Wall clock time and date at job start Mon Mar 8 2021 07:28:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86303 * 109.47001 * 2 1 4 4 C 1.50701 * 109.46878 * 240.00088 * 2 1 3 5 5 C 1.38608 * 120.71790 * 119.72427 * 4 2 1 6 6 N 1.32272 * 119.19347 * 179.72218 * 5 4 2 7 7 C 1.32491 * 120.74469 * 0.55821 * 6 5 4 8 8 N 1.38404 * 119.22247 * 179.73048 * 7 6 5 9 9 C 1.46496 * 119.99649 * 359.97438 * 8 7 6 10 10 H 1.09000 * 112.85099 * 336.18897 * 9 8 7 11 11 C 1.53782 * 113.61883 * 107.50403 * 9 8 7 12 12 C 1.53778 * 87.08363 * 139.97623 * 11 9 8 13 13 H 1.09006 * 113.68716 * 89.12631 * 12 11 9 14 14 C 1.50700 * 113.61042 * 220.01316 * 12 11 9 15 15 N 1.30174 * 126.79707 * 192.51997 * 14 12 11 16 16 O 1.20925 * 111.60201 * 179.97438 * 15 14 12 17 17 C 1.34045 * 111.56684 * 359.97438 * 16 15 14 18 18 C 1.35448 * 106.44509 * 359.75307 * 17 16 15 19 19 C 1.53774 * 87.08316 * 334.56584 * 12 11 9 20 20 N 1.32498 * 121.56363 * 359.71215 * 7 6 5 21 21 C 1.32277 * 120.73621 * 359.97438 * 20 7 6 22 22 H 0.96700 * 114.00234 * 59.99634 * 1 2 3 23 23 H 1.09002 * 109.47382 * 120.00154 * 2 1 3 24 24 H 1.48491 * 110.00200 * 298.68284 * 3 2 1 25 25 H 1.48502 * 109.99951 * 60.00423 * 3 2 1 26 26 H 1.08002 * 120.40125 * 359.97438 * 5 4 2 27 27 H 0.96998 * 120.00395 * 179.97438 * 8 7 6 28 28 H 1.09009 * 113.61031 * 254.52726 * 11 9 8 29 29 H 1.09000 * 113.61517 * 25.42047 * 11 9 8 30 30 H 1.07999 * 126.77798 * 180.02562 * 17 16 15 31 31 H 1.07998 * 128.00975 * 180.23150 * 18 17 16 32 32 H 1.08999 * 113.61859 * 270.88580 * 19 12 11 33 33 H 1.08997 * 113.69490 * 139.99135 * 19 12 11 34 34 H 1.08003 * 120.39880 * 179.97438 * 21 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7243 -0.0495 -2.1555 6 7 3.1532 -0.7038 -3.2221 7 6 2.8237 -1.9723 -3.4164 8 7 3.2853 -2.6249 -4.5463 9 6 4.1274 -1.9128 -5.5106 10 1 3.9906 -0.8320 -5.4751 11 6 5.6014 -2.3504 -5.4825 12 6 5.5790 -2.2493 -7.0168 13 1 5.8405 -1.2608 -7.3945 14 6 6.3331 -3.3574 -7.7058 15 7 6.6728 -3.4059 -8.9615 16 8 7.2725 -4.4233 -9.2214 17 6 7.4123 -5.2029 -8.1400 18 6 6.8179 -4.5468 -7.1149 19 6 4.0634 -2.4954 -6.9325 20 7 2.0630 -2.6311 -2.5545 21 6 1.6061 -2.0372 -1.4645 22 1 -0.3933 0.4417 -0.7650 23 1 1.7924 -0.5139 0.8900 24 1 1.5879 2.4586 -1.2241 25 1 1.5615 2.4679 1.2086 26 1 2.9922 0.9859 -2.0050 27 1 3.0513 -3.5536 -4.6996 28 1 6.2629 -1.6262 -5.0068 29 1 5.7486 -3.3655 -5.1138 30 1 7.9057 -6.1625 -8.0940 31 1 6.7317 -4.8607 -6.0852 32 1 3.7900 -3.5502 -6.9602 33 1 3.4819 -1.8891 -7.6269 34 1 0.9860 -2.5793 -0.7658 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_18339244_12175864.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:28:16 Heat of formation + Delta-G solvation = 125.472680 kcal Electronic energy + Delta-G solvation = -20163.852031 eV Core-core repulsion = 16875.445728 eV Total energy + Delta-G solvation = -3288.406303 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 275.106 amu Computer time = 0.35 seconds Orbital eigenvalues (eV) -45.88456 -42.12512 -40.46704 -38.19531 -36.04823 -34.72702 -34.32559 -32.63994 -32.04184 -27.50887 -26.95032 -26.17346 -25.67736 -24.03770 -23.28410 -22.08493 -20.91381 -19.40111 -19.05752 -18.50795 -18.42870 -18.11635 -16.86505 -16.61044 -16.44669 -16.14291 -15.76373 -15.63292 -15.54654 -14.59271 -14.51560 -14.06779 -13.93824 -13.84001 -13.54827 -13.18024 -12.79296 -12.54077 -12.27165 -12.00412 -11.86107 -11.80360 -11.73381 -11.29115 -10.93601 -10.72965 -10.58403 -10.04377 -9.13253 -5.04778 0.04587 0.14843 0.55155 1.20143 1.22941 1.50859 1.77356 1.90163 2.32277 2.78650 3.03179 3.12427 3.26189 3.29782 3.45431 3.58220 3.62175 3.69221 3.76527 3.80447 3.91636 4.18004 4.19018 4.35936 4.50226 4.52621 4.54634 4.59724 4.63884 4.71104 4.85542 4.86597 4.99375 5.07991 5.31774 5.76486 5.98213 6.32078 6.38312 7.27433 7.31738 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.053 4.053 3 Si 0.678 3.322 4 C -0.292 4.292 5 C 0.199 3.801 6 N -0.562 5.562 7 C 0.567 3.433 8 N -0.684 5.684 9 C 0.142 3.858 10 H 0.125 0.875 11 C -0.141 4.141 12 C -0.033 4.033 13 H 0.113 0.887 14 C 0.029 3.971 15 N -0.363 5.363 16 O 0.099 5.901 17 C -0.055 4.055 18 C -0.233 4.233 19 C -0.134 4.134 20 N -0.569 5.569 21 C 0.223 3.777 22 H 0.376 0.624 23 H 0.120 0.880 24 H -0.257 1.257 25 H -0.253 1.253 26 H 0.167 0.833 27 H 0.415 0.585 28 H 0.082 0.918 29 H 0.090 0.910 30 H 0.217 0.783 31 H 0.171 0.829 32 H 0.090 0.910 33 H 0.084 0.916 34 H 0.170 0.830 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.445 -1.039 1.748 3.180 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.164 4.164 3 Si 0.578 3.422 4 C -0.301 4.301 5 C 0.032 3.968 6 N -0.284 5.284 7 C 0.211 3.789 8 N -0.319 5.319 9 C 0.036 3.964 10 H 0.143 0.857 11 C -0.180 4.180 12 C -0.053 4.053 13 H 0.132 0.868 14 C -0.130 4.130 15 N -0.066 5.066 16 O 0.033 5.967 17 C -0.137 4.137 18 C -0.255 4.255 19 C -0.174 4.174 20 N -0.291 5.291 21 C 0.055 3.945 22 H 0.224 0.776 23 H 0.138 0.862 24 H -0.182 1.182 25 H -0.178 1.178 26 H 0.184 0.816 27 H 0.253 0.747 28 H 0.101 0.899 29 H 0.109 0.891 30 H 0.234 0.766 31 H 0.188 0.812 32 H 0.108 0.892 33 H 0.102 0.898 34 H 0.187 0.813 Dipole moment (debyes) X Y Z Total from point charges 2.609 -0.076 0.262 2.623 hybrid contribution -1.367 -0.692 0.987 1.823 sum 1.242 -0.768 1.249 1.922 Atomic orbital electron populations 1.86610 1.17763 1.79849 1.49376 1.24674 0.83754 1.10516 0.97468 0.95251 0.91515 0.74562 0.80823 1.21658 1.08117 0.98340 1.01949 1.22796 0.88438 0.98891 0.86699 1.67900 1.28249 1.08433 1.23779 1.19437 0.86684 0.85662 0.87108 1.44176 1.53714 1.14383 1.19602 1.22495 0.88945 0.98496 0.86490 0.85692 1.23598 0.97459 1.03216 0.93743 1.20664 0.93925 0.95817 0.94887 0.86848 1.23384 1.01664 0.97793 0.90186 1.73875 1.11402 1.03590 1.17691 1.84873 1.54794 1.22377 1.34676 1.26096 1.02377 0.99458 0.85733 1.22708 1.05071 0.95607 1.02078 1.23437 0.94909 1.02579 0.96434 1.68003 1.16047 1.39373 1.05662 1.22840 0.90217 0.90612 0.90831 0.77638 0.86191 1.18217 1.17760 0.81642 0.74698 0.89898 0.89132 0.76603 0.81181 0.89179 0.89777 0.81254 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.02 12.79 -35.23 -0.45 -0.44 16 2 C -0.05 0.08 2.85 36.01 0.10 0.18 16 3 Si 0.68 -1.44 29.87 -169.99 -5.08 -6.51 16 4 C -0.29 0.15 5.40 -104.35 -0.56 -0.41 16 5 C 0.20 -0.03 9.92 -17.23 -0.17 -0.20 16 6 N -0.56 -0.90 9.13 -13.93 -0.13 -1.03 16 7 C 0.57 1.08 8.42 -322.81 -2.72 -1.64 16 8 N -0.68 0.14 5.50 -55.00 -0.30 -0.16 16 9 C 0.14 -0.19 4.25 -67.11 -0.29 -0.47 16 10 H 0.13 -0.08 7.37 -51.93 -0.38 -0.46 16 11 C -0.14 0.26 7.27 -25.92 -0.19 0.07 16 12 C -0.03 0.03 4.29 -90.96 -0.39 -0.36 16 13 H 0.11 -0.11 8.14 -51.93 -0.42 -0.53 16 14 C 0.03 0.03 6.70 -82.10 -0.55 -0.52 16 15 N -0.36 -1.19 12.07 33.42 0.40 -0.79 16 16 O 0.10 0.19 11.20 17.16 0.19 0.38 16 17 C -0.06 0.08 12.30 29.74 0.37 0.44 16 18 C -0.23 0.21 10.27 -39.38 -0.40 -0.19 16 19 C -0.13 0.21 7.38 -25.92 -0.19 0.02 16 20 N -0.57 -1.30 10.46 -13.93 -0.15 -1.45 16 21 C 0.22 0.14 10.92 -17.23 -0.19 -0.05 16 22 H 0.38 -0.96 8.70 45.56 0.40 -0.56 16 23 H 0.12 -0.29 7.96 -51.93 -0.41 -0.71 16 24 H -0.26 0.04 7.11 56.52 0.40 0.45 16 25 H -0.25 -0.34 7.11 56.52 0.40 0.06 16 26 H 0.17 -0.43 5.04 -52.49 -0.26 -0.69 16 27 H 0.42 -0.50 8.84 -40.82 -0.36 -0.86 16 28 H 0.08 -0.14 8.14 -51.92 -0.42 -0.56 16 29 H 0.09 -0.19 6.62 -51.93 -0.34 -0.54 16 30 H 0.22 -1.20 8.06 -52.49 -0.42 -1.62 16 31 H 0.17 -0.53 7.12 -52.49 -0.37 -0.90 16 32 H 0.09 -0.15 8.07 -51.93 -0.42 -0.57 16 33 H 0.08 -0.12 8.14 -51.93 -0.42 -0.55 16 34 H 0.17 -0.18 8.06 -52.48 -0.42 -0.60 16 LS Contribution 295.47 15.07 4.45 4.45 Total: 0.00 -7.60 295.47 -9.71 -17.31 By element: Atomic # 1 Polarization: -5.17 SS G_CDS: -3.47 Total: -8.64 kcal Atomic # 6 Polarization: 2.06 SS G_CDS: -5.18 Total: -3.13 kcal Atomic # 7 Polarization: -3.26 SS G_CDS: -0.17 Total: -3.43 kcal Atomic # 8 Polarization: 0.20 SS G_CDS: -0.26 Total: -0.06 kcal Atomic # 14 Polarization: -1.44 SS G_CDS: -5.08 Total: -6.51 kcal Total LS contribution 4.45 Total: 4.45 kcal Total: -7.60 -9.71 -17.31 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_18339244_12175864.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 142.787 kcal (2) G-P(sol) polarization free energy of solvation -7.602 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 135.185 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.712 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.314 kcal (6) G-S(sol) free energy of system = (1) + (5) 125.473 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.35 seconds