Wall clock time and date at job start Mon Mar 8 2021 08:03:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.53001 * 109.47029 * 2 1 4 4 C 1.52997 * 109.46929 * 239.99797 * 2 1 3 5 5 O 1.45199 * 109.47144 * 119.99861 * 2 1 3 6 6 C 1.34228 * 117.00110 * 60.00002 * 5 2 1 7 7 O 1.20822 * 120.00078 * 359.97438 * 6 5 2 8 8 C 1.50699 * 119.99999 * 179.97438 * 6 5 2 9 9 H 1.09007 * 109.46849 * 60.00067 * 8 6 5 10 10 C 1.53002 * 109.47266 * 179.97438 * 8 6 5 11 11 C 1.53000 * 109.47085 * 180.02562 * 10 8 6 12 12 C 1.52997 * 109.47104 * 299.99889 * 11 10 8 13 13 H 1.08990 * 109.47430 * 300.00262 * 12 11 10 14 14 N 1.46499 * 109.46833 * 179.97438 * 12 11 10 15 15 C 1.39005 * 120.00007 * 155.00010 * 14 12 11 16 16 N 1.32393 * 119.70921 * 179.72800 * 15 14 12 17 17 C 1.31972 * 121.62376 * 179.71508 * 16 15 14 18 18 C 1.38023 * 120.85708 * 0.56631 * 17 16 15 19 19 C 1.50700 * 120.33780 * 179.74805 * 18 17 16 20 20 O 1.42895 * 109.47120 * 244.97630 * 19 18 17 21 21 Si 1.86297 * 109.47063 * 4.97806 * 19 18 17 22 22 C 1.38888 * 119.32550 * 359.72463 * 18 17 16 23 23 C 1.38292 * 118.50598 * 359.97438 * 22 18 17 24 24 C 1.52998 * 109.47053 * 60.00471 * 12 11 10 25 25 C 1.53000 * 109.47154 * 299.99761 * 24 12 11 26 26 H 1.09007 * 109.47205 * 300.00163 * 1 2 3 27 27 H 1.08996 * 109.47306 * 60.00122 * 1 2 3 28 28 H 1.09001 * 109.47002 * 180.02562 * 1 2 3 29 29 H 1.09003 * 109.46897 * 180.02562 * 3 2 1 30 30 H 1.09005 * 109.47019 * 299.99808 * 3 2 1 31 31 H 1.08995 * 109.47619 * 60.00099 * 3 2 1 32 32 H 1.08998 * 109.47474 * 299.99935 * 4 2 1 33 33 H 1.09005 * 109.47261 * 60.00104 * 4 2 1 34 34 H 1.09007 * 109.46894 * 179.97438 * 4 2 1 35 35 H 1.08997 * 109.46559 * 60.00012 * 10 8 6 36 36 H 1.09005 * 109.47082 * 300.00777 * 10 8 6 37 37 H 1.09002 * 109.46726 * 180.02562 * 11 10 8 38 38 H 1.08995 * 109.46824 * 60.00579 * 11 10 8 39 39 H 0.97005 * 120.00261 * 335.00546 * 14 12 11 40 40 H 1.08001 * 119.57224 * 180.27156 * 17 16 15 41 41 H 1.08999 * 109.47021 * 124.97638 * 19 18 17 42 42 H 0.96695 * 114.00109 * 179.97438 * 20 19 18 43 43 H 1.48498 * 109.99965 * 178.68357 * 21 19 18 44 44 H 1.48506 * 109.99955 * 300.00328 * 21 19 18 45 45 H 1.08000 * 120.74354 * 179.97438 * 22 18 17 46 46 H 1.08004 * 120.44727 * 179.97438 * 23 22 18 47 47 H 1.09007 * 109.47248 * 59.99543 * 24 12 11 48 48 H 1.08997 * 109.47450 * 179.97438 * 24 12 11 49 49 H 1.09002 * 109.47232 * 300.00298 * 25 24 12 50 50 H 1.09002 * 109.47099 * 179.97438 * 25 24 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 2.0399 -0.7213 -1.2492 5 8 2.0140 -0.6844 1.1856 6 6 1.6533 -1.9684 1.3379 7 8 0.9559 -2.5025 0.5084 8 6 2.1183 -2.7436 2.5437 9 1 1.7548 -2.2587 3.4497 10 6 1.5706 -4.1706 2.4748 11 6 2.0422 -4.9575 3.6993 12 6 3.5715 -4.9987 3.7211 13 1 3.9349 -5.4839 2.8154 14 7 4.0229 -5.7516 4.8939 15 6 5.2672 -6.3711 4.8854 16 7 5.6717 -7.0455 5.9504 17 6 6.8431 -7.6527 5.9812 18 6 7.6988 -7.5955 4.8998 19 6 9.0361 -8.2884 4.9498 20 8 10.0798 -7.3142 4.8924 21 14 9.1756 -9.2553 6.5361 22 6 7.3146 -6.8932 3.7648 23 6 6.0788 -6.2725 3.7595 24 6 4.1191 -3.5717 3.7901 25 6 3.6476 -2.7847 2.5656 26 1 -0.3634 0.5139 0.8900 27 1 -0.3634 0.5138 -0.8900 28 1 -0.3633 -1.0277 0.0005 29 1 3.1300 1.4425 -0.0005 30 1 1.6766 1.9563 -0.8900 31 1 1.6767 1.9564 0.8899 32 1 1.6766 -1.7489 -1.2492 33 1 1.6766 -0.2075 -2.1393 34 1 3.1300 -0.7209 -1.2494 35 1 1.9337 -4.6557 1.5687 36 1 0.4811 -4.1413 2.4595 37 1 1.6524 -5.9742 3.6499 38 1 1.6787 -4.4722 4.6050 39 1 3.4535 -5.8179 5.6765 40 1 7.1380 -8.1974 6.8660 41 1 9.1255 -8.9671 4.1016 42 1 10.9704 -7.6897 4.9206 43 1 10.4770 -9.9689 6.5832 44 1 9.0550 -8.3412 7.7003 45 1 7.9664 -6.8332 2.9057 46 1 5.7487 -5.7177 2.8937 47 1 3.7556 -3.0864 4.6960 48 1 5.2085 -3.6010 3.8061 49 1 4.0110 -3.2700 1.6598 50 1 4.0374 -1.7680 2.6150 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_17607844_13915762.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:03:06 Heat of formation + Delta-G solvation = -85.476821 kcal Electronic energy + Delta-G solvation = -29347.197852 eV Core-core repulsion = 25340.577908 eV Total energy + Delta-G solvation = -4006.619944 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 335.193 amu Computer time = 1.23 seconds Orbital eigenvalues (eV) -42.04346 -41.37366 -39.87378 -38.13014 -37.74337 -36.01921 -34.99640 -33.47317 -32.27331 -31.84024 -30.25981 -28.37634 -28.37151 -26.49007 -25.02893 -24.76768 -23.78136 -22.81490 -21.99977 -21.14366 -20.46391 -18.66680 -18.49428 -18.20640 -18.08437 -17.51810 -17.09128 -16.63040 -16.39313 -15.92774 -15.65581 -15.53045 -15.34166 -15.18618 -15.01107 -14.71905 -14.63200 -14.22684 -14.09495 -13.88871 -13.82680 -13.68377 -13.50759 -13.37159 -13.16675 -12.94845 -12.88915 -12.74036 -12.61439 -12.39056 -12.34755 -12.24484 -12.03015 -11.92001 -11.81087 -11.50529 -11.35398 -10.99824 -10.83408 -10.65968 -10.54066 -10.24296 -8.65340 -4.94808 0.31863 0.50084 1.24491 1.31075 1.60390 1.65463 1.97273 2.07494 2.86497 3.39604 3.42429 3.43848 3.52044 3.66645 3.71404 3.75981 3.82929 3.87704 3.91827 3.94114 4.00275 4.06443 4.13997 4.15864 4.18498 4.28558 4.36364 4.46794 4.51631 4.56913 4.58086 4.60946 4.72488 4.73245 4.75962 4.81302 4.84872 4.86700 4.91135 4.93554 5.00793 5.04742 5.08025 5.12394 5.18518 5.26446 5.28609 5.37246 5.57370 5.60084 6.04900 6.46684 6.58403 6.86302 7.22882 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.116 3.884 3 C -0.142 4.142 4 C -0.183 4.183 5 O -0.350 6.350 6 C 0.468 3.532 7 O -0.501 6.501 8 C -0.083 4.083 9 H 0.110 0.890 10 C -0.099 4.099 11 C -0.125 4.125 12 C 0.152 3.848 13 H 0.085 0.915 14 N -0.719 5.719 15 C 0.410 3.590 16 N -0.539 5.539 17 C 0.158 3.842 18 C -0.189 4.189 19 C -0.060 4.060 20 O -0.538 6.538 21 Si 0.677 3.323 22 C -0.005 4.005 23 C -0.240 4.240 24 C -0.135 4.135 25 C -0.108 4.108 26 H 0.061 0.939 27 H 0.072 0.928 28 H 0.083 0.917 29 H 0.067 0.933 30 H 0.079 0.921 31 H 0.067 0.933 32 H 0.083 0.917 33 H 0.072 0.928 34 H 0.061 0.939 35 H 0.077 0.923 36 H 0.080 0.920 37 H 0.079 0.921 38 H 0.074 0.926 39 H 0.406 0.594 40 H 0.155 0.845 41 H 0.074 0.926 42 H 0.378 0.622 43 H -0.260 1.260 44 H -0.253 1.253 45 H 0.134 0.866 46 H 0.134 0.866 47 H 0.073 0.927 48 H 0.074 0.926 49 H 0.071 0.929 50 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.399 -0.245 -1.323 1.403 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.081 3.919 3 C -0.199 4.199 4 C -0.240 4.240 5 O -0.267 6.267 6 C 0.311 3.689 7 O -0.388 6.388 8 C -0.102 4.102 9 H 0.128 0.872 10 C -0.137 4.137 11 C -0.163 4.163 12 C 0.047 3.953 13 H 0.103 0.897 14 N -0.350 5.350 15 C 0.174 3.826 16 N -0.256 5.256 17 C 0.001 3.999 18 C -0.194 4.194 19 C -0.171 4.171 20 O -0.345 6.345 21 Si 0.578 3.422 22 C -0.031 4.031 23 C -0.265 4.265 24 C -0.174 4.174 25 C -0.146 4.146 26 H 0.080 0.920 27 H 0.091 0.909 28 H 0.102 0.898 29 H 0.086 0.914 30 H 0.098 0.902 31 H 0.086 0.914 32 H 0.102 0.898 33 H 0.091 0.909 34 H 0.080 0.920 35 H 0.096 0.904 36 H 0.099 0.901 37 H 0.098 0.902 38 H 0.092 0.908 39 H 0.242 0.758 40 H 0.172 0.828 41 H 0.092 0.908 42 H 0.226 0.774 43 H -0.185 1.185 44 H -0.178 1.178 45 H 0.151 0.849 46 H 0.152 0.848 47 H 0.092 0.908 48 H 0.093 0.907 49 H 0.090 0.910 50 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -1.285 -0.025 -0.338 1.328 hybrid contribution 1.364 0.629 -0.965 1.785 sum 0.080 0.604 -1.303 1.438 Atomic orbital electron populations 1.22496 0.93906 1.04715 1.02956 1.22222 0.94459 0.92354 0.82896 1.21868 1.02307 0.92473 1.03261 1.22492 1.01718 1.03090 0.96729 1.86551 1.69662 1.25264 1.45224 1.23585 0.77253 0.80694 0.87393 1.90595 1.35101 1.69991 1.43130 1.21191 0.98067 0.95796 0.95173 0.87217 1.21384 1.01747 0.92051 0.98555 1.21794 0.93757 1.01683 0.99049 1.21073 0.94431 0.91316 0.88518 0.89684 1.44567 1.15999 1.55678 1.18805 1.18381 0.86332 0.88660 0.89242 1.67173 1.18016 1.13578 1.26825 1.22192 0.88189 0.93314 0.96222 1.19900 0.96542 1.06296 0.96660 1.24522 0.86600 0.95139 1.10791 1.86598 1.17096 1.34782 1.96055 0.95173 0.87055 0.83298 0.76690 1.21169 0.94018 0.90820 0.97070 1.21468 0.96586 1.08624 0.99779 1.22066 1.01734 0.95095 0.98465 1.21497 0.92017 1.02037 0.99059 0.91960 0.90869 0.89839 0.91393 0.90191 0.91395 0.89843 0.90891 0.91951 0.90446 0.90135 0.90189 0.90756 0.75837 0.82830 0.90824 0.77384 1.18514 1.17790 0.84850 0.84842 0.90827 0.90715 0.91047 0.89931 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.13 8.37 37.16 0.31 0.18 16 2 C 0.12 0.08 1.13 -90.62 -0.10 -0.02 16 3 C -0.14 0.14 8.85 37.16 0.33 0.46 16 4 C -0.18 -0.11 8.37 37.16 0.31 0.20 16 5 O -0.35 -0.49 9.79 -39.25 -0.38 -0.87 16 6 C 0.47 0.53 6.57 36.01 0.24 0.77 16 7 O -0.50 -1.63 11.48 -18.75 -0.22 -1.84 16 8 C -0.08 0.13 2.63 -91.77 -0.24 -0.11 16 9 H 0.11 -0.28 8.14 -51.92 -0.42 -0.70 16 10 C -0.10 0.18 4.49 -26.73 -0.12 0.06 16 11 C -0.12 0.36 5.39 -26.73 -0.14 0.21 16 12 C 0.15 -0.32 2.14 -67.93 -0.15 -0.46 16 13 H 0.09 -0.17 6.45 -51.93 -0.33 -0.50 16 14 N -0.72 0.26 5.24 -53.94 -0.28 -0.02 16 15 C 0.41 0.81 7.63 -155.02 -1.18 -0.37 16 16 N -0.54 -1.82 10.39 -12.44 -0.13 -1.95 16 17 C 0.16 0.37 9.84 -17.57 -0.17 0.19 16 18 C -0.19 -0.34 5.39 -104.46 -0.56 -0.90 16 19 C -0.06 -0.01 2.81 36.01 0.10 0.09 16 20 O -0.54 -0.72 12.82 -35.23 -0.45 -1.17 16 21 Si 0.68 -0.45 29.88 -169.99 -5.08 -5.53 16 22 C 0.00 -0.01 9.84 -39.32 -0.39 -0.39 16 23 C -0.24 -0.27 8.83 -39.23 -0.35 -0.61 16 24 C -0.13 0.29 5.42 -26.73 -0.14 0.14 16 25 C -0.11 0.23 5.14 -26.73 -0.14 0.10 16 26 H 0.06 0.03 8.14 -51.93 -0.42 -0.40 16 27 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 28 H 0.08 0.20 5.89 -51.93 -0.31 -0.10 16 29 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 30 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 31 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 32 H 0.08 0.19 5.89 -51.93 -0.31 -0.11 16 33 H 0.07 -0.03 8.14 -51.93 -0.42 -0.46 16 34 H 0.06 0.02 8.14 -51.93 -0.42 -0.40 16 35 H 0.08 -0.08 8.10 -51.93 -0.42 -0.51 16 36 H 0.08 -0.10 8.10 -51.93 -0.42 -0.52 16 37 H 0.08 -0.21 8.14 -51.93 -0.42 -0.64 16 38 H 0.07 -0.25 8.14 -51.93 -0.42 -0.67 16 39 H 0.41 -0.34 8.73 -40.82 -0.36 -0.70 16 40 H 0.16 0.08 4.87 -52.49 -0.26 -0.18 16 41 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 42 H 0.38 -1.00 8.74 45.56 0.40 -0.60 16 43 H -0.26 -0.32 7.11 56.52 0.40 0.08 16 44 H -0.25 -0.62 7.05 56.52 0.40 -0.23 16 45 H 0.13 0.00 8.06 -52.49 -0.42 -0.43 16 46 H 0.13 -0.09 6.08 -52.48 -0.32 -0.41 16 47 H 0.07 -0.15 8.14 -51.92 -0.42 -0.57 16 48 H 0.07 -0.08 7.66 -51.93 -0.40 -0.48 16 49 H 0.07 -0.14 8.14 -51.93 -0.42 -0.57 16 50 H 0.08 -0.15 8.11 -51.93 -0.42 -0.58 16 LS Contribution 388.94 15.07 5.86 5.86 Total: 0.00 -6.86 388.94 -11.33 -18.19 By element: Atomic # 1 Polarization: -3.96 SS G_CDS: -8.25 Total: -12.21 kcal Atomic # 6 Polarization: 1.94 SS G_CDS: -2.40 Total: -0.46 kcal Atomic # 7 Polarization: -1.56 SS G_CDS: -0.41 Total: -1.97 kcal Atomic # 8 Polarization: -2.83 SS G_CDS: -1.05 Total: -3.88 kcal Atomic # 14 Polarization: -0.45 SS G_CDS: -5.08 Total: -5.53 kcal Total LS contribution 5.86 Total: 5.86 kcal Total: -6.86 -11.33 -18.19 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17607844_13915762.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -67.288 kcal (2) G-P(sol) polarization free energy of solvation -6.860 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -74.148 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.329 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.189 kcal (6) G-S(sol) free energy of system = (1) + (5) -85.477 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds