Wall clock time and date at job start Mon Mar 8 2021 08:03:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.52999 * 109.46774 * 2 1 4 4 C 1.52997 * 109.47061 * 240.00154 * 2 1 3 5 5 O 1.45203 * 109.47240 * 120.00045 * 2 1 3 6 6 C 1.34229 * 116.99579 * 59.99972 * 5 2 1 7 7 O 1.20825 * 120.00650 * 359.97438 * 6 5 2 8 8 C 1.50703 * 119.99682 * 180.02562 * 6 5 2 9 9 H 1.09002 * 109.47152 * 300.00157 * 8 6 5 10 10 C 1.53002 * 109.47292 * 60.00212 * 8 6 5 11 11 C 1.53001 * 109.46963 * 180.02562 * 10 8 6 12 12 C 1.53000 * 109.46886 * 299.99499 * 11 10 8 13 13 H 1.09002 * 109.47398 * 300.00496 * 12 11 10 14 14 N 1.46499 * 109.46840 * 180.02562 * 12 11 10 15 15 C 1.38413 * 119.99819 * 85.00516 * 14 12 11 16 16 N 1.32485 * 119.21615 * 359.72892 * 15 14 12 17 17 C 1.32278 * 120.73816 * 179.72076 * 16 15 14 18 18 C 1.38602 * 119.19924 * 0.54292 * 17 16 15 19 19 C 1.50697 * 120.72519 * 179.70871 * 18 17 16 20 20 O 1.42896 * 109.47287 * 245.02557 * 19 18 17 21 21 Si 1.86310 * 109.47053 * 5.02239 * 19 18 17 22 22 C 1.38603 * 118.55591 * 359.73225 * 18 17 16 23 23 N 1.32275 * 119.19921 * 359.97438 * 22 18 17 24 24 C 1.53002 * 109.47233 * 60.00670 * 12 11 10 25 25 C 1.52997 * 109.47084 * 180.02562 * 8 6 5 26 26 H 1.09000 * 109.47115 * 299.99735 * 1 2 3 27 27 H 1.08998 * 109.47349 * 59.99945 * 1 2 3 28 28 H 1.09001 * 109.47077 * 179.97438 * 1 2 3 29 29 H 1.09003 * 109.46656 * 179.97438 * 3 2 1 30 30 H 1.08994 * 109.47463 * 299.99669 * 3 2 1 31 31 H 1.09000 * 109.47083 * 60.00246 * 3 2 1 32 32 H 1.09001 * 109.47231 * 299.99975 * 4 2 1 33 33 H 1.08998 * 109.47120 * 59.99760 * 4 2 1 34 34 H 1.09003 * 109.47003 * 179.97438 * 4 2 1 35 35 H 1.09000 * 109.46497 * 300.00140 * 10 8 6 36 36 H 1.09002 * 109.47067 * 59.99892 * 10 8 6 37 37 H 1.09001 * 109.46652 * 179.97438 * 11 10 8 38 38 H 1.08992 * 109.47514 * 59.99933 * 11 10 8 39 39 H 0.97002 * 120.00410 * 264.99761 * 14 12 11 40 40 H 1.08004 * 120.40174 * 180.29325 * 17 16 15 41 41 H 1.08998 * 109.47058 * 125.02079 * 19 18 17 42 42 H 0.96697 * 114.00563 * 59.99566 * 20 19 18 43 43 H 1.48493 * 110.00044 * 180.02562 * 21 19 18 44 44 H 1.48507 * 109.99758 * 301.32017 * 21 19 18 45 45 H 1.07995 * 120.40179 * 179.97438 * 22 18 17 46 46 H 1.09002 * 109.47075 * 59.99068 * 24 12 11 47 47 H 1.08996 * 109.47407 * 180.02562 * 24 12 11 48 48 H 1.09001 * 109.47375 * 60.00042 * 25 8 6 49 49 H 1.09002 * 109.47497 * 299.99683 * 25 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2492 5 8 2.0140 -0.6845 1.1856 6 6 1.6533 -1.9684 1.3378 7 8 0.9559 -2.5025 0.5082 8 6 2.1173 -2.7435 2.5441 9 1 3.2069 -2.7723 2.5604 10 6 1.6061 -2.0627 3.8153 11 6 2.0777 -2.8492 5.0400 12 6 1.5312 -4.2766 4.9708 13 1 0.4417 -4.2482 4.9547 14 7 1.9823 -5.0296 6.1438 15 6 1.2708 -4.9563 7.3288 16 7 0.1872 -4.1963 7.3865 17 6 -0.5185 -4.1086 8.5019 18 6 -0.1052 -4.8146 9.6207 19 6 -0.8795 -4.7345 10.9111 20 8 -0.0726 -4.1123 11.9129 21 14 -2.4255 -3.7291 10.6462 22 6 1.0360 -5.5956 9.5271 23 7 1.6925 -5.6441 8.3798 24 6 2.0425 -4.9575 3.6996 25 6 1.5709 -4.1708 2.4743 26 1 -0.3633 0.5138 0.8900 27 1 -0.3634 0.5138 -0.8899 28 1 -0.3633 -1.0277 -0.0005 29 1 3.1299 1.4425 0.0005 30 1 1.6766 1.9563 -0.8899 31 1 1.6766 1.9563 0.8900 32 1 1.6766 -1.7489 -1.2493 33 1 1.6766 -0.2074 -2.1392 34 1 3.1300 -0.7208 -1.2495 35 1 1.9957 -1.0459 3.8647 36 1 0.5165 -2.0339 3.7990 37 1 1.7138 -2.3639 5.9457 38 1 3.1671 -2.8777 5.0561 39 1 2.7796 -5.5795 6.0900 40 1 -1.4037 -3.4911 8.5415 41 1 -1.1506 -5.7393 11.2351 42 1 0.2062 -3.2133 11.6912 43 1 -3.1978 -3.6421 11.9116 44 1 -2.0707 -2.3668 10.1735 45 1 1.3850 -6.1578 10.3806 46 1 3.1320 -4.9858 3.7157 47 1 1.6528 -5.9742 3.6501 48 1 1.9355 -4.6556 1.5687 49 1 0.4814 -4.1425 2.4578 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_17607844_12175864.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:03:02 Heat of formation + Delta-G solvation = -69.923820 kcal Electronic energy + Delta-G solvation = -29555.103348 eV Core-core repulsion = 25483.731922 eV Total energy + Delta-G solvation = -4071.371426 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.188 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -42.14754 -41.92248 -39.92339 -38.26485 -37.82491 -36.09771 -34.98983 -34.67334 -32.84349 -31.92702 -30.52945 -28.36204 -28.35311 -26.76821 -25.92364 -24.92756 -23.86069 -23.21696 -22.33911 -21.18413 -20.43926 -19.35223 -18.71855 -18.17679 -18.15944 -17.51496 -17.09132 -16.57538 -16.56623 -16.12822 -15.85935 -15.77429 -15.54811 -15.41818 -15.20837 -14.82517 -14.65288 -14.60030 -14.18205 -13.98670 -13.75154 -13.48118 -13.34594 -13.19868 -13.14687 -12.92451 -12.87105 -12.68935 -12.60283 -12.33798 -12.28621 -12.20175 -12.05075 -11.86930 -11.83304 -11.72167 -11.45651 -11.33279 -11.11205 -10.80747 -10.71387 -9.99819 -9.10693 -5.03129 0.08176 0.18171 1.21507 1.27483 1.51038 1.66389 1.82043 1.90841 2.83569 3.15061 3.31982 3.44256 3.49654 3.54404 3.63354 3.72043 3.72948 3.78157 3.79210 3.88646 3.93904 4.00952 4.12667 4.18295 4.22358 4.27262 4.33803 4.53220 4.54003 4.57227 4.58460 4.65648 4.74217 4.75969 4.78232 4.84524 4.86671 4.89753 4.93897 5.01293 5.05447 5.06174 5.15534 5.19076 5.28213 5.30536 5.33131 5.61953 5.79603 6.02852 6.34041 6.42119 6.89113 7.31520 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.183 4.183 2 C 0.116 3.884 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.350 6.350 6 C 0.468 3.532 7 O -0.501 6.501 8 C -0.083 4.083 9 H 0.109 0.891 10 C -0.106 4.106 11 C -0.127 4.127 12 C 0.158 3.842 13 H 0.096 0.904 14 N -0.692 5.692 15 C 0.569 3.431 16 N -0.561 5.561 17 C 0.197 3.803 18 C -0.293 4.293 19 C -0.053 4.053 20 O -0.530 6.530 21 Si 0.679 3.321 22 C 0.224 3.776 23 N -0.570 5.570 24 C -0.127 4.127 25 C -0.098 4.098 26 H 0.062 0.938 27 H 0.072 0.928 28 H 0.083 0.917 29 H 0.067 0.933 30 H 0.079 0.921 31 H 0.067 0.933 32 H 0.083 0.917 33 H 0.072 0.928 34 H 0.061 0.939 35 H 0.080 0.920 36 H 0.073 0.927 37 H 0.074 0.926 38 H 0.067 0.933 39 H 0.414 0.586 40 H 0.166 0.834 41 H 0.120 0.880 42 H 0.376 0.624 43 H -0.253 1.253 44 H -0.258 1.258 45 H 0.170 0.830 46 H 0.072 0.928 47 H 0.078 0.922 48 H 0.080 0.920 49 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.274 0.852 -1.083 1.405 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.240 4.240 2 C 0.081 3.919 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.267 6.267 6 C 0.311 3.689 7 O -0.388 6.388 8 C -0.102 4.102 9 H 0.127 0.873 10 C -0.144 4.144 11 C -0.166 4.166 12 C 0.053 3.947 13 H 0.114 0.886 14 N -0.327 5.327 15 C 0.212 3.788 16 N -0.283 5.283 17 C 0.030 3.970 18 C -0.301 4.301 19 C -0.164 4.164 20 O -0.336 6.336 21 Si 0.580 3.420 22 C 0.055 3.945 23 N -0.291 5.291 24 C -0.165 4.165 25 C -0.136 4.136 26 H 0.081 0.919 27 H 0.091 0.909 28 H 0.102 0.898 29 H 0.086 0.914 30 H 0.098 0.902 31 H 0.086 0.914 32 H 0.102 0.898 33 H 0.091 0.909 34 H 0.080 0.920 35 H 0.099 0.901 36 H 0.091 0.909 37 H 0.093 0.907 38 H 0.086 0.914 39 H 0.252 0.748 40 H 0.183 0.817 41 H 0.138 0.862 42 H 0.223 0.777 43 H -0.178 1.178 44 H -0.182 1.182 45 H 0.187 0.813 46 H 0.091 0.909 47 H 0.097 0.903 48 H 0.098 0.902 49 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges -0.564 0.922 -1.896 2.182 hybrid contribution 0.840 0.533 0.994 1.406 sum 0.276 1.455 -0.902 1.734 Atomic orbital electron populations 1.22493 0.93882 1.04738 1.02936 1.22218 0.94483 0.92336 0.82900 1.21866 1.02288 0.92500 1.03249 1.22495 1.01707 1.03116 0.96751 1.86551 1.69680 1.25305 1.45183 1.23589 0.77350 0.80702 0.87239 1.90594 1.35001 1.69939 1.43293 1.21196 1.03041 0.94774 0.91214 0.87312 1.21474 1.01813 0.99537 0.91595 1.21942 1.01191 0.95171 0.98260 1.21060 1.00636 0.90199 0.82814 0.88612 1.44277 1.29697 1.51461 1.07272 1.19402 0.86324 0.86341 0.86701 1.67941 1.08556 1.23184 1.28620 1.22842 0.95589 0.91942 0.86675 1.21633 1.02752 1.06785 0.98963 1.24664 1.00871 1.04666 0.86204 1.86612 1.70089 1.32968 1.43926 0.95180 0.79727 0.81292 0.85802 1.22836 0.87923 0.90226 0.93481 1.67996 1.34824 1.26025 1.00277 1.21839 1.01783 0.99852 0.93031 1.21375 1.02182 0.92009 0.98049 0.91931 0.90912 0.89815 0.91420 0.90199 0.91399 0.89829 0.90887 0.91976 0.90112 0.90862 0.90730 0.91418 0.74848 0.81734 0.86234 0.77685 1.17790 1.18249 0.81327 0.90895 0.90313 0.90182 0.90361 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.15 8.37 37.16 0.31 0.16 16 2 C 0.12 0.10 1.13 -90.62 -0.10 0.00 16 3 C -0.14 0.12 8.85 37.16 0.33 0.45 16 4 C -0.18 -0.15 8.37 37.16 0.31 0.16 16 5 O -0.35 -0.57 9.79 -39.25 -0.38 -0.95 16 6 C 0.47 0.68 6.57 36.01 0.24 0.91 16 7 O -0.50 -1.76 11.48 -18.75 -0.22 -1.98 16 8 C -0.08 0.10 2.63 -91.77 -0.24 -0.15 16 9 H 0.11 -0.25 8.14 -51.93 -0.42 -0.67 16 10 C -0.11 0.15 5.14 -26.73 -0.14 0.02 16 11 C -0.13 0.17 5.51 -26.73 -0.15 0.02 16 12 C 0.16 -0.19 2.44 -67.93 -0.17 -0.36 16 13 H 0.10 0.01 7.51 -51.93 -0.39 -0.38 16 14 N -0.69 0.08 5.22 -55.79 -0.29 -0.21 16 15 C 0.57 1.15 8.40 -322.80 -2.71 -1.56 16 16 N -0.56 -1.00 9.20 -13.93 -0.13 -1.12 16 17 C 0.20 0.01 9.92 -17.23 -0.17 -0.16 16 18 C -0.29 0.10 5.36 -104.35 -0.56 -0.46 16 19 C -0.05 0.07 2.83 36.00 0.10 0.17 16 20 O -0.53 -0.08 12.85 -35.23 -0.45 -0.53 16 21 Si 0.68 -1.32 29.95 -169.99 -5.09 -6.41 16 22 C 0.22 0.17 10.99 -17.23 -0.19 -0.02 16 23 N -0.57 -1.38 10.46 -13.93 -0.15 -1.52 16 24 C -0.13 0.31 5.39 -26.70 -0.14 0.17 16 25 C -0.10 0.14 4.50 -26.71 -0.12 0.02 16 26 H 0.06 0.03 8.14 -51.93 -0.42 -0.39 16 27 H 0.07 -0.02 8.14 -51.93 -0.42 -0.45 16 28 H 0.08 0.21 5.89 -51.93 -0.31 -0.09 16 29 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 30 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 31 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 32 H 0.08 0.21 5.89 -51.93 -0.31 -0.09 16 33 H 0.07 -0.02 8.14 -51.93 -0.42 -0.45 16 34 H 0.06 0.03 8.14 -51.93 -0.42 -0.39 16 35 H 0.08 -0.10 8.11 -51.93 -0.42 -0.53 16 36 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 37 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 38 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 39 H 0.41 -0.49 8.72 -40.82 -0.36 -0.84 16 40 H 0.17 -0.35 5.01 -52.48 -0.26 -0.61 16 41 H 0.12 -0.27 7.96 -51.93 -0.41 -0.69 16 42 H 0.38 -0.90 8.70 45.56 0.40 -0.51 16 43 H -0.25 -0.38 7.11 56.52 0.40 0.02 16 44 H -0.26 0.04 7.02 56.52 0.40 0.44 16 45 H 0.17 -0.16 8.06 -52.49 -0.42 -0.59 16 46 H 0.07 -0.24 8.14 -51.93 -0.42 -0.66 16 47 H 0.08 -0.18 8.14 -51.93 -0.42 -0.61 16 48 H 0.08 -0.08 8.10 -51.93 -0.42 -0.50 16 49 H 0.08 -0.04 8.10 -51.93 -0.42 -0.46 16 LS Contribution 387.38 15.07 5.84 5.84 Total: 0.00 -6.62 387.38 -12.29 -18.91 By element: Atomic # 1 Polarization: -3.37 SS G_CDS: -8.02 Total: -11.39 kcal Atomic # 6 Polarization: 2.78 SS G_CDS: -3.40 Total: -0.62 kcal Atomic # 7 Polarization: -2.30 SS G_CDS: -0.57 Total: -2.86 kcal Atomic # 8 Polarization: -2.41 SS G_CDS: -1.05 Total: -3.46 kcal Atomic # 14 Polarization: -1.32 SS G_CDS: -5.09 Total: -6.41 kcal Total LS contribution 5.84 Total: 5.84 kcal Total: -6.62 -12.29 -18.91 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17607844_12175864.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -51.013 kcal (2) G-P(sol) polarization free energy of solvation -6.618 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -57.631 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.293 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.911 kcal (6) G-S(sol) free energy of system = (1) + (5) -69.924 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds