Wall clock time and date at job start Mon Mar 8 2021 08:05:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86302 * 109.47375 * 2 1 4 4 C 1.50698 * 109.47059 * 239.99593 * 2 1 3 5 5 C 1.37990 * 120.32542 * 120.02432 * 4 2 1 6 6 N 1.32003 * 120.89834 * 179.72101 * 5 4 2 7 7 C 1.32337 * 121.65133 * 0.52338 * 6 5 4 8 8 N 1.39138 * 119.72081 * 179.75121 * 7 6 5 9 9 C 1.46500 * 120.00284 * 359.72829 * 8 7 6 10 10 C 1.53001 * 109.47299 * 179.97438 * 9 8 7 11 11 F 1.39904 * 109.46640 * 60.00440 * 10 9 8 12 12 C 1.53000 * 109.46886 * 179.97438 * 10 9 8 13 13 C 1.52997 * 109.47060 * 180.02562 * 12 10 9 14 14 C 1.53006 * 109.47127 * 300.00449 * 13 12 10 15 15 H 1.09001 * 109.47002 * 299.99574 * 14 13 12 16 16 C 1.52997 * 109.47127 * 179.97438 * 14 13 12 17 17 O 1.42899 * 109.47457 * 64.99652 * 16 14 13 18 18 C 1.52997 * 109.47164 * 59.99836 * 14 13 12 19 19 C 1.52996 * 109.47302 * 300.00141 * 10 9 8 20 20 C 1.39345 * 120.55788 * 359.47973 * 7 6 5 21 21 F 1.35102 * 120.46861 * 180.27631 * 20 7 6 22 22 C 1.38440 * 119.05794 * 0.25258 * 20 7 6 23 23 H 0.96706 * 113.99912 * 60.00241 * 1 2 3 24 24 H 1.09009 * 109.47098 * 119.99554 * 2 1 3 25 25 H 1.48503 * 109.99833 * 298.68104 * 3 2 1 26 26 H 1.48501 * 109.99896 * 59.99750 * 3 2 1 27 27 H 1.08000 * 119.54559 * 359.97438 * 5 4 2 28 28 H 0.97003 * 119.99732 * 179.72879 * 8 7 6 29 29 H 1.09001 * 109.46596 * 59.99722 * 9 8 7 30 30 H 1.09002 * 109.47129 * 300.00078 * 9 8 7 31 31 H 1.09002 * 109.47398 * 300.00496 * 12 10 9 32 32 H 1.09001 * 109.47194 * 60.00677 * 12 10 9 33 33 H 1.08998 * 109.47533 * 59.99948 * 13 12 10 34 34 H 1.08996 * 109.47853 * 180.02562 * 13 12 10 35 35 H 1.09004 * 109.47346 * 184.99897 * 16 14 13 36 36 H 1.09002 * 109.47196 * 304.99671 * 16 14 13 37 37 H 0.96696 * 114.00139 * 179.97438 * 17 16 14 38 38 H 1.09002 * 109.47045 * 180.02562 * 18 14 13 39 39 H 1.09001 * 109.47375 * 59.99966 * 18 14 13 40 40 H 1.08992 * 109.47554 * 299.99692 * 19 10 9 41 41 H 1.09004 * 109.47108 * 59.99942 * 19 10 9 42 42 H 1.08002 * 120.75817 * 180.02562 * 22 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 2.7254 -0.0466 -2.1429 6 7 3.1761 -0.6595 -3.2217 7 6 2.8795 -1.9236 -3.4771 8 7 3.3722 -2.5286 -4.6292 9 6 4.2107 -1.7647 -5.5564 10 6 4.6163 -2.6575 -6.7309 11 9 3.4689 -3.1012 -7.3972 12 6 5.4914 -1.8595 -7.6995 13 6 5.8965 -2.7520 -8.8743 14 6 6.6815 -3.9571 -8.3523 15 1 7.5756 -3.6114 -7.8335 16 6 7.0860 -4.8500 -9.5270 17 8 7.9964 -4.1428 -10.3714 18 6 5.8063 -4.7551 -7.3837 19 6 5.4009 -3.8625 -6.2084 20 6 2.0825 -2.6556 -2.5993 21 9 1.7853 -3.9477 -2.8590 22 6 1.5999 -2.0402 -1.4569 23 1 -0.3933 0.4417 -0.7651 24 1 1.7923 -0.5138 0.8901 25 1 1.5879 2.4585 -1.2243 26 1 1.5615 2.4679 1.2085 27 1 2.9850 0.9874 -1.9700 28 1 3.1605 -3.4561 -4.8184 29 1 5.1047 -1.4193 -5.0373 30 1 3.6518 -0.9060 -5.9283 31 1 4.9321 -1.0011 -8.0717 32 1 6.3854 -1.5133 -7.1807 33 1 5.0025 -3.0978 -9.3931 34 1 6.5204 -2.1837 -9.5642 35 1 7.5671 -5.7521 -9.1490 36 1 6.1987 -5.1235 -10.0980 37 1 8.2961 -4.6496 -11.1385 38 1 6.3656 -5.6134 -7.0115 39 1 4.9121 -5.1008 -7.9024 40 1 6.2947 -3.5168 -5.6893 41 1 4.7770 -4.4309 -5.5185 42 1 0.9802 -2.5818 -0.7576 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_17664724_17656566.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:05:56 Heat of formation + Delta-G solvation = -143.575331 kcal Electronic energy + Delta-G solvation = -26751.682960 eV Core-core repulsion = 22561.619295 eV Total energy + Delta-G solvation = -4190.063665 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 315.143 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -49.87037 -48.79208 -41.41200 -39.74564 -38.37171 -37.52664 -36.50264 -33.54444 -32.99134 -32.09456 -31.19489 -28.43280 -26.40690 -25.43572 -24.24448 -23.91889 -22.85388 -21.82788 -20.82915 -19.53329 -18.60685 -18.34110 -18.33411 -17.64930 -17.29684 -16.95735 -16.73391 -16.56893 -16.15640 -15.90366 -15.81227 -15.69064 -15.46235 -15.23118 -15.03877 -14.44778 -14.33841 -14.32036 -14.00717 -13.86446 -13.75784 -13.44843 -13.27873 -13.11349 -12.80555 -12.69195 -12.24218 -12.13918 -12.05445 -11.65322 -11.47430 -11.29019 -11.16799 -10.90086 -10.81868 -10.65802 -10.55244 -8.80478 -5.02106 -0.07970 0.10985 1.20977 1.53976 1.86927 1.92036 2.54197 3.02133 3.03399 3.17035 3.24291 3.32236 3.36041 3.46575 3.54071 3.57652 3.79539 3.82600 3.92354 4.00879 4.11564 4.20182 4.29463 4.33316 4.41721 4.43668 4.44819 4.48506 4.54792 4.64007 4.69383 4.73202 4.81021 4.84729 4.93371 4.95834 5.00544 5.14484 5.25458 5.31341 5.37311 5.85407 6.09573 6.34326 6.63053 6.91377 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.062 4.062 3 Si 0.682 3.318 4 C -0.208 4.208 5 C 0.149 3.851 6 N -0.512 5.512 7 C 0.391 3.609 8 N -0.715 5.715 9 C 0.115 3.885 10 C 0.111 3.889 11 F -0.201 7.201 12 C -0.136 4.136 13 C -0.111 4.111 14 C -0.089 4.089 15 H 0.080 0.920 16 C 0.079 3.921 17 O -0.573 6.573 18 C -0.116 4.116 19 C -0.137 4.137 20 C -0.019 4.019 21 F -0.133 7.133 22 C -0.037 4.037 23 H 0.377 0.623 24 H 0.120 0.880 25 H -0.256 1.256 26 H -0.254 1.254 27 H 0.164 0.836 28 H 0.414 0.586 29 H 0.087 0.913 30 H 0.080 0.920 31 H 0.080 0.920 32 H 0.085 0.915 33 H 0.067 0.933 34 H 0.079 0.921 35 H 0.046 0.954 36 H 0.046 0.954 37 H 0.381 0.619 38 H 0.072 0.928 39 H 0.072 0.928 40 H 0.086 0.914 41 H 0.075 0.925 42 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.765 -0.348 -0.486 3.812 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.172 4.172 3 Si 0.583 3.417 4 C -0.213 4.213 5 C -0.008 4.008 6 N -0.230 5.230 7 C 0.153 3.847 8 N -0.349 5.349 9 C -0.010 4.010 10 C 0.092 3.908 11 F -0.182 7.182 12 C -0.174 4.174 13 C -0.149 4.149 14 C -0.107 4.107 15 H 0.099 0.901 16 C 0.001 3.999 17 O -0.379 6.379 18 C -0.153 4.153 19 C -0.174 4.174 20 C -0.045 4.045 21 F -0.112 7.112 22 C -0.064 4.064 23 H 0.224 0.776 24 H 0.138 0.862 25 H -0.181 1.181 26 H -0.178 1.178 27 H 0.181 0.819 28 H 0.253 0.747 29 H 0.105 0.895 30 H 0.098 0.902 31 H 0.098 0.902 32 H 0.104 0.896 33 H 0.086 0.914 34 H 0.097 0.903 35 H 0.064 0.936 36 H 0.065 0.935 37 H 0.228 0.772 38 H 0.091 0.909 39 H 0.091 0.909 40 H 0.105 0.895 41 H 0.093 0.907 42 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 4.148 1.145 -0.240 4.310 hybrid contribution -1.799 -1.812 -0.510 2.604 sum 2.349 -0.667 -0.750 2.554 Atomic orbital electron populations 1.86611 1.17693 1.79930 1.49387 1.24835 0.83913 1.10799 0.97660 0.95149 0.91531 0.74257 0.80789 1.20876 1.04873 0.95116 1.00443 1.22342 0.91629 0.99132 0.87745 1.67301 1.26474 1.07324 1.21859 1.18389 0.90183 0.89128 0.87027 1.44426 1.54890 1.14818 1.20767 1.21908 0.95927 0.94246 0.88906 1.21237 0.83145 0.94988 0.91429 1.92874 1.52136 1.90866 1.82331 1.22064 1.00000 0.98684 0.96641 1.21498 1.00297 0.95933 0.97128 1.21182 0.98812 0.95702 0.95034 0.90146 1.22206 0.92128 0.93952 0.91576 1.86459 1.65193 1.45315 1.40940 1.21515 1.00186 0.98019 0.95614 1.22101 1.00922 0.95868 0.98545 1.17990 1.06746 0.80957 0.98809 1.91497 1.92185 1.33544 1.93977 1.21279 0.96160 0.94276 0.94644 0.77555 0.86175 1.18077 1.17839 0.81948 0.74750 0.89467 0.90194 0.90160 0.89589 0.91388 0.90274 0.93556 0.93529 0.77193 0.90928 0.90940 0.89526 0.90669 0.83230 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.25 12.78 -35.23 -0.45 -0.70 16 2 C -0.06 0.07 2.84 36.00 0.10 0.17 16 3 Si 0.68 -1.33 29.82 -169.99 -5.07 -6.40 16 4 C -0.21 0.07 5.40 -104.47 -0.56 -0.50 16 5 C 0.15 -0.02 9.84 -17.57 -0.17 -0.19 16 6 N -0.51 -0.82 9.57 -12.37 -0.12 -0.94 16 7 C 0.39 0.68 7.49 -154.86 -1.16 -0.48 16 8 N -0.71 -0.35 5.34 -60.34 -0.32 -0.67 16 9 C 0.11 -0.07 4.90 -4.04 -0.02 -0.09 16 10 C 0.11 -0.10 0.85 -90.62 -0.08 -0.18 16 11 F -0.20 -0.33 15.63 2.25 0.04 -0.30 16 12 C -0.14 0.19 5.00 -26.73 -0.13 0.05 16 13 C -0.11 0.05 4.98 -26.73 -0.13 -0.09 16 14 C -0.09 0.08 2.43 -90.62 -0.22 -0.14 16 15 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 16 C 0.08 -0.07 6.43 37.16 0.24 0.17 16 17 O -0.57 -0.13 13.19 -35.23 -0.46 -0.59 16 18 C -0.12 0.18 5.08 -26.71 -0.14 0.04 16 19 C -0.14 0.24 4.83 -26.71 -0.13 0.11 16 20 C -0.02 -0.03 7.35 -39.10 -0.29 -0.32 16 21 F -0.13 -0.34 16.65 2.25 0.04 -0.30 16 22 C -0.04 -0.03 9.75 -39.26 -0.38 -0.41 16 23 H 0.38 -0.83 8.70 45.56 0.40 -0.44 16 24 H 0.12 -0.24 7.96 -51.92 -0.41 -0.65 16 25 H -0.26 0.01 7.11 56.52 0.40 0.41 16 26 H -0.25 -0.38 7.11 56.52 0.40 0.02 16 27 H 0.16 -0.39 4.88 -52.49 -0.26 -0.65 16 28 H 0.41 0.03 6.73 -40.82 -0.27 -0.24 16 29 H 0.09 -0.11 8.14 -51.93 -0.42 -0.53 16 30 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 31 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 32 H 0.09 -0.20 8.14 -51.93 -0.42 -0.63 16 33 H 0.07 0.03 7.80 -51.93 -0.41 -0.37 16 34 H 0.08 0.03 7.82 -51.93 -0.41 -0.37 16 35 H 0.05 -0.08 8.14 -51.93 -0.42 -0.50 16 36 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 37 H 0.38 -1.42 9.12 45.56 0.42 -1.00 16 38 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 39 H 0.07 -0.05 7.80 -51.93 -0.41 -0.46 16 40 H 0.09 -0.21 8.14 -51.93 -0.42 -0.64 16 41 H 0.07 -0.13 6.86 -51.93 -0.36 -0.49 16 42 H 0.15 -0.03 8.06 -52.49 -0.42 -0.45 16 LS Contribution 343.35 15.07 5.17 5.17 Total: 0.00 -6.60 343.35 -9.38 -15.98 By element: Atomic # 1 Polarization: -4.31 SS G_CDS: -5.13 Total: -9.44 kcal Atomic # 6 Polarization: 1.24 SS G_CDS: -3.07 Total: -1.83 kcal Atomic # 7 Polarization: -1.17 SS G_CDS: -0.44 Total: -1.61 kcal Atomic # 8 Polarization: -0.37 SS G_CDS: -0.92 Total: -1.29 kcal Atomic # 9 Polarization: -0.67 SS G_CDS: 0.07 Total: -0.60 kcal Atomic # 14 Polarization: -1.33 SS G_CDS: -5.07 Total: -6.40 kcal Total LS contribution 5.17 Total: 5.17 kcal Total: -6.60 -9.38 -15.98 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_17664724_17656566.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -127.593 kcal (2) G-P(sol) polarization free energy of solvation -6.601 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -134.194 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.382 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.982 kcal (6) G-S(sol) free energy of system = (1) + (5) -143.575 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds