Wall clock time and date at job start Mon Mar 8 2021 10:51:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86293 * 109.47216 * 2 1 4 4 C 1.50707 * 109.46836 * 120.00061 * 2 1 3 5 5 C 1.38018 * 120.33108 * 245.00145 * 4 2 1 6 6 N 1.31977 * 120.85481 * 180.02562 * 5 4 2 7 7 C 1.32397 * 121.62351 * 359.97438 * 6 5 4 8 8 N 1.38993 * 119.70858 * 179.97438 * 7 6 5 9 9 C 1.46505 * 120.00282 * 179.97438 * 8 7 6 10 10 C 1.50696 * 112.84649 * 48.80074 * 9 8 7 11 11 C 1.38446 * 120.00834 * 189.66984 * 10 9 8 12 12 F 1.35097 * 120.02583 * 359.97438 * 11 10 9 13 13 C 1.38487 * 119.94383 * 180.02562 * 11 10 9 14 14 C 1.38171 * 119.97568 * 359.97438 * 13 11 10 15 15 C 1.38266 * 120.02697 * 0.02562 * 14 13 11 16 16 C 1.38211 * 120.01727 * 9.39966 * 10 9 8 17 17 C 1.53782 * 113.61010 * 277.49659 * 9 8 7 18 18 C 1.53778 * 87.08237 * 270.88098 * 17 9 8 19 19 H 1.08996 * 113.69003 * 220.00787 * 18 17 9 20 20 O 1.42906 * 113.61230 * 89.11847 * 18 17 9 21 21 C 1.53776 * 87.08148 * 334.57196 * 18 17 9 22 22 C 1.39139 * 120.58601 * 359.97438 * 7 6 5 23 23 C 1.38305 * 119.09902 * 0.02562 * 22 7 6 24 24 H 0.96699 * 113.99917 * 299.99830 * 1 2 3 25 25 H 1.08997 * 109.47188 * 240.00027 * 2 1 3 26 26 H 1.48497 * 110.00015 * 299.99910 * 3 2 1 27 27 H 1.48505 * 109.99843 * 61.31659 * 3 2 1 28 28 H 1.08002 * 119.57577 * 359.97438 * 5 4 2 29 29 H 0.97001 * 119.99960 * 359.97438 * 8 7 6 30 30 H 1.08004 * 120.00792 * 180.02562 * 13 11 10 31 31 H 1.08004 * 119.98573 * 179.97438 * 14 13 11 32 32 H 1.07997 * 119.97530 * 179.97438 * 15 14 13 33 33 H 1.08000 * 119.98956 * 359.97438 * 16 10 9 34 34 H 1.09002 * 113.61733 * 25.43415 * 17 9 8 35 35 H 1.09007 * 113.61100 * 156.33246 * 17 9 8 36 36 H 0.96701 * 113.99704 * 82.50211 * 20 18 17 37 37 H 1.09003 * 113.61451 * 270.88292 * 21 18 17 38 38 H 1.09000 * 113.69445 * 139.99323 * 21 18 17 39 39 H 1.07999 * 120.45538 * 180.02562 * 22 7 6 40 40 H 1.07998 * 120.74473 * 179.72840 * 23 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 1.2305 5 6 2.6382 -0.0201 2.1942 6 7 3.0833 -0.6321 3.2755 7 6 2.8715 -1.9230 3.4794 8 7 3.3588 -2.5273 4.6324 9 6 3.1277 -3.9552 4.8648 10 6 3.4739 -4.8060 3.6702 11 6 3.1278 -6.1464 3.6511 12 9 2.4801 -6.6924 4.7035 13 6 3.4472 -6.9272 2.5529 14 6 4.1102 -6.3678 1.4774 15 6 4.4552 -5.0290 1.4976 16 6 4.1321 -4.2474 2.5909 17 6 1.7464 -4.2658 5.4652 18 6 2.3955 -4.0913 6.8483 19 1 2.0544 -4.8168 7.5868 20 8 2.3586 -2.7473 7.3325 21 6 3.7292 -4.4700 6.1831 22 6 2.1654 -2.6801 2.5498 23 6 1.6866 -2.0661 1.4067 24 1 -0.3933 0.4417 0.7651 25 1 1.7924 -0.5138 -0.8900 26 1 1.5615 2.4678 -1.2085 27 1 1.5878 2.4585 1.2243 28 1 2.8304 1.0343 2.0613 29 1 3.8520 -2.0036 5.2831 30 1 3.1773 -7.9729 2.5367 31 1 4.3596 -6.9767 0.6210 32 1 4.9738 -4.5927 0.6567 33 1 4.3979 -3.2007 2.6035 34 1 0.9922 -3.5121 5.2386 35 1 1.4034 -5.2817 5.2688 36 1 1.5222 -2.5032 7.7520 37 1 3.9283 -5.5416 6.1830 38 1 4.5768 -3.8820 6.5353 39 1 1.9934 -3.7329 2.7185 40 1 1.1390 -2.6293 0.6656 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_17639086_13915762.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:51:22 Heat of formation + Delta-G solvation = 7.404276 kcal Electronic energy + Delta-G solvation = -27483.687861 eV Core-core repulsion = 23567.795815 eV Total energy + Delta-G solvation = -3915.892046 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.121 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -50.16652 -42.28935 -40.71959 -39.55024 -38.00593 -36.62360 -34.70710 -33.48604 -31.95332 -31.44143 -31.10340 -27.14775 -26.73295 -25.48926 -24.79764 -23.59069 -22.98099 -22.39996 -20.72824 -19.14416 -18.54337 -18.39895 -18.19115 -17.77931 -17.26775 -17.08914 -16.79160 -16.39294 -16.30337 -15.99122 -15.70695 -15.54715 -15.36124 -15.05455 -14.69441 -14.42171 -14.26537 -13.98325 -13.80943 -13.64649 -13.56112 -13.22640 -13.03549 -12.61932 -12.42728 -12.38735 -11.99570 -11.90933 -11.80356 -11.20302 -10.84409 -10.70525 -10.52862 -10.31857 -9.84952 -9.69958 -8.66042 -4.93887 -0.00624 0.04818 0.32476 0.50428 1.32389 1.61435 1.93475 1.99411 2.43662 2.86202 2.92263 3.13768 3.22498 3.37496 3.43690 3.49869 3.64213 3.69220 3.73285 3.81457 3.89703 4.02071 4.11996 4.18081 4.26638 4.29078 4.39393 4.53835 4.59499 4.62472 4.72679 4.76856 4.81337 4.84757 4.89430 4.95189 5.02192 5.06252 5.23084 5.34402 5.38154 5.57505 5.77203 6.03868 6.44203 6.54704 6.61742 7.20565 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.532 6.532 2 C -0.058 4.058 3 Si 0.679 3.321 4 C -0.231 4.231 5 C 0.150 3.850 6 N -0.536 5.536 7 C 0.409 3.591 8 N -0.688 5.688 9 C 0.209 3.791 10 C -0.127 4.127 11 C 0.106 3.894 12 F -0.132 7.132 13 C -0.153 4.153 14 C -0.085 4.085 15 C -0.129 4.129 16 C -0.068 4.068 17 C -0.194 4.194 18 C 0.085 3.915 19 H 0.076 0.924 20 O -0.548 6.548 21 C -0.124 4.124 22 C -0.235 4.235 23 C -0.010 4.010 24 H 0.375 0.625 25 H 0.116 0.884 26 H -0.256 1.256 27 H -0.259 1.259 28 H 0.155 0.845 29 H 0.415 0.585 30 H 0.138 0.862 31 H 0.135 0.865 32 H 0.131 0.869 33 H 0.133 0.867 34 H 0.080 0.920 35 H 0.117 0.883 36 H 0.384 0.616 37 H 0.113 0.887 38 H 0.089 0.911 39 H 0.139 0.861 40 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.668 -2.777 -0.154 3.243 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.338 6.338 2 C -0.169 4.169 3 Si 0.580 3.420 4 C -0.236 4.236 5 C -0.007 4.007 6 N -0.253 5.253 7 C 0.173 3.827 8 N -0.320 5.320 9 C 0.120 3.880 10 C -0.129 4.129 11 C 0.086 3.914 12 F -0.111 7.111 13 C -0.172 4.172 14 C -0.104 4.104 15 C -0.147 4.147 16 C -0.087 4.087 17 C -0.233 4.233 18 C 0.026 3.974 19 H 0.094 0.906 20 O -0.353 6.353 21 C -0.162 4.162 22 C -0.260 4.260 23 C -0.036 4.036 24 H 0.222 0.778 25 H 0.133 0.867 26 H -0.181 1.181 27 H -0.184 1.184 28 H 0.172 0.828 29 H 0.253 0.747 30 H 0.156 0.844 31 H 0.153 0.847 32 H 0.149 0.851 33 H 0.151 0.849 34 H 0.098 0.902 35 H 0.135 0.865 36 H 0.232 0.768 37 H 0.131 0.869 38 H 0.107 0.893 39 H 0.157 0.843 40 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges 2.560 -1.963 -0.247 3.235 hybrid contribution -2.060 -0.576 0.502 2.197 sum 0.500 -2.539 0.255 2.600 Atomic orbital electron populations 1.86593 1.18008 1.79930 1.49282 1.24749 0.83663 1.10503 0.98005 0.95137 0.91701 0.74792 0.80365 1.20903 1.06911 0.95917 0.99917 1.22253 0.91734 0.99012 0.87688 1.67171 1.25987 1.08694 1.23457 1.18291 0.89394 0.88346 0.86664 1.44001 1.60128 1.06996 1.20879 1.19724 0.97089 0.79994 0.91231 1.19817 1.02790 0.92539 0.97752 1.17330 0.97471 0.90948 0.85638 1.91390 1.78667 1.85798 1.55198 1.21164 1.01935 1.00834 0.93259 1.21110 0.96279 0.95215 0.97747 1.21247 1.00673 0.93952 0.98827 1.21116 0.95112 1.00366 0.92060 1.24596 0.96703 1.04793 0.97205 1.22575 0.96485 0.84577 0.93778 0.90598 1.86431 1.41247 1.28322 1.79346 1.23406 0.97818 1.02728 0.92219 1.21897 1.05529 1.01785 0.96769 1.21159 0.93422 0.93308 0.95705 0.77762 0.86653 1.18098 1.18357 0.82847 0.74672 0.84370 0.84722 0.85078 0.84883 0.90153 0.86501 0.76797 0.86896 0.89270 0.84294 0.84905 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.81 12.84 -35.23 -0.45 -1.26 16 2 C -0.06 0.00 2.82 36.01 0.10 0.10 16 3 Si 0.68 -0.45 29.91 -169.99 -5.08 -5.54 16 4 C -0.23 -0.18 5.36 -104.46 -0.56 -0.74 16 5 C 0.15 0.22 9.84 -17.57 -0.17 0.05 16 6 N -0.54 -1.62 10.39 -12.44 -0.13 -1.75 16 7 C 0.41 0.86 5.87 -155.03 -0.91 -0.05 16 8 N -0.69 -0.73 4.56 -48.05 -0.22 -0.95 16 9 C 0.21 0.01 0.87 -132.16 -0.12 -0.10 16 10 C -0.13 -0.03 3.36 -104.56 -0.35 -0.38 16 11 C 0.11 0.02 6.72 -39.41 -0.26 -0.25 16 12 F -0.13 -0.04 12.93 2.25 0.03 -0.01 16 13 C -0.15 0.12 10.03 -39.51 -0.40 -0.28 16 14 C -0.09 0.12 10.04 -39.60 -0.40 -0.28 16 15 C -0.13 0.12 10.04 -39.58 -0.40 -0.28 16 16 C -0.07 -0.01 6.60 -39.60 -0.26 -0.27 16 17 C -0.19 0.05 6.74 -25.92 -0.17 -0.12 16 18 C 0.09 -0.07 5.28 -25.92 -0.14 -0.21 16 19 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 20 O -0.55 0.07 12.91 -35.23 -0.45 -0.38 16 21 C -0.12 0.08 6.87 -25.92 -0.18 -0.10 16 22 C -0.24 -0.33 6.70 -39.22 -0.26 -0.59 16 23 C -0.01 -0.01 9.83 -39.32 -0.39 -0.40 16 24 H 0.37 -0.38 8.70 45.56 0.40 0.02 16 25 H 0.12 -0.10 7.96 -51.93 -0.41 -0.51 16 26 H -0.26 -0.65 7.11 56.52 0.40 -0.25 16 27 H -0.26 -0.35 7.01 56.52 0.40 0.05 16 28 H 0.15 -0.04 4.85 -52.49 -0.25 -0.29 16 29 H 0.41 0.61 8.54 -40.82 -0.35 0.26 16 30 H 0.14 -0.30 8.06 -52.48 -0.42 -0.73 16 31 H 0.13 -0.46 8.06 -52.48 -0.42 -0.88 16 32 H 0.13 -0.31 8.06 -52.49 -0.42 -0.73 16 33 H 0.13 0.14 5.43 -52.49 -0.29 -0.15 16 34 H 0.08 0.07 8.14 -51.93 -0.42 -0.35 16 35 H 0.12 -0.05 5.23 -51.92 -0.27 -0.32 16 36 H 0.38 -1.28 9.12 45.56 0.42 -0.87 16 37 H 0.11 -0.14 6.93 -51.93 -0.36 -0.50 16 38 H 0.09 -0.03 8.12 -51.93 -0.42 -0.46 16 39 H 0.14 0.18 4.77 -52.49 -0.25 -0.07 16 40 H 0.13 0.03 8.06 -52.49 -0.42 -0.40 16 LS Contribution 322.79 15.07 4.86 4.86 Total: 0.00 -5.84 322.79 -9.84 -15.68 By element: Atomic # 1 Polarization: -3.22 SS G_CDS: -3.53 Total: -6.75 kcal Atomic # 6 Polarization: 0.97 SS G_CDS: -4.86 Total: -3.90 kcal Atomic # 7 Polarization: -2.35 SS G_CDS: -0.35 Total: -2.70 kcal Atomic # 8 Polarization: -0.74 SS G_CDS: -0.91 Total: -1.65 kcal Atomic # 9 Polarization: -0.04 SS G_CDS: 0.03 Total: -0.01 kcal Atomic # 14 Polarization: -0.45 SS G_CDS: -5.08 Total: -5.54 kcal Total LS contribution 4.86 Total: 4.86 kcal Total: -5.84 -9.84 -15.68 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17639086_13915762.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 23.085 kcal (2) G-P(sol) polarization free energy of solvation -5.838 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 17.247 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.842 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.681 kcal (6) G-S(sol) free energy of system = (1) + (5) 7.404 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds