations 1.43027 1.05458 1.12670 1.82500 1.16000 0.82073 0.84317 0.77335 1.90995 1.67791 1.30424 1.57835 1.45170 1.07198 1.07108 1.80289 1.20907 0.77903 0.98837 0.96817 0.89156 1.21889 0.94955 1.03049 0.96589 1.21899 0.95078 0.97459 1.02083 1.21052 0.77620 0.99104 0.96779 0.88694 1.44278 1.06044 1.69820 1.12547 1.19400 0.85217 0.87264 0.86851 1.67944 1.40495 1.19380 1.00471 1.22837 0.91043 0.88514 0.94669 1.21630 0.96122 1.12320 1.00123 1.24668 1.02494 0.92344 0.96901 1.86613 1.36630 1.27453 1.82906 0.95211 0.79343 0.87443 0.80005 1.22836 1.00420 0.85604 0.85594 1.67996 1.07033 1.23260 1.30863 1.21750 0.95264 1.03446 0.95815 1.21727 0.95069 0.97124 1.02014 0.75240 0.77553 0.77001 0.90958 0.91405 0.91071 0.91562 0.74848 0.81747 0.86250 0.77665 1.17793 1.18264 0.81332 0.90407 0.90776 0.90797 0.90470 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.87 1.74 8.88 27.63 0.25 1.99 16 2 C 0.70 1.23 8.80 -86.92 -0.77 0.47 16 3 O -0.59 -4.04 16.84 5.28 0.09 -3.95 16 4 N -0.74 0.95 5.08 -58.68 -0.30 0.65 16 5 C 0.16 -0.13 2.46 -67.93 -0.17 -0.30 16 6 H 0.09 0.13 7.58 -51.93 -0.39 -0.26 16 7 C -0.13 0.02 5.49 -26.73 -0.15 -0.13 16 8 C -0.13 0.00 5.51 -26.73 -0.15 -0.15 16 9 C 0.16 -0.16 2.44 -67.93 -0.17 -0.33 16 10 H 0.10 -0.02 7.51 -51.93 -0.39 -0.41 16 11 N -0.69 -0.17 5.22 -55.80 -0.29 -0.46 16 12 C 0.57 1.32 8.40 -322.81 -2.71 -1.39 16 13 N -0.56 -1.10 9.21 -13.93 -0.13 -1.23 16 14 C 0.20 0.05 9.92 -17.22 -0.17 -0.13 16 15 C -0.29 0.05 5.36 -104.35 -0.56 -0.51 16 16 C -0.05 0.06 2.83 36.01 0.10 0.17 16 17 O -0.53 -0.20 12.85 -35.23 -0.45 -0.65 16 18 Si 0.68 -1.28 29.95 -169.99 -5.09 -6.37 16 19 C 0.22 0.23 10.99 -17.22 -0.19 0.04 16 20 N -0.57 -1.55 10.46 -13.93 -0.15 -1.69 16 21 C -0.12 0.34 5.39 -26.73 -0.14 0.20 16 22 C -0.12 0.38 5.39 -26.73 -0.14 0.23 16 23 H 0.42 -0.95 8.93 -40.82 -0.36 -1.31 16 24 H 0.40 -2.06 8.84 -40.82 -0.36 -2.42 16 25 H 0.40 -1.67 8.62 -40.82 -0.35 -2.02 16 26 H 0.07 0.17 8.14 -51.93 -0.42 -0.26 16 27 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 28 H 0.07 0.12 8.14 -51.93 -0.42 -0.30 16 29 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 30 H 0.41 -0.31 8.72 -40.82 -0.36 -0.66 16 31 H 0.17 -0.33 5.01 -52.49 -0.26 -0.60 16 32 H 0.12 -0.26 7.96 -51.93 -0.41 -0.67 16 33 H 0.38 -0.80 8.70 45.56 0.40 -0.40 16 34 H -0.25 -0.39 7.11 56.52 0.40 0.01 16 35 H -0.26 0.00 7.02 56.52 0.40 0.40 16 36 H 0.17 -0.13 8.06 -52.49 -0.42 -0.55 16 37 H 0.08 -0.23 8.14 -51.93 -0.42 -0.66 16 38 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 39 H 0.07 -0.29 8.14 -51.93 -0.42 -0.71 16 40 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 LS Contribution 330.66 15.07 4.98 4.98 Total: 0.00 -9.76 330.66 -11.80 -21.56 By element: Atomic # 1 Polarization: -7.48 SS G_CDS: -5.50 Total: -12.98 kcal Atomic # 6 Polarization: 3.36 SS G_CDS: -5.21 Total: -1.85 kcal Atomic # 7 Polarization: -0.13 SS G_CDS: -0.62 Total: -0.75 kcal Atomic # 8 Polarization: -4.24 SS G_CDS: -0.36 Total: -4.60 kcal Atomic # 14 Polarization: -1.28 SS G_CDS: -5.09 Total: -6.37 kcal Total LS contribution 4.98 Total: 4.98 kcal Total: -9.76 -11.80 -21.56 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17567490_12175864.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 13.619 kcal (2) G-P(sol) polarization free energy of solvation -9.757 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 3.862 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.804 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.561 kcal (6) G-S(sol) free energy of system = (1) + (5) -7.942 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds