Wall clock time and date at job start Mon Mar 8 2021 10:51:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86297 * 109.47005 * 2 1 4 4 C 1.50696 * 109.47192 * 120.00044 * 2 1 3 5 5 C 1.37988 * 120.32520 * 245.00500 * 4 2 1 6 6 N 1.32011 * 120.89866 * 180.28095 * 5 4 2 7 7 C 1.32332 * 121.64639 * 359.46597 * 6 5 4 8 8 N 1.39143 * 119.72027 * 180.29138 * 7 6 5 9 9 C 1.46499 * 119.99665 * 0.23378 * 8 7 6 10 10 C 1.50701 * 112.85043 * 48.80403 * 9 8 7 11 11 C 1.38434 * 120.01402 * 189.38789 * 10 9 8 12 12 F 1.35101 * 120.02565 * 0.02562 * 11 10 9 13 13 C 1.38485 * 119.95045 * 179.76811 * 11 10 9 14 14 C 1.38179 * 119.97101 * 0.48575 * 13 11 10 15 15 C 1.38270 * 120.02709 * 359.79237 * 14 13 11 16 16 C 1.38220 * 120.01345 * 9.66587 * 10 9 8 17 17 C 1.53776 * 113.61739 * 277.49793 * 9 8 7 18 18 C 1.53788 * 87.08116 * 270.88547 * 17 9 8 19 19 H 1.08997 * 113.69115 * 220.01086 * 18 17 9 20 20 O 1.42892 * 113.61483 * 89.11522 * 18 17 9 21 21 C 1.53780 * 113.61492 * 179.97438 * 9 8 7 22 22 C 1.39349 * 120.56336 * 0.52848 * 7 6 5 23 23 F 1.35103 * 120.46772 * 179.72024 * 22 7 6 24 24 C 1.38444 * 119.05746 * 359.74729 * 22 7 6 25 25 H 0.96695 * 114.00388 * 299.99569 * 1 2 3 26 26 H 1.09002 * 109.46776 * 240.00108 * 2 1 3 27 27 H 1.48509 * 109.99847 * 300.00255 * 3 2 1 28 28 H 1.48507 * 110.00153 * 61.31601 * 3 2 1 29 29 H 1.08002 * 119.54703 * 359.97438 * 5 4 2 30 30 H 0.96999 * 120.00259 * 180.23353 * 8 7 6 31 31 H 1.07997 * 120.01843 * 180.24905 * 13 11 10 32 32 H 1.08003 * 119.98799 * 179.76849 * 14 13 11 33 33 H 1.07996 * 119.97868 * 179.97438 * 15 14 13 34 34 H 1.08004 * 119.98911 * 359.97438 * 16 10 9 35 35 H 1.09001 * 113.61489 * 25.42756 * 17 9 8 36 36 H 1.09005 * 113.61605 * 156.33860 * 17 9 8 37 37 H 0.96700 * 114.00206 * 82.51034 * 20 18 17 38 38 H 1.09005 * 113.61793 * 203.66442 * 21 9 8 39 39 H 1.08995 * 113.61596 * 334.57445 * 21 9 8 40 40 H 1.07997 * 120.75318 * 180.02562 * 24 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.6381 -0.0201 2.1938 6 7 3.0882 -0.6322 3.2733 7 6 2.8733 -1.9214 3.4809 8 7 3.3609 -2.5248 4.6360 9 6 4.1041 -1.7321 5.6186 10 6 3.4059 -0.4472 5.9827 11 6 4.0606 0.5046 6.7454 12 9 5.3260 0.2825 7.1633 13 6 3.4195 1.6870 7.0752 14 6 2.1236 1.9110 6.6512 15 6 1.4685 0.9571 5.8943 16 6 2.1094 -0.2211 5.5601 17 6 5.5898 -1.5495 5.2661 18 6 5.8524 -2.8525 6.0394 19 1 6.7598 -2.8284 6.6428 20 8 5.7541 -4.0272 5.2318 21 6 4.5736 -2.5442 6.8371 22 6 2.1672 -2.6809 2.5501 23 9 1.9538 -3.9982 2.7613 24 6 1.6879 -2.0666 1.4058 25 1 -0.3934 0.4416 0.7650 26 1 1.7923 -0.5138 -0.8900 27 1 1.5614 2.4679 -1.2085 28 1 1.5878 2.4586 1.2242 29 1 2.8299 1.0344 2.0603 30 1 3.2087 -3.4702 4.7906 31 1 3.9306 2.4320 7.6667 32 1 1.6219 2.8314 6.9114 33 1 0.4556 1.1328 5.5636 34 1 1.5969 -0.9652 4.9685 35 1 5.7979 -1.6257 4.1988 36 1 6.0426 -0.6705 5.7250 37 1 6.5551 -4.2263 4.7279 38 1 4.7488 -1.9372 7.7254 39 1 3.9615 -3.4234 7.0380 40 1 1.1368 -2.6290 0.6666 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_17639086_17656566.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:51:34 Heat of formation + Delta-G solvation = -38.322518 kcal Electronic energy + Delta-G solvation = -30246.783466 eV Core-core repulsion = 25859.454581 eV Total energy + Delta-G solvation = -4387.328884 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 335.112 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -50.00512 -49.82672 -42.03039 -40.78834 -39.36754 -38.11795 -36.60503 -34.82270 -33.17762 -31.98474 -31.28238 -31.06354 -27.10460 -26.74622 -25.78512 -24.77213 -23.47795 -23.10479 -22.47785 -20.73004 -19.50200 -18.84753 -18.37785 -18.23607 -18.10355 -17.61856 -17.30083 -16.99861 -16.87709 -16.64228 -16.25408 -16.14238 -15.92532 -15.48703 -15.39337 -15.29832 -15.11456 -14.56879 -14.35182 -14.16088 -14.02836 -13.77036 -13.60439 -13.46010 -13.33334 -12.95118 -12.68645 -12.50199 -12.29765 -12.06010 -11.89908 -11.82278 -11.25117 -10.83769 -10.71914 -10.61580 -10.55686 -9.70010 -9.53880 -8.76230 -5.01664 -0.06593 0.09890 0.21214 0.36401 1.20986 1.52539 1.86625 1.90913 2.51508 2.66508 2.95177 3.06131 3.21917 3.30876 3.34898 3.41898 3.50446 3.56105 3.63877 3.77752 3.83418 3.86163 3.99451 4.08018 4.25803 4.33067 4.43664 4.43761 4.50448 4.62153 4.66287 4.71656 4.85951 4.90303 4.95411 4.98642 5.01290 5.09369 5.16367 5.38258 5.42417 5.50256 5.94493 6.00855 6.19687 6.34575 6.59776 6.98994 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.529 6.529 2 C -0.060 4.060 3 Si 0.681 3.319 4 C -0.206 4.206 5 C 0.143 3.857 6 N -0.497 5.497 7 C 0.389 3.611 8 N -0.685 5.685 9 C 0.213 3.787 10 C -0.092 4.092 11 C 0.104 3.896 12 F -0.135 7.135 13 C -0.153 4.153 14 C -0.091 4.091 15 C -0.133 4.133 16 C -0.054 4.054 17 C -0.181 4.181 18 C 0.081 3.919 19 H 0.075 0.925 20 O -0.550 6.550 21 C -0.129 4.129 22 C -0.019 4.019 23 F -0.132 7.132 24 C -0.039 4.039 25 H 0.376 0.624 26 H 0.119 0.881 27 H -0.254 1.254 28 H -0.256 1.256 29 H 0.161 0.839 30 H 0.421 0.579 31 H 0.135 0.865 32 H 0.131 0.869 33 H 0.124 0.876 34 H 0.119 0.881 35 H 0.079 0.921 36 H 0.116 0.884 37 H 0.384 0.616 38 H 0.113 0.887 39 H 0.086 0.914 40 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.065 1.759 0.710 2.804 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.171 4.171 3 Si 0.581 3.419 4 C -0.212 4.212 5 C -0.015 4.015 6 N -0.213 5.213 7 C 0.151 3.849 8 N -0.318 5.318 9 C 0.125 3.875 10 C -0.094 4.094 11 C 0.084 3.916 12 F -0.114 7.114 13 C -0.172 4.172 14 C -0.109 4.109 15 C -0.151 4.151 16 C -0.072 4.072 17 C -0.220 4.220 18 C 0.022 3.978 19 H 0.093 0.907 20 O -0.356 6.356 21 C -0.167 4.167 22 C -0.046 4.046 23 F -0.111 7.111 24 C -0.065 4.065 25 H 0.223 0.777 26 H 0.137 0.863 27 H -0.178 1.178 28 H -0.180 1.180 29 H 0.178 0.822 30 H 0.260 0.740 31 H 0.153 0.847 32 H 0.149 0.851 33 H 0.142 0.858 34 H 0.137 0.863 35 H 0.097 0.903 36 H 0.134 0.866 37 H 0.232 0.768 38 H 0.131 0.869 39 H 0.104 0.896 40 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges 1.955 2.752 1.190 3.579 hybrid contribution -0.907 -1.253 -0.290 1.573 sum 1.049 1.499 0.900 2.039 Atomic orbital electron populations 1.86618 1.17712 1.79926 1.49305 1.24806 0.83872 1.10715 0.97722 0.95047 0.91669 0.74434 0.80711 1.20840 1.05856 0.94488 0.99973 1.22415 0.91928 0.99612 0.87556 1.67662 1.24375 1.06921 1.22378 1.18400 0.90602 0.89044 0.86828 1.44156 1.58351 1.11703 1.17574 1.19676 0.90326 0.88327 0.89199 1.19543 0.95164 0.95575 0.99123 1.17304 0.79825 0.95241 0.99232 1.91375 1.37009 1.94751 1.88228 1.21083 0.96296 0.96525 1.03289 1.20996 0.93753 0.99322 0.96844 1.21157 1.00344 0.94192 0.99444 1.20759 0.93144 0.97028 0.96312 1.24429 0.94975 1.00080 1.02485 1.22662 0.97919 0.84889 0.92331 0.90683 1.86401 1.42716 1.43780 1.62736 1.23475 0.96482 1.00262 0.96448 1.17990 1.08661 0.79563 0.98349 1.91504 1.93626 1.31124 1.94884 1.21265 0.95724 0.94415 0.95091 0.77669 0.86282 1.17832 1.18030 0.82220 0.73958 0.84675 0.85140 0.85819 0.86299 0.90274 0.86622 0.76794 0.86901 0.89566 0.83381 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.17 12.84 -35.23 -0.45 -0.62 16 2 C -0.06 0.07 2.82 36.00 0.10 0.17 16 3 Si 0.68 -1.20 29.91 -169.99 -5.08 -6.28 16 4 C -0.21 0.10 5.36 -104.47 -0.56 -0.46 16 5 C 0.14 -0.02 9.84 -17.57 -0.17 -0.19 16 6 N -0.50 -0.67 6.60 -12.36 -0.08 -0.75 16 7 C 0.39 0.60 5.41 -154.86 -0.84 -0.23 16 8 N -0.68 -0.68 4.54 -47.97 -0.22 -0.90 16 9 C 0.21 0.15 1.08 -132.16 -0.14 0.01 16 10 C -0.09 -0.13 4.50 -104.56 -0.47 -0.60 16 11 C 0.10 0.14 6.71 -39.42 -0.26 -0.12 16 12 F -0.14 -0.18 12.93 2.25 0.03 -0.15 16 13 C -0.15 -0.07 10.03 -39.51 -0.40 -0.47 16 14 C -0.09 0.01 10.04 -39.59 -0.40 -0.39 16 15 C -0.13 -0.06 10.04 -39.58 -0.40 -0.46 16 16 C -0.05 -0.08 7.20 -39.59 -0.29 -0.36 16 17 C -0.18 -0.07 6.92 -25.92 -0.18 -0.25 16 18 C 0.08 -0.04 5.28 -25.88 -0.14 -0.18 16 19 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 20 O -0.55 0.10 12.91 -35.23 -0.45 -0.36 16 21 C -0.13 0.02 6.87 -25.89 -0.18 -0.16 16 22 C -0.02 -0.03 7.35 -39.09 -0.29 -0.32 16 23 F -0.13 -0.35 16.65 2.25 0.04 -0.32 16 24 C -0.04 -0.02 9.82 -39.26 -0.39 -0.41 16 25 H 0.38 -0.92 8.70 45.56 0.40 -0.53 16 26 H 0.12 -0.22 7.96 -51.93 -0.41 -0.63 16 27 H -0.25 -0.41 7.11 56.52 0.40 -0.01 16 28 H -0.26 0.03 7.01 56.52 0.40 0.43 16 29 H 0.16 -0.27 4.84 -52.49 -0.25 -0.53 16 30 H 0.42 0.40 7.89 -40.82 -0.32 0.08 16 31 H 0.14 -0.15 8.06 -52.49 -0.42 -0.57 16 32 H 0.13 -0.27 8.06 -52.48 -0.42 -0.70 16 33 H 0.12 -0.13 8.06 -52.49 -0.42 -0.55 16 34 H 0.12 0.22 5.54 -52.48 -0.29 -0.07 16 35 H 0.08 0.11 8.14 -51.93 -0.42 -0.31 16 36 H 0.12 0.07 5.25 -51.93 -0.27 -0.20 16 37 H 0.38 -1.33 9.12 45.56 0.42 -0.91 16 38 H 0.11 -0.06 6.90 -51.93 -0.36 -0.42 16 39 H 0.09 0.00 8.12 -51.93 -0.42 -0.43 16 40 H 0.15 -0.04 8.06 -52.49 -0.42 -0.46 16 LS Contribution 332.59 15.07 5.01 5.01 Total: 0.00 -5.67 332.59 -9.46 -15.13 By element: Atomic # 1 Polarization: -3.09 SS G_CDS: -3.26 Total: -6.35 kcal Atomic # 6 Polarization: 0.58 SS G_CDS: -4.99 Total: -4.41 kcal Atomic # 7 Polarization: -1.35 SS G_CDS: -0.30 Total: -1.65 kcal Atomic # 8 Polarization: -0.08 SS G_CDS: -0.91 Total: -0.98 kcal Atomic # 9 Polarization: -0.53 SS G_CDS: 0.07 Total: -0.46 kcal Atomic # 14 Polarization: -1.20 SS G_CDS: -5.08 Total: -6.28 kcal Total LS contribution 5.01 Total: 5.01 kcal Total: -5.67 -9.46 -15.13 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17639086_17656566.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -23.196 kcal (2) G-P(sol) polarization free energy of solvation -5.666 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -28.862 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.461 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.127 kcal (6) G-S(sol) free energy of system = (1) + (5) -38.323 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds