Wall clock time and date at job start Mon Mar 8 2021 06:00:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 C 1.33317 * 125.95377 * 2 1 4 4 C 1.50706 * 122.71096 * 0.02562 * 3 2 1 5 5 O 1.42906 * 109.46702 * 329.73140 * 4 3 2 6 6 Si 1.86301 * 109.47233 * 209.73429 * 4 3 2 7 7 N 1.32124 * 114.58070 * 179.75438 * 3 2 1 8 8 C 1.29679 * 116.86669 * 0.24872 * 7 3 2 9 9 N 1.38605 * 124.95288 * 180.02562 * 8 7 3 10 10 C 1.46502 * 120.00668 * 179.97438 * 9 8 7 11 11 H 1.09002 * 109.46612 * 34.99608 * 10 9 8 12 12 C 1.52994 * 109.47408 * 154.99841 * 10 9 8 13 13 C 1.52997 * 109.47073 * 180.02562 * 12 10 9 14 14 C 1.52992 * 109.47359 * 299.99896 * 13 12 10 15 15 H 1.09003 * 109.47543 * 300.00019 * 14 13 12 16 16 N 1.46505 * 109.47469 * 179.97438 * 14 13 12 17 17 C 1.34774 * 119.99916 * 155.00003 * 16 14 13 18 18 N 1.34773 * 119.99827 * 180.02562 * 17 16 14 19 19 O 1.21593 * 120.00030 * 0.02562 * 17 16 14 20 20 C 1.53001 * 109.47197 * 60.00037 * 14 13 12 21 21 C 1.52998 * 109.46860 * 275.00143 * 10 9 8 22 22 S 1.70968 * 110.10327 * 359.97438 * 8 7 3 23 23 H 1.09000 * 109.47364 * 90.00113 * 1 2 3 24 24 H 1.09002 * 109.46944 * 210.00161 * 1 2 3 25 25 H 1.09001 * 109.46724 * 329.99627 * 1 2 3 26 26 H 1.09000 * 109.47318 * 89.72719 * 4 3 2 27 27 H 0.96698 * 113.99410 * 179.97438 * 5 4 3 28 28 H 1.48497 * 109.99842 * 59.99960 * 6 4 3 29 29 H 1.48502 * 109.99925 * 181.31722 * 6 4 3 30 30 H 0.97005 * 119.99890 * 359.97438 * 9 8 7 31 31 H 1.09003 * 109.47040 * 300.00305 * 12 10 9 32 32 H 1.08992 * 109.47351 * 60.00204 * 12 10 9 33 33 H 1.09004 * 109.47323 * 60.00428 * 13 12 10 34 34 H 1.09009 * 109.47185 * 179.97438 * 13 12 10 35 35 H 0.97002 * 119.99396 * 335.00414 * 16 14 13 36 36 H 0.97001 * 120.00248 * 359.97438 * 18 17 16 37 37 H 0.97006 * 120.00125 * 179.97438 * 18 17 16 38 38 H 1.09002 * 109.47308 * 59.99917 * 20 14 13 39 39 H 1.09000 * 109.47629 * 180.02562 * 20 14 13 40 40 H 1.09002 * 109.47071 * 299.99184 * 21 10 9 41 41 H 1.08997 * 109.47507 * 59.99756 * 21 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2898 1.0792 0.0000 4 6 1.7415 2.4830 0.0006 5 8 0.4840 2.5034 -0.6781 6 14 2.9359 3.6166 -0.8707 7 7 3.5851 0.8187 0.0052 8 6 3.9315 -0.4310 0.0045 9 7 5.2384 -0.8927 0.0098 10 6 5.5066 -2.3330 0.0090 11 1 4.7481 -2.8434 -0.5846 12 6 6.8879 -2.5943 -0.5946 13 6 7.1676 -4.0985 -0.5961 14 6 7.1306 -4.6255 0.8397 15 1 7.8890 -4.1155 1.4337 16 7 7.3979 -6.0659 0.8384 17 6 7.9083 -6.6576 1.9364 18 7 8.1547 -7.9827 1.9349 19 8 8.1467 -5.9960 2.9284 20 6 5.7492 -4.3642 1.4435 21 6 5.4697 -2.8594 1.4451 22 16 2.5413 -1.4262 -0.0026 23 1 -0.3634 0.0000 -1.0276 24 1 -0.3633 -0.8900 0.5139 25 1 -0.3633 0.8900 0.5139 26 1 1.6051 2.8194 1.0283 27 1 0.0717 3.3772 -0.7159 28 1 3.1302 3.1686 -2.2731 29 1 2.4217 5.0096 -0.8492 30 1 5.9755 -0.2622 0.0141 31 1 6.9141 -2.2192 -1.6178 32 1 7.6463 -2.0839 -0.0010 33 1 6.4092 -4.6085 -1.1900 34 1 8.1516 -4.2847 -1.0266 35 1 7.2074 -6.5937 0.0471 36 1 7.9642 -8.5105 1.1437 37 1 8.5225 -8.4085 2.7251 38 1 4.9907 -4.8743 0.8496 39 1 5.7229 -4.7393 2.4666 40 1 6.2281 -2.3490 2.0388 41 1 4.4856 -2.6733 1.8752 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_17567490_15704122.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:00:15 Heat of formation + Delta-G solvation = -20.408461 kcal Electronic energy + Delta-G solvation = -23899.393356 eV Core-core repulsion = 20328.115223 eV Total energy + Delta-G solvation = -3571.278132 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 313.125 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -41.26685 -40.84198 -39.71675 -37.80807 -36.55975 -34.83783 -33.97860 -32.49080 -32.03307 -29.80407 -28.48818 -25.51790 -24.51311 -24.04101 -23.24740 -21.93122 -21.51668 -20.14897 -19.24848 -19.14624 -18.37641 -18.19028 -17.21408 -16.92079 -16.32081 -16.26269 -16.12830 -15.69952 -15.58100 -15.31004 -15.17688 -14.85789 -14.26468 -13.99214 -13.96780 -13.78028 -13.64625 -13.41365 -13.29644 -12.86737 -12.72311 -12.70371 -12.34300 -12.15396 -11.73303 -11.72584 -11.53559 -11.25305 -11.00678 -10.66841 -10.51927 -10.33838 -10.04214 -9.88412 -8.51403 -4.63932 0.14621 0.26933 0.88731 1.42023 1.77003 1.80302 1.96428 2.03796 2.19897 2.24822 3.09768 3.38804 3.43572 3.48288 3.82443 3.88698 3.95091 3.99354 4.12264 4.23118 4.26486 4.27943 4.44894 4.47943 4.49370 4.56804 4.75369 4.82681 4.90545 4.92437 4.98340 5.04163 5.11472 5.17951 5.24067 5.41313 5.47979 5.67539 5.70974 5.94051 6.34683 6.49550 6.94370 7.02598 7.65119 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 C -0.232 4.232 3 C 0.106 3.894 4 C -0.042 4.042 5 O -0.535 6.535 6 Si 0.718 3.282 7 N -0.540 5.540 8 C 0.323 3.677 9 N -0.690 5.690 10 C 0.151 3.849 11 H 0.083 0.917 12 C -0.120 4.120 13 C -0.123 4.123 14 C 0.160 3.840 15 H 0.092 0.908 16 N -0.743 5.743 17 C 0.705 3.295 18 N -0.868 5.868 19 O -0.592 6.592 20 C -0.127 4.127 21 C -0.134 4.134 22 S 0.096 5.904 23 H 0.070 0.930 24 H 0.056 0.944 25 H 0.085 0.915 26 H 0.082 0.918 27 H 0.381 0.619 28 H -0.263 1.263 29 H -0.265 1.265 30 H 0.413 0.587 31 H 0.080 0.920 32 H 0.079 0.921 33 H 0.073 0.927 34 H 0.079 0.921 35 H 0.396 0.604 36 H 0.397 0.603 37 H 0.416 0.584 38 H 0.067 0.933 39 H 0.076 0.924 40 H 0.076 0.924 41 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.987 -3.766 -2.275 4.509 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.116 4.116 2 C -0.355 4.355 3 C -0.024 4.024 4 C -0.154 4.154 5 O -0.342 6.342 6 Si 0.619 3.381 7 N -0.267 5.267 8 C -0.048 4.048 9 N -0.331 5.331 10 C 0.046 3.954 11 H 0.101 0.899 12 C -0.159 4.159 13 C -0.161 4.161 14 C 0.055 3.945 15 H 0.110 0.890 16 N -0.398 5.398 17 C 0.403 3.597 18 N -0.436 5.436 19 O -0.470 6.470 20 C -0.167 4.167 21 C -0.174 4.174 22 S 0.345 5.655 23 H 0.089 0.911 24 H 0.075 0.925 25 H 0.103 0.897 26 H 0.099 0.901 27 H 0.230 0.770 28 H -0.188 1.188 29 H -0.191 1.191 30 H 0.251 0.749 31 H 0.099 0.901 32 H 0.097 0.903 33 H 0.092 0.908 34 H 0.098 0.902 35 H 0.230 0.770 36 H 0.225 0.775 37 H 0.248 0.752 38 H 0.085 0.915 39 H 0.095 0.905 40 H 0.094 0.906 41 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges 1.673 -4.011 -2.250 4.894 hybrid contribution -1.132 0.501 -0.507 1.338 sum 0.541 -3.510 -2.757 4.496 Atomic orbital electron populations 1.20080 0.86559 1.02328 1.02633 1.25099 1.01358 0.92697 1.16330 1.18741 0.86558 0.94897 1.02166 1.23992 0.92252 0.97860 1.01342 1.86577 1.33367 1.35028 1.79187 0.93667 0.87387 0.74957 0.82095 1.65598 1.16766 1.16614 1.27727 1.23173 0.91848 0.91173 0.98597 1.44005 1.01716 1.06914 1.80427 1.21210 0.98298 0.78935 0.97001 0.89933 1.21697 0.95570 0.96322 1.02308 1.21752 1.03251 0.95204 0.95922 1.20898 0.97562 0.79399 0.96622 0.88957 1.45160 1.69416 1.09697 1.15541 1.15995 0.77946 0.82222 0.83543 1.43030 1.72216 1.07723 1.20656 1.90999 1.59179 1.63430 1.33346 1.21927 0.96729 0.95451 1.02586 1.22038 1.03325 0.95714 0.96306 1.83945 0.96608 1.10635 1.74341 0.91129 0.92473 0.89656 0.90051 0.77020 1.18769 1.19106 0.74853 0.90110 0.90276 0.90826 0.90226 0.76983 0.77544 0.75200 0.91459 0.90544 0.90566 0.90953 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 -0.10 8.96 36.01 0.32 0.22 16 2 C -0.23 -0.77 6.50 -36.02 -0.23 -1.00 16 3 C 0.11 0.39 5.95 -84.18 -0.50 -0.11 16 4 C -0.04 -0.07 2.81 36.01 0.10 0.03 16 5 O -0.53 -0.63 9.88 -35.23 -0.35 -0.98 16 6 Si 0.72 1.18 32.09 -169.99 -5.45 -4.27 16 7 N -0.54 -1.96 8.95 -11.36 -0.10 -2.06 16 8 C 0.32 0.69 8.22 -87.69 -0.72 -0.03 16 9 N -0.69 0.40 5.23 -55.79 -0.29 0.11 16 10 C 0.15 -0.33 2.40 -67.93 -0.16 -0.49 16 11 H 0.08 -0.16 7.26 -51.93 -0.38 -0.54 16 12 C -0.12 0.44 5.39 -26.74 -0.14 0.29 16 13 C -0.12 0.48 5.39 -26.74 -0.14 0.34 16 14 C 0.16 -0.27 2.45 -67.93 -0.17 -0.44 16 15 H 0.09 0.05 7.58 -51.93 -0.39 -0.35 16 16 N -0.74 1.45 5.08 -58.68 -0.30 1.15 16 17 C 0.70 0.81 8.80 -86.92 -0.77 0.05 16 18 N -0.87 2.13 8.88 27.63 0.25 2.38 16 19 O -0.59 -3.65 16.84 5.28 0.09 -3.56 16 20 C -0.13 0.16 5.50 -26.70 -0.15 0.02 16 21 C -0.13 0.19 5.51 -26.70 -0.15 0.04 16 22 S 0.10 0.17 21.68 -107.50 -2.33 -2.17 16 23 H 0.07 0.14 8.14 -51.93 -0.42 -0.28 16 24 H 0.06 0.04 8.14 -51.93 -0.42 -0.38 16 25 H 0.08 0.13 6.63 -51.93 -0.34 -0.21 16 26 H 0.08 0.01 7.96 -51.93 -0.41 -0.41 16 27 H 0.38 -1.10 8.74 45.56 0.40 -0.70 16 28 H -0.26 -1.46 7.11 56.52 0.40 -1.06 16 29 H -0.27 -0.68 7.11 56.52 0.40 -0.28 16 30 H 0.41 -0.64 8.73 -40.82 -0.36 -1.00 16 31 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 32 H 0.08 -0.29 8.14 -51.93 -0.42 -0.72 16 33 H 0.07 -0.34 8.14 -51.93 -0.42 -0.77 16 34 H 0.08 -0.33 8.14 -51.92 -0.42 -0.75 16 35 H 0.40 -1.90 8.62 -40.82 -0.35 -2.25 16 36 H 0.40 -2.21 8.84 -40.82 -0.36 -2.57 16 37 H 0.42 -1.12 8.93 -40.82 -0.36 -1.48 16 38 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 39 H 0.08 0.09 8.14 -51.93 -0.42 -0.34 16 40 H 0.08 -0.06 8.14 -51.93 -0.42 -0.49 16 41 H 0.07 -0.02 8.04 -51.93 -0.42 -0.44 16 LS Contribution 345.32 15.07 5.20 5.20 Total: 0.00 -9.60 345.32 -11.98 -21.58 By element: Atomic # 1 Polarization: -10.32 SS G_CDS: -5.98 Total: -16.30 kcal Atomic # 6 Polarization: 1.62 SS G_CDS: -2.71 Total: -1.09 kcal Atomic # 7 Polarization: 2.02 SS G_CDS: -0.45 Total: 1.58 kcal Atomic # 8 Polarization: -4.28 SS G_CDS: -0.26 Total: -4.54 kcal Atomic # 14 Polarization: 1.18 SS G_CDS: -5.45 Total: -4.27 kcal Atomic # 16 Polarization: 0.17 SS G_CDS: -2.33 Total: -2.17 kcal Total LS contribution 5.20 Total: 5.20 kcal Total: -9.60 -11.98 -21.58 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17567490_15704122.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 1.172 kcal (2) G-P(sol) polarization free energy of solvation -9.602 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -8.431 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.978 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.580 kcal (6) G-S(sol) free energy of system = (1) + (5) -20.408 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds