Wall clock time and date at job start Mon Mar 8 2021 06:00:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34774 * 1 3 3 O 1.21592 * 119.99715 * 2 1 4 4 N 1.34775 * 120.00155 * 179.97438 * 2 1 3 5 5 C 1.46500 * 119.99814 * 179.97438 * 4 2 1 6 6 H 1.08993 * 109.47513 * 325.00073 * 5 4 2 7 7 C 1.53000 * 109.46775 * 85.00548 * 5 4 2 8 8 C 1.53003 * 109.46948 * 179.97438 * 7 5 4 9 9 C 1.53001 * 109.47334 * 299.99927 * 8 7 5 10 10 H 1.09006 * 109.46898 * 300.00077 * 9 8 7 11 11 N 1.46494 * 109.47513 * 180.02562 * 9 8 7 12 12 C 1.39140 * 120.00119 * 84.99357 * 11 9 8 13 13 N 1.32331 * 119.71745 * 359.97438 * 12 11 9 14 14 C 1.32016 * 121.64557 * 180.02562 * 13 12 11 15 15 C 1.37979 * 120.90322 * 359.97438 * 14 13 12 16 16 C 1.50700 * 120.33027 * 179.97438 * 15 14 13 17 17 O 1.42903 * 109.46831 * 120.00385 * 16 15 14 18 18 Si 1.86296 * 109.46899 * 0.02562 * 16 15 14 19 19 C 1.38907 * 119.34592 * 359.77085 * 15 14 13 20 20 C 1.38452 * 118.48172 * 0.49369 * 19 15 14 21 21 F 1.35104 * 120.46982 * 179.75500 * 20 19 15 22 22 C 1.53005 * 109.47146 * 59.99490 * 9 8 7 23 23 C 1.52994 * 109.47247 * 300.00367 * 22 9 8 24 24 H 0.97003 * 120.00515 * 180.02562 * 1 2 3 25 25 H 0.97003 * 120.00382 * 359.97438 * 1 2 3 26 26 H 0.96998 * 119.99506 * 0.02562 * 4 2 1 27 27 H 1.09003 * 109.47081 * 299.98991 * 7 5 4 28 28 H 1.08993 * 109.47488 * 59.99510 * 7 5 4 29 29 H 1.09001 * 109.47374 * 179.97438 * 8 7 5 30 30 H 1.09006 * 109.47191 * 59.99825 * 8 7 5 31 31 H 0.97005 * 119.99697 * 265.00430 * 11 9 8 32 32 H 1.08004 * 119.55006 * 180.02562 * 14 13 12 33 33 H 1.08994 * 109.47283 * 240.00689 * 16 15 14 34 34 H 0.96698 * 113.99580 * 300.00126 * 17 16 15 35 35 H 1.48501 * 110.00021 * 179.97438 * 18 16 15 36 36 H 1.48507 * 110.00127 * 301.31868 * 18 16 15 37 37 H 1.08001 * 120.76394 * 180.25229 * 19 15 14 38 38 H 1.08998 * 109.46587 * 60.00234 * 22 9 8 39 39 H 1.08998 * 109.46949 * 179.97438 * 22 9 8 40 40 H 1.09001 * 109.47201 * 179.97438 * 23 22 9 41 41 H 1.09001 * 109.47447 * 300.00212 * 23 22 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3477 0.0000 0.0000 3 8 1.9557 1.0531 0.0000 4 7 2.0216 -1.1672 0.0005 5 6 3.4866 -1.1671 0.0000 6 1 3.8497 -0.3257 -0.5901 7 6 3.9971 -1.0405 1.4367 8 6 5.5271 -1.0410 1.4362 9 6 6.0365 -2.3490 0.8274 10 1 5.6730 -3.1903 1.4176 11 7 7.5015 -2.3498 0.8275 12 6 8.1969 -2.7616 1.9601 13 7 7.5294 -3.1508 3.0344 14 6 8.1503 -3.5483 4.1294 15 6 9.5284 -3.5728 4.1934 16 6 10.2240 -4.0284 5.4502 17 8 11.0404 -5.1642 5.1578 18 14 8.9524 -4.4914 6.7306 19 6 10.2684 -3.1774 3.0863 20 6 9.5903 -2.7601 1.9537 21 9 10.2700 -2.3623 0.8559 22 6 5.5259 -2.4757 -0.6094 23 6 3.9960 -2.4752 -0.6088 24 1 -0.4851 -0.8400 0.0004 25 1 -0.4851 0.8400 0.0004 26 1 1.5366 -2.0072 0.0005 27 1 3.6340 -0.1088 1.8706 28 1 3.6340 -1.8819 2.0268 29 1 5.8909 -0.9504 2.4597 30 1 5.8906 -0.1998 0.8460 31 1 7.9867 -2.0632 0.0379 32 1 7.5718 -3.8593 4.9868 33 1 10.8482 -3.2211 5.8331 34 1 10.5499 -5.9225 4.8121 35 1 9.6255 -4.9430 7.9748 36 1 8.0762 -3.3278 7.0202 37 1 11.3481 -3.1915 3.1098 38 1 5.8894 -1.6345 -1.1995 39 1 5.8892 -3.4073 -1.0432 40 1 3.6322 -2.5650 -1.6324 41 1 3.6325 -3.3164 -0.0186 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_17567490_17656566.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:00:19 Heat of formation + Delta-G solvation = -70.331800 kcal Electronic energy + Delta-G solvation = -25810.066848 eV Core-core repulsion = 21833.555275 eV Total energy + Delta-G solvation = -3976.511574 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 311.143 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -49.83935 -41.51191 -41.03452 -39.56137 -37.99695 -36.47793 -34.82236 -34.00272 -33.14429 -31.90256 -31.51061 -29.03959 -26.39953 -25.06992 -23.90112 -23.39595 -22.68469 -21.80086 -21.24500 -19.45841 -19.00688 -18.50042 -18.32956 -18.26308 -17.55907 -16.93451 -16.66515 -16.21619 -16.09007 -16.01639 -15.95698 -15.52893 -15.36135 -15.16395 -14.97200 -14.48528 -14.35160 -14.22830 -13.88794 -13.70006 -13.42187 -13.27514 -12.73270 -12.60769 -12.51782 -12.22758 -12.07581 -11.75724 -11.52602 -11.23031 -11.10480 -10.67965 -10.63877 -10.61867 -10.44742 -9.98058 -8.74284 -5.09813 -0.04778 0.14490 1.22428 1.57353 1.84195 1.92912 2.02735 2.28623 2.57920 3.06560 3.26451 3.41208 3.48334 3.56887 3.59171 3.60031 3.85172 3.96134 3.98955 4.05499 4.13603 4.33620 4.36310 4.39602 4.41955 4.48164 4.64556 4.67601 4.74141 4.88864 4.95120 4.98935 4.99440 5.19696 5.21417 5.29923 5.44918 5.54271 5.75181 5.97039 5.97840 6.19276 6.52105 6.97392 6.98491 7.68810 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.869 5.869 2 C 0.705 3.295 3 O -0.593 6.593 4 N -0.742 5.742 5 C 0.161 3.839 6 H 0.090 0.910 7 C -0.125 4.125 8 C -0.126 4.126 9 C 0.156 3.844 10 H 0.095 0.905 11 N -0.714 5.714 12 C 0.393 3.607 13 N -0.511 5.511 14 C 0.147 3.853 15 C -0.211 4.211 16 C -0.055 4.055 17 O -0.541 6.541 18 Si 0.686 3.314 19 C -0.038 4.038 20 C -0.021 4.021 21 F -0.134 7.134 22 C -0.125 4.125 23 C -0.121 4.121 24 H 0.397 0.603 25 H 0.415 0.585 26 H 0.396 0.604 27 H 0.071 0.929 28 H 0.067 0.933 29 H 0.072 0.928 30 H 0.065 0.935 31 H 0.412 0.588 32 H 0.162 0.838 33 H 0.115 0.885 34 H 0.379 0.621 35 H -0.252 1.252 36 H -0.254 1.254 37 H 0.149 0.851 38 H 0.072 0.928 39 H 0.076 0.924 40 H 0.076 0.924 41 H 0.073 0.927 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.402 -5.782 -0.896 7.322 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.437 5.437 2 C 0.403 3.597 3 O -0.470 6.470 4 N -0.398 5.398 5 C 0.056 3.944 6 H 0.108 0.892 7 C -0.165 4.165 8 C -0.165 4.165 9 C 0.051 3.949 10 H 0.113 0.887 11 N -0.346 5.346 12 C 0.154 3.846 13 N -0.227 5.227 14 C -0.010 4.010 15 C -0.216 4.216 16 C -0.166 4.166 17 O -0.346 6.346 18 Si 0.587 3.413 19 C -0.064 4.064 20 C -0.048 4.048 21 F -0.113 7.113 22 C -0.163 4.163 23 C -0.159 4.159 24 H 0.224 0.776 25 H 0.248 0.752 26 H 0.230 0.770 27 H 0.090 0.910 28 H 0.086 0.914 29 H 0.090 0.910 30 H 0.083 0.917 31 H 0.249 0.751 32 H 0.179 0.821 33 H 0.133 0.867 34 H 0.227 0.773 35 H -0.176 1.176 36 H -0.179 1.179 37 H 0.167 0.833 38 H 0.091 0.909 39 H 0.095 0.905 40 H 0.094 0.906 41 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges -4.676 -4.380 0.040 6.407 hybrid contribution 0.903 0.250 -0.750 1.201 sum -3.773 -4.130 -0.710 5.639 Atomic orbital electron populations 1.43029 1.05457 1.12666 1.82506 1.16000 0.82071 0.84319 0.77338 1.90995 1.67794 1.30424 1.57835 1.45170 1.07202 1.07100 1.80289 1.20905 0.77877 0.98818 0.96850 0.89213 1.21888 0.95026 1.03021 0.96557 1.21901 0.95015 0.97505 1.02127 1.21026 0.78245 0.98995 0.96586 0.88747 1.44674 1.06353 1.70584 1.12943 1.18421 0.86279 0.91466 0.88429 1.67303 1.38747 1.17409 0.99289 1.22336 0.91017 0.93116 0.94549 1.20919 0.94542 1.08242 0.97934 1.24853 1.01403 0.90966 0.99402 1.86511 1.37004 1.23783 1.87281 0.94859 0.80248 0.87277 0.78898 1.21272 1.01527 0.93354 0.90232 1.18016 0.88964 1.11179 0.86604 1.91494 1.79600 1.89028 1.51144 1.21753 0.95238 1.03309 0.96033 1.21725 0.95138 0.97131 1.01934 0.77556 0.75243 0.77011 0.90990 0.91419 0.90960 0.91670 0.75142 0.82122 0.86741 0.77313 1.17627 1.17865 0.83342 0.90923 0.90499 0.90554 0.90812 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.87 1.72 8.88 27.63 0.25 1.96 16 2 C 0.70 1.26 8.80 -86.92 -0.77 0.50 16 3 O -0.59 -4.07 16.84 5.28 0.09 -3.98 16 4 N -0.74 0.91 5.08 -58.67 -0.30 0.61 16 5 C 0.16 -0.12 2.45 -67.93 -0.17 -0.29 16 6 H 0.09 0.14 7.58 -51.93 -0.39 -0.25 16 7 C -0.13 0.01 5.49 -26.73 -0.15 -0.13 16 8 C -0.13 0.00 5.51 -26.73 -0.15 -0.14 16 9 C 0.16 -0.18 2.47 -67.93 -0.17 -0.35 16 10 H 0.09 -0.04 7.54 -51.93 -0.39 -0.43 16 11 N -0.71 0.17 5.23 -53.85 -0.28 -0.11 16 12 C 0.39 0.53 7.47 -154.87 -1.16 -0.63 16 13 N -0.51 -0.64 9.20 -12.37 -0.11 -0.76 16 14 C 0.15 -0.04 9.84 -17.57 -0.17 -0.21 16 15 C -0.21 0.07 5.40 -104.47 -0.56 -0.49 16 16 C -0.05 0.06 2.84 36.01 0.10 0.16 16 17 O -0.54 0.31 12.77 -35.23 -0.45 -0.14 16 18 Si 0.69 -1.36 29.82 -169.99 -5.07 -6.43 16 19 C -0.04 -0.03 9.75 -39.25 -0.38 -0.41 16 20 C -0.02 -0.03 7.35 -39.09 -0.29 -0.32 16 21 F -0.13 -0.31 16.65 2.25 0.04 -0.27 16 22 C -0.12 0.33 5.39 -26.73 -0.14 0.19 16 23 C -0.12 0.37 5.39 -26.73 -0.14 0.22 16 24 H 0.40 -2.05 8.84 -40.82 -0.36 -2.41 16 25 H 0.42 -0.94 8.93 -40.82 -0.36 -1.30 16 26 H 0.40 -1.65 8.62 -40.82 -0.35 -2.00 16 27 H 0.07 0.17 8.14 -51.93 -0.42 -0.25 16 28 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 29 H 0.07 0.11 8.14 -51.93 -0.42 -0.31 16 30 H 0.06 0.04 8.14 -51.93 -0.42 -0.38 16 31 H 0.41 -0.47 8.08 -40.82 -0.33 -0.80 16 32 H 0.16 -0.40 4.88 -52.48 -0.26 -0.65 16 33 H 0.12 -0.08 7.96 -51.93 -0.41 -0.49 16 34 H 0.38 -1.67 8.70 45.56 0.40 -1.28 16 35 H -0.25 -0.35 7.11 56.52 0.40 0.05 16 36 H -0.25 -0.07 7.11 56.52 0.40 0.34 16 37 H 0.15 0.00 8.06 -52.49 -0.42 -0.43 16 38 H 0.07 -0.18 8.14 -51.93 -0.42 -0.61 16 39 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 40 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 41 H 0.07 -0.28 8.14 -51.93 -0.42 -0.71 16 LS Contribution 341.14 15.07 5.14 5.14 Total: 0.00 -9.28 341.14 -10.31 -19.59 By element: Atomic # 1 Polarization: -8.25 SS G_CDS: -5.47 Total: -13.72 kcal Atomic # 6 Polarization: 2.24 SS G_CDS: -4.14 Total: -1.91 kcal Atomic # 7 Polarization: 2.16 SS G_CDS: -0.45 Total: 1.71 kcal Atomic # 8 Polarization: -3.75 SS G_CDS: -0.36 Total: -4.12 kcal Atomic # 9 Polarization: -0.31 SS G_CDS: 0.04 Total: -0.27 kcal Atomic # 14 Polarization: -1.36 SS G_CDS: -5.07 Total: -6.43 kcal Total LS contribution 5.14 Total: 5.14 kcal Total: -9.28 -10.31 -19.59 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17567490_17656566.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -50.746 kcal (2) G-P(sol) polarization free energy of solvation -9.276 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -60.023 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.309 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.585 kcal (6) G-S(sol) free energy of system = (1) + (5) -70.332 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds