Wall clock time and date at job start Mon Mar 8 2021 08:03:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.33327 * 125.95374 * 2 1 4 4 C 1.50705 * 122.70745 * 0.02602 * 3 2 1 5 5 O 1.42895 * 109.46971 * 44.28466 * 4 3 2 6 6 Si 1.86299 * 109.47049 * 164.28250 * 4 3 2 7 7 N 1.32120 * 114.58446 * 180.02562 * 3 2 1 8 8 C 1.29685 * 116.86115 * 359.97438 * 7 3 2 9 9 N 1.38614 * 124.94639 * 179.97438 * 8 7 3 10 10 C 1.46497 * 120.00029 * 180.02562 * 9 8 7 11 11 H 1.09000 * 109.47182 * 325.00354 * 10 9 8 12 12 C 1.53002 * 109.47279 * 85.00192 * 10 9 8 13 13 C 1.52999 * 109.46854 * 179.97438 * 12 10 9 14 14 C 1.52993 * 109.47561 * 300.00082 * 13 12 10 15 15 H 1.09009 * 109.46953 * 300.00376 * 14 13 12 16 16 C 1.50694 * 109.47239 * 180.02562 * 14 13 12 17 17 O 1.20832 * 119.99740 * 240.00048 * 16 14 13 18 18 O 1.34229 * 120.00510 * 59.99622 * 16 14 13 19 19 C 1.45203 * 117.00232 * 179.97438 * 18 16 14 20 20 C 1.53001 * 109.46719 * 60.00508 * 19 18 16 21 21 C 1.53002 * 109.46934 * 179.97438 * 19 18 16 22 22 C 1.52994 * 109.47302 * 300.00456 * 19 18 16 23 23 C 1.52993 * 109.47133 * 60.00275 * 14 13 12 24 24 C 1.53001 * 109.47070 * 299.99906 * 23 14 13 25 25 S 1.70964 * 110.10453 * 0.24698 * 8 7 3 26 26 H 1.09001 * 109.47126 * 84.36701 * 1 2 3 27 27 H 1.08996 * 109.46776 * 204.36633 * 1 2 3 28 28 H 1.08997 * 109.46844 * 324.36482 * 1 2 3 29 29 H 1.08994 * 109.47220 * 284.28563 * 4 3 2 30 30 H 0.96706 * 114.00433 * 60.00109 * 5 4 3 31 31 H 1.48501 * 109.99986 * 58.68126 * 6 4 3 32 32 H 1.48503 * 109.99960 * 179.97438 * 6 4 3 33 33 H 0.97001 * 120.00205 * 0.02562 * 9 8 7 34 34 H 1.08993 * 109.46774 * 300.00021 * 12 10 9 35 35 H 1.09000 * 109.46881 * 59.99978 * 12 10 9 36 36 H 1.09008 * 109.46614 * 180.02562 * 13 12 10 37 37 H 1.09000 * 109.47260 * 60.00375 * 13 12 10 38 38 H 1.08998 * 109.47626 * 60.00064 * 20 19 18 39 39 H 1.09003 * 109.46999 * 180.02562 * 20 19 18 40 40 H 1.09001 * 109.47036 * 299.99409 * 20 19 18 41 41 H 1.09001 * 109.46835 * 60.00749 * 21 19 18 42 42 H 1.09003 * 109.46619 * 180.02562 * 21 19 18 43 43 H 1.08996 * 109.47058 * 300.00258 * 21 19 18 44 44 H 1.09001 * 109.47514 * 59.99940 * 22 19 18 45 45 H 1.08999 * 109.47475 * 180.02562 * 22 19 18 46 46 H 1.09001 * 109.47344 * 299.99788 * 22 19 18 47 47 H 1.09004 * 109.47178 * 180.02562 * 23 14 13 48 48 H 1.08999 * 109.47528 * 59.99927 * 23 14 13 49 49 H 1.09000 * 109.47358 * 300.00004 * 24 23 14 50 50 H 1.09008 * 109.47012 * 179.97438 * 24 23 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2898 1.0793 0.0000 4 6 1.7414 2.4830 0.0006 5 8 0.6701 2.5754 0.9417 6 14 3.0905 3.6765 0.4762 7 7 3.5851 0.8188 -0.0005 8 6 3.9315 -0.4309 -0.0005 9 7 5.2385 -0.8926 -0.0015 10 6 5.5066 -2.3328 -0.0019 11 1 4.7459 -2.8442 0.5880 12 6 5.4753 -2.8570 -1.4389 13 6 5.7560 -4.3611 -1.4393 14 6 7.1351 -4.6227 -0.8308 15 1 7.8956 -4.1110 -1.4209 16 6 7.4118 -6.1041 -0.8318 17 8 7.6131 -6.6817 0.2103 18 8 7.4345 -6.7820 -1.9901 19 6 7.7078 -8.2061 -1.9153 20 6 6.6360 -8.8868 -1.0616 21 6 7.6921 -8.8030 -3.3240 22 6 9.0823 -8.4290 -1.2815 23 6 7.1664 -4.0986 0.6062 24 6 6.8858 -2.5945 0.6066 25 16 2.5413 -1.4260 -0.0066 26 1 -0.3633 0.1009 -1.0227 27 1 -0.3633 -0.9361 0.4240 28 1 -0.3633 0.8352 0.5987 29 1 1.3727 2.7294 -0.9950 30 1 0.9263 2.3689 1.8510 31 1 4.2243 3.5674 -0.4766 32 1 2.5626 5.0646 0.4799 33 1 5.9756 -0.2620 -0.0019 34 1 4.4929 -2.6703 -1.8724 35 1 6.2360 -2.3457 -2.0288 36 1 5.7342 -4.7345 -2.4632 37 1 4.9956 -4.8727 -0.8493 38 1 5.6567 -8.7281 -1.5131 39 1 6.8414 -9.9558 -1.0050 40 1 6.6467 -8.4616 -0.0580 41 1 8.4554 -8.3181 -3.9325 42 1 7.8969 -9.8722 -3.2677 43 1 6.7127 -8.6442 -3.7750 44 1 9.0930 -8.0038 -0.2779 45 1 9.2877 -9.4980 -1.2258 46 1 9.8459 -7.9440 -1.8897 47 1 8.1491 -4.2846 1.0395 48 1 6.4060 -4.6102 1.1962 49 1 7.6462 -2.0829 0.0166 50 1 6.9076 -2.2211 1.6305 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_17607844_15704122.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:03:15 Heat of formation + Delta-G solvation = -84.534403 kcal Electronic energy + Delta-G solvation = -29976.910176 eV Core-core repulsion = 25903.945726 eV Total energy + Delta-G solvation = -4072.964450 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 355.165 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -42.06366 -41.03195 -40.08219 -38.13466 -37.60734 -36.04749 -35.01866 -32.98351 -32.09684 -30.95991 -28.94160 -28.39726 -28.39130 -25.81546 -25.28573 -24.27167 -23.86830 -22.62902 -21.51868 -20.52522 -20.31008 -19.09678 -18.27116 -17.91402 -17.58461 -17.34040 -17.04862 -16.66909 -16.58146 -15.88333 -15.59926 -15.54710 -15.49757 -15.15572 -14.95269 -14.71300 -14.37954 -14.17450 -14.09176 -13.72838 -13.66137 -13.56248 -13.42477 -13.29933 -13.19658 -12.98850 -12.91665 -12.88371 -12.77301 -12.59174 -12.43568 -12.37682 -12.18241 -12.07650 -11.86169 -11.78734 -11.62511 -11.37990 -10.96253 -10.85727 -10.53312 -10.28014 -9.97176 -8.62148 -4.77189 0.05675 0.20304 0.81318 1.20722 1.47562 1.60951 1.84547 1.90086 1.98180 2.25789 3.29833 3.32614 3.40894 3.47391 3.58183 3.68784 3.69595 3.76575 3.81875 3.89666 3.95567 4.03423 4.07811 4.19646 4.20791 4.39889 4.44044 4.49673 4.52299 4.55014 4.55707 4.62483 4.70852 4.71893 4.80048 4.82057 4.82810 4.82951 4.84477 4.92848 4.94726 5.02049 5.04432 5.08123 5.17138 5.24426 5.26440 5.35692 5.55914 5.60231 6.27354 6.52732 6.82692 6.98384 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 C -0.232 4.232 3 C 0.063 3.937 4 C -0.035 4.035 5 O -0.536 6.536 6 Si 0.722 3.278 7 N -0.543 5.543 8 C 0.320 3.680 9 N -0.691 5.691 10 C 0.149 3.851 11 H 0.085 0.915 12 C -0.136 4.136 13 C -0.108 4.108 14 C -0.084 4.084 15 H 0.111 0.889 16 C 0.468 3.532 17 O -0.500 6.500 18 O -0.350 6.350 19 C 0.117 3.883 20 C -0.183 4.183 21 C -0.142 4.142 22 C -0.184 4.184 23 C -0.100 4.100 24 C -0.123 4.123 25 S 0.098 5.902 26 H 0.067 0.933 27 H 0.061 0.939 28 H 0.100 0.900 29 H 0.118 0.882 30 H 0.380 0.620 31 H -0.257 1.257 32 H -0.265 1.265 33 H 0.412 0.588 34 H 0.074 0.926 35 H 0.076 0.924 36 H 0.084 0.916 37 H 0.072 0.928 38 H 0.062 0.938 39 H 0.072 0.928 40 H 0.083 0.917 41 H 0.067 0.933 42 H 0.080 0.920 43 H 0.067 0.933 44 H 0.083 0.917 45 H 0.073 0.927 46 H 0.061 0.939 47 H 0.082 0.918 48 H 0.078 0.922 49 H 0.077 0.923 50 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.361 -2.921 0.339 3.240 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.137 4.137 2 C -0.355 4.355 3 C -0.067 4.067 4 C -0.148 4.148 5 O -0.340 6.340 6 Si 0.624 3.376 7 N -0.270 5.270 8 C -0.051 4.051 9 N -0.331 5.331 10 C 0.044 3.956 11 H 0.102 0.898 12 C -0.175 4.175 13 C -0.146 4.146 14 C -0.103 4.103 15 H 0.129 0.871 16 C 0.311 3.689 17 O -0.387 6.387 18 O -0.267 6.267 19 C 0.081 3.919 20 C -0.241 4.241 21 C -0.199 4.199 22 C -0.241 4.241 23 C -0.138 4.138 24 C -0.161 4.161 25 S 0.347 5.653 26 H 0.086 0.914 27 H 0.080 0.920 28 H 0.119 0.881 29 H 0.135 0.865 30 H 0.227 0.773 31 H -0.182 1.182 32 H -0.191 1.191 33 H 0.251 0.749 34 H 0.093 0.907 35 H 0.095 0.905 36 H 0.103 0.897 37 H 0.091 0.909 38 H 0.081 0.919 39 H 0.091 0.909 40 H 0.102 0.898 41 H 0.086 0.914 42 H 0.098 0.902 43 H 0.086 0.914 44 H 0.102 0.898 45 H 0.092 0.908 46 H 0.080 0.920 47 H 0.101 0.899 48 H 0.097 0.903 49 H 0.095 0.905 50 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges 1.859 -3.167 -0.144 3.675 hybrid contribution -0.096 0.381 -0.574 0.696 sum 1.763 -2.786 -0.718 3.374 Atomic orbital electron populations 1.20348 0.86601 1.03672 1.03104 1.25171 1.01272 0.92742 1.16295 1.20079 0.86697 0.97207 1.02759 1.24567 0.98090 0.95844 0.96302 1.86451 1.35279 1.91804 1.20482 0.93746 0.77081 0.75307 0.91466 1.65903 1.17180 1.16646 1.27288 1.23254 0.91815 0.91447 0.98589 1.44033 1.01790 1.06892 1.80372 1.21222 0.98617 0.78936 0.96805 0.89751 1.22074 1.03463 0.95308 0.96658 1.21491 0.94460 0.96198 1.02440 1.21188 1.00686 0.88433 0.99970 0.87143 1.23544 0.72966 0.90585 0.81818 1.90602 1.44562 1.70138 1.33442 1.86548 1.81456 1.23816 1.34875 1.22229 0.95778 0.76525 0.97377 1.22495 0.98118 1.01578 1.01861 1.21870 1.03468 1.00874 0.93706 1.22494 0.95185 1.03367 1.03031 1.21389 1.04252 0.94155 0.93985 1.21783 0.95311 0.96672 1.02361 1.84011 0.96592 1.10677 1.74004 0.91409 0.91964 0.88134 0.86457 0.77264 1.18162 1.19076 0.74940 0.90694 0.90516 0.89702 0.90879 0.91926 0.90869 0.89841 0.91398 0.90169 0.91381 0.89837 0.90849 0.91960 0.89911 0.90327 0.90478 0.89936 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.03 9.97 36.01 0.36 0.33 16 2 C -0.23 -0.39 6.49 -36.02 -0.23 -0.63 16 3 C 0.06 0.14 6.00 -84.18 -0.50 -0.36 16 4 C -0.03 -0.04 2.74 36.01 0.10 0.05 16 5 O -0.54 -0.14 10.21 -35.23 -0.36 -0.50 16 6 Si 0.72 0.90 31.88 -169.99 -5.42 -4.52 16 7 N -0.54 -1.56 8.61 -11.36 -0.10 -1.66 16 8 C 0.32 0.43 8.22 -87.68 -0.72 -0.29 16 9 N -0.69 0.73 5.23 -55.78 -0.29 0.44 16 10 C 0.15 -0.39 2.40 -67.93 -0.16 -0.55 16 11 H 0.08 -0.18 7.26 -51.93 -0.38 -0.56 16 12 C -0.14 0.36 5.51 -26.73 -0.15 0.21 16 13 C -0.11 0.28 5.13 -26.73 -0.14 0.14 16 14 C -0.08 0.18 2.63 -91.78 -0.24 -0.07 16 15 H 0.11 -0.35 8.14 -51.92 -0.42 -0.77 16 16 C 0.47 0.33 6.57 36.00 0.24 0.57 16 17 O -0.50 -1.42 11.49 -18.75 -0.22 -1.63 16 18 O -0.35 -0.35 9.79 -39.25 -0.38 -0.73 16 19 C 0.12 0.04 1.13 -90.62 -0.10 -0.06 16 20 C -0.18 -0.06 8.37 37.16 0.31 0.25 16 21 C -0.14 0.17 8.85 37.16 0.33 0.50 16 22 C -0.18 -0.07 8.37 37.15 0.31 0.24 16 23 C -0.10 0.24 4.49 -26.73 -0.12 0.12 16 24 C -0.12 0.44 5.39 -26.73 -0.14 0.30 16 25 S 0.10 0.07 21.67 -107.50 -2.33 -2.26 16 26 H 0.07 0.03 8.14 -51.93 -0.42 -0.40 16 27 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 28 H 0.10 0.02 5.67 -51.93 -0.29 -0.27 16 29 H 0.12 0.18 7.96 -51.93 -0.41 -0.23 16 30 H 0.38 -1.18 8.70 45.56 0.40 -0.79 16 31 H -0.26 -1.20 7.11 56.52 0.40 -0.80 16 32 H -0.26 -0.97 7.11 56.52 0.40 -0.57 16 33 H 0.41 -0.72 8.73 -40.82 -0.36 -1.08 16 34 H 0.07 -0.12 8.02 -51.93 -0.42 -0.54 16 35 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 36 H 0.08 -0.20 8.11 -51.92 -0.42 -0.63 16 37 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 38 H 0.06 0.00 8.14 -51.93 -0.42 -0.42 16 39 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 40 H 0.08 0.17 5.89 -51.93 -0.31 -0.14 16 41 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 42 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 43 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 44 H 0.08 0.17 5.89 -51.93 -0.31 -0.13 16 45 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 46 H 0.06 0.01 8.14 -51.93 -0.42 -0.41 16 47 H 0.08 -0.15 8.10 -51.93 -0.42 -0.57 16 48 H 0.08 -0.13 8.10 -51.93 -0.42 -0.55 16 49 H 0.08 -0.33 8.14 -51.93 -0.42 -0.75 16 50 H 0.08 -0.29 8.14 -51.92 -0.42 -0.71 16 LS Contribution 401.77 15.07 6.05 6.05 Total: 0.00 -6.24 401.77 -12.36 -18.61 By element: Atomic # 1 Polarization: -6.11 SS G_CDS: -8.45 Total: -14.57 kcal Atomic # 6 Polarization: 1.64 SS G_CDS: -0.87 Total: 0.77 kcal Atomic # 7 Polarization: -0.83 SS G_CDS: -0.39 Total: -1.22 kcal Atomic # 8 Polarization: -1.91 SS G_CDS: -0.96 Total: -2.87 kcal Atomic # 14 Polarization: 0.90 SS G_CDS: -5.42 Total: -4.52 kcal Atomic # 16 Polarization: 0.07 SS G_CDS: -2.33 Total: -2.26 kcal Total LS contribution 6.05 Total: 6.05 kcal Total: -6.24 -12.36 -18.61 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17607844_15704122.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -65.927 kcal (2) G-P(sol) polarization free energy of solvation -6.244 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -72.171 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.364 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.608 kcal (6) G-S(sol) free energy of system = (1) + (5) -84.534 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds