Wall clock time and date at job start Mon Mar 8 2021 06:00:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34775 * 1 3 3 O 1.21583 * 120.00144 * 2 1 4 4 N 1.34777 * 119.99585 * 179.97438 * 2 1 3 5 5 C 1.46499 * 119.99665 * 179.72218 * 4 2 1 6 6 H 1.08999 * 109.47480 * 35.27807 * 5 4 2 7 7 C 1.52999 * 109.47493 * 155.28120 * 5 4 2 8 8 C 1.52992 * 109.47689 * 180.02562 * 7 5 4 9 9 C 1.52999 * 109.46921 * 299.99639 * 8 7 5 10 10 H 1.09000 * 109.47077 * 299.99701 * 9 8 7 11 11 N 1.46499 * 109.47136 * 179.97438 * 9 8 7 12 12 C 1.39010 * 119.99924 * 154.99990 * 11 9 8 13 13 C 1.39088 * 119.70498 * 359.97438 * 12 11 9 14 14 C 1.38344 * 119.09684 * 179.97438 * 13 12 11 15 15 C 1.38832 * 118.50975 * 0.02562 * 14 13 12 16 16 C 1.50698 * 120.34398 * 180.02562 * 15 14 13 17 17 O 1.42905 * 109.47042 * 300.00259 * 16 15 14 18 18 Si 1.86295 * 109.47768 * 179.97438 * 16 15 14 19 19 C 1.38074 * 119.32470 * 359.97438 * 15 14 13 20 20 N 1.31941 * 120.85401 * 359.74250 * 19 15 14 21 21 C 1.53002 * 109.47179 * 60.00100 * 9 8 7 22 22 C 1.52999 * 109.47136 * 275.27771 * 5 4 2 23 23 H 0.97000 * 120.00523 * 180.02562 * 1 2 3 24 24 H 0.97004 * 120.00164 * 359.97438 * 1 2 3 25 25 H 0.97001 * 120.00485 * 0.02562 * 4 2 1 26 26 H 1.09009 * 109.46506 * 300.00089 * 7 5 4 27 27 H 1.08999 * 109.47014 * 59.99401 * 7 5 4 28 28 H 1.08999 * 109.47499 * 59.99555 * 8 7 5 29 29 H 1.09006 * 109.47246 * 179.97438 * 8 7 5 30 30 H 0.96999 * 120.00053 * 334.99985 * 11 9 8 31 31 H 1.07998 * 120.45488 * 359.95775 * 13 12 11 32 32 H 1.08003 * 120.74800 * 180.02562 * 14 13 12 33 33 H 1.09008 * 109.46906 * 59.99759 * 16 15 14 34 34 H 0.96698 * 113.99787 * 179.97438 * 17 16 15 35 35 H 1.48502 * 110.00148 * 298.68556 * 18 16 15 36 36 H 1.48505 * 109.99704 * 60.00217 * 18 16 15 37 37 H 1.08006 * 119.57296 * 179.97438 * 19 15 14 38 38 H 1.08999 * 109.47056 * 60.00198 * 21 9 8 39 39 H 1.09000 * 109.46999 * 179.97438 * 21 9 8 40 40 H 1.09006 * 109.47500 * 299.99940 * 22 5 4 41 41 H 1.08999 * 109.47488 * 60.00276 * 22 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3477 0.0000 0.0000 3 8 1.9557 1.0529 0.0000 4 7 2.0215 -1.1673 0.0005 5 6 3.4865 -1.1673 -0.0056 6 1 3.8524 -0.3267 0.5839 7 6 3.9991 -2.4758 0.5992 8 6 5.5290 -2.4757 0.5934 9 6 6.0335 -2.3468 -0.8453 10 1 5.6680 -3.1875 -1.4351 11 7 7.4985 -2.3460 -0.8509 12 6 8.1894 -2.7551 -1.9856 13 6 7.4837 -3.1646 -3.1121 14 6 8.1841 -3.5687 -4.2346 15 6 9.5716 -3.5501 -4.1923 16 6 10.3757 -3.9812 -5.3917 17 8 10.0626 -5.3382 -5.7124 18 14 12.1926 -3.8369 -5.0060 19 6 10.2075 -3.1317 -3.0403 20 7 9.5137 -2.7463 -1.9863 21 6 5.5210 -1.0382 -1.4502 22 6 3.9905 -1.0387 -1.4445 23 1 -0.4851 -0.8400 0.0004 24 1 -0.4850 0.8401 0.0004 25 1 1.5366 -2.0073 0.0005 26 1 3.6400 -2.5674 1.6243 27 1 3.6332 -3.3165 0.0096 28 1 5.8946 -1.6351 1.1832 29 1 5.8942 -3.4078 1.0247 30 1 7.9863 -2.0600 -0.0628 31 1 6.4037 -3.1672 -3.1104 32 1 7.6631 -3.8914 -5.1240 33 1 10.1329 -3.3420 -6.2407 34 1 10.5446 -5.6829 -6.4765 35 1 12.5367 -2.4246 -4.7022 36 1 12.5367 -4.7034 -3.8502 37 1 11.2868 -3.1161 -3.0028 38 1 5.8866 -0.1976 -0.8604 39 1 5.8808 -0.9462 -2.4750 40 1 3.6247 -1.8794 -2.0342 41 1 3.6254 -0.1065 -1.8755 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_17567490_13915762.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:00:09 Heat of formation + Delta-G solvation = -23.426974 kcal Electronic energy + Delta-G solvation = -23339.751120 eV Core-core repulsion = 19834.727468 eV Total energy + Delta-G solvation = -3505.023652 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 293.153 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -41.55251 -41.03751 -39.60013 -37.84006 -36.50930 -34.84562 -34.04236 -33.28912 -32.02069 -31.51874 -29.06565 -26.12465 -24.95751 -23.85134 -23.62770 -22.26471 -21.80507 -21.25486 -19.27340 -18.64562 -18.44960 -18.34493 -18.01514 -16.78293 -16.41544 -16.25460 -16.14824 -15.80047 -15.58473 -15.33563 -15.08247 -15.01343 -14.71169 -14.20869 -14.10518 -13.89395 -13.71858 -13.66778 -13.37474 -12.69440 -12.68823 -12.31248 -12.24631 -11.93715 -11.72843 -11.65479 -11.25449 -11.04684 -10.68953 -10.66734 -10.54050 -10.16278 -10.03666 -8.67210 -4.96459 0.25976 0.46514 1.31998 1.66852 1.82593 1.99955 2.08947 2.24815 2.85145 3.41799 3.45516 3.47213 3.51893 3.58399 3.83299 3.88444 3.91380 4.01248 4.02346 4.12900 4.19930 4.27503 4.29539 4.37400 4.45078 4.53912 4.61791 4.75210 4.80877 4.86383 4.93393 5.03256 5.06320 5.14247 5.21723 5.34227 5.48435 5.53400 5.71045 5.93874 6.02165 6.54570 6.65571 6.94496 7.17808 7.65116 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.868 5.868 2 C 0.705 3.295 3 O -0.592 6.592 4 N -0.743 5.743 5 C 0.161 3.839 6 H 0.091 0.909 7 C -0.122 4.122 8 C -0.122 4.122 9 C 0.153 3.847 10 H 0.084 0.916 11 N -0.719 5.719 12 C 0.409 3.591 13 C -0.238 4.238 14 C -0.002 4.002 15 C -0.191 4.191 16 C -0.055 4.055 17 O -0.548 6.548 18 Si 0.677 3.323 19 C 0.151 3.849 20 N -0.539 5.539 21 C -0.133 4.133 22 C -0.127 4.127 23 H 0.397 0.603 24 H 0.416 0.584 25 H 0.396 0.604 26 H 0.077 0.923 27 H 0.073 0.927 28 H 0.075 0.925 29 H 0.078 0.922 30 H 0.406 0.594 31 H 0.136 0.864 32 H 0.137 0.863 33 H 0.072 0.928 34 H 0.381 0.619 35 H -0.253 1.253 36 H -0.249 1.249 37 H 0.145 0.855 38 H 0.072 0.928 39 H 0.071 0.929 40 H 0.066 0.934 41 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.041 -4.164 -2.566 5.759 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.436 5.436 2 C 0.403 3.597 3 O -0.470 6.470 4 N -0.398 5.398 5 C 0.055 3.945 6 H 0.109 0.891 7 C -0.160 4.160 8 C -0.161 4.161 9 C 0.048 3.952 10 H 0.102 0.898 11 N -0.351 5.351 12 C 0.174 3.826 13 C -0.263 4.263 14 C -0.028 4.028 15 C -0.196 4.196 16 C -0.167 4.167 17 O -0.354 6.354 18 Si 0.579 3.421 19 C -0.007 4.007 20 N -0.256 5.256 21 C -0.172 4.172 22 C -0.167 4.167 23 H 0.225 0.775 24 H 0.248 0.752 25 H 0.230 0.770 26 H 0.096 0.904 27 H 0.091 0.909 28 H 0.094 0.906 29 H 0.097 0.903 30 H 0.241 0.759 31 H 0.153 0.847 32 H 0.155 0.845 33 H 0.090 0.910 34 H 0.229 0.771 35 H -0.178 1.178 36 H -0.174 1.174 37 H 0.162 0.838 38 H 0.091 0.909 39 H 0.089 0.911 40 H 0.084 0.916 41 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges -1.935 -2.778 -0.689 3.455 hybrid contribution -1.522 -0.441 -0.374 1.628 sum -3.457 -3.219 -1.063 4.842 Atomic orbital electron populations 1.43029 1.05443 1.12694 1.82463 1.15997 0.82088 0.84296 0.77340 1.90996 1.67782 1.30407 1.57789 1.45167 1.07154 1.07137 1.80348 1.20894 0.77967 0.98900 0.96698 0.89065 1.21743 0.95116 0.97061 1.02125 1.21716 0.95120 1.03636 0.95605 1.21083 0.78548 0.98251 0.97336 0.89768 1.44575 1.05148 1.71456 1.13874 1.18368 0.87989 0.89301 0.86982 1.21489 1.01068 1.09716 0.93989 1.21168 0.92850 0.91252 0.97534 1.20020 0.94887 1.08392 0.96320 1.24421 1.09227 0.85851 0.97198 1.86489 1.69897 1.25619 1.53420 0.95361 0.78041 0.81649 0.87090 1.22003 0.98565 0.92767 0.87343 1.67125 1.06529 1.22172 1.29786 1.22026 0.95101 0.97971 1.02148 1.21927 0.94894 1.03107 0.96762 0.77545 0.75208 0.76999 0.90389 0.90872 0.90625 0.90321 0.75857 0.84663 0.84488 0.90996 0.77122 1.17810 1.17372 0.83785 0.90948 0.91073 0.91562 0.90731 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.87 1.86 8.88 27.63 0.25 2.10 16 2 C 0.70 1.11 8.80 -86.92 -0.76 0.34 16 3 O -0.59 -3.93 16.84 5.29 0.09 -3.84 16 4 N -0.74 1.11 5.08 -58.68 -0.30 0.81 16 5 C 0.16 -0.17 2.45 -67.93 -0.17 -0.34 16 6 H 0.09 0.12 7.58 -51.93 -0.39 -0.28 16 7 C -0.12 0.39 5.39 -26.74 -0.14 0.25 16 8 C -0.12 0.32 5.39 -26.74 -0.14 0.18 16 9 C 0.15 -0.22 2.14 -67.93 -0.15 -0.36 16 10 H 0.08 -0.14 6.45 -51.93 -0.33 -0.48 16 11 N -0.72 -0.51 5.24 -53.94 -0.28 -0.79 16 12 C 0.41 1.31 7.63 -155.01 -1.18 0.13 16 13 C -0.24 -0.47 8.83 -39.23 -0.35 -0.82 16 14 C 0.00 -0.01 9.76 -39.32 -0.38 -0.39 16 15 C -0.19 -0.58 5.43 -104.46 -0.57 -1.15 16 16 C -0.06 -0.02 2.83 36.00 0.10 0.09 16 17 O -0.55 -0.18 12.76 -35.23 -0.45 -0.63 16 18 Si 0.68 -0.43 29.82 -169.99 -5.07 -5.50 16 19 C 0.15 0.66 9.84 -17.57 -0.17 0.49 16 20 N -0.54 -2.76 10.39 -12.43 -0.13 -2.89 16 21 C -0.13 0.09 5.42 -26.70 -0.14 -0.05 16 22 C -0.13 0.10 5.49 -26.70 -0.15 -0.05 16 23 H 0.40 -2.10 8.84 -40.82 -0.36 -2.46 16 24 H 0.42 -1.00 8.93 -40.82 -0.36 -1.36 16 25 H 0.40 -1.74 8.62 -40.82 -0.35 -2.09 16 26 H 0.08 -0.26 8.14 -51.92 -0.42 -0.68 16 27 H 0.07 -0.30 8.14 -51.93 -0.42 -0.73 16 28 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 29 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 30 H 0.41 0.14 8.73 -40.82 -0.36 -0.21 16 31 H 0.14 -0.02 6.08 -52.49 -0.32 -0.34 16 32 H 0.14 0.07 8.06 -52.48 -0.42 -0.36 16 33 H 0.07 -0.10 7.96 -51.92 -0.41 -0.51 16 34 H 0.38 -1.81 8.74 45.56 0.40 -1.41 16 35 H -0.25 -0.47 7.11 56.52 0.40 -0.07 16 36 H -0.25 -0.66 7.11 56.52 0.40 -0.26 16 37 H 0.15 0.51 4.88 -52.48 -0.26 0.25 16 38 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 39 H 0.07 0.01 7.66 -51.93 -0.40 -0.38 16 40 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 41 H 0.07 0.12 8.14 -51.93 -0.42 -0.30 16 LS Contribution 332.17 15.07 5.01 5.01 Total: 0.00 -10.44 332.17 -10.83 -21.27 By element: Atomic # 1 Polarization: -8.12 SS G_CDS: -5.73 Total: -13.85 kcal Atomic # 6 Polarization: 2.52 SS G_CDS: -4.21 Total: -1.69 kcal Atomic # 7 Polarization: -0.31 SS G_CDS: -0.47 Total: -0.77 kcal Atomic # 8 Polarization: -4.10 SS G_CDS: -0.36 Total: -4.46 kcal Atomic # 14 Polarization: -0.43 SS G_CDS: -5.07 Total: -5.50 kcal Total LS contribution 5.01 Total: 5.01 kcal Total: -10.44 -10.83 -21.27 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17567490_13915762.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -2.158 kcal (2) G-P(sol) polarization free energy of solvation -10.443 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -12.601 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.826 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.269 kcal (6) G-S(sol) free energy of system = (1) + (5) -23.427 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds