Wall clock time and date at job start Mon Mar 8 2021 07:28:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86297 * 109.47575 * 2 1 4 4 C 1.50705 * 109.46938 * 239.99931 * 2 1 3 5 5 C 1.38839 * 120.33589 * 299.98070 * 4 2 1 6 6 C 1.38341 * 118.50351 * 179.77046 * 5 4 2 7 7 C 1.39087 * 119.09887 * 0.47441 * 6 5 4 8 8 N 1.39012 * 119.70293 * 179.79542 * 7 6 5 9 9 C 1.46494 * 119.99945 * 359.72310 * 8 7 6 10 10 H 1.08997 * 112.85325 * 336.19245 * 9 8 7 11 11 C 1.53782 * 113.69010 * 107.46699 * 9 8 7 12 12 C 1.53781 * 87.08170 * 139.98870 * 11 9 8 13 13 H 1.09000 * 113.69193 * 89.13006 * 12 11 9 14 14 C 1.50703 * 113.61438 * 220.02019 * 12 11 9 15 15 N 1.30174 * 126.79902 * 192.47634 * 14 12 11 16 16 O 1.20925 * 111.60250 * 179.97438 * 15 14 12 17 17 C 1.34034 * 111.56886 * 359.97438 * 16 15 14 18 18 C 1.35450 * 106.44531 * 359.97438 * 17 16 15 19 19 C 1.53776 * 87.08113 * 334.56607 * 12 11 9 20 20 N 1.32425 * 120.58931 * 359.51444 * 7 6 5 21 21 C 1.31939 * 121.62484 * 0.26173 * 20 7 6 22 22 H 0.96707 * 113.99938 * 300.00557 * 1 2 3 23 23 H 1.09001 * 109.47193 * 120.00348 * 2 1 3 24 24 H 1.48506 * 110.00115 * 178.68004 * 3 2 1 25 25 H 1.48498 * 110.00199 * 300.00028 * 3 2 1 26 26 H 1.08001 * 120.74680 * 0.02562 * 5 4 2 27 27 H 1.08005 * 120.44901 * 180.26675 * 6 5 4 28 28 H 0.97003 * 119.99562 * 179.72754 * 8 7 6 29 29 H 1.09009 * 113.61331 * 25.44366 * 11 9 8 30 30 H 1.08994 * 113.61832 * 254.53713 * 11 9 8 31 31 H 1.08000 * 126.77781 * 180.02562 * 17 16 15 32 32 H 1.08002 * 128.01009 * 180.02562 * 18 17 16 33 33 H 1.09000 * 113.61352 * 139.97832 * 19 12 11 34 34 H 1.09000 * 113.61667 * 270.79601 * 19 12 11 35 35 H 1.07997 * 119.57321 * 180.02562 * 21 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2305 5 6 1.6004 -2.0397 -1.4569 6 6 2.0781 -2.6533 -2.6011 7 6 2.8774 -1.9249 -3.4758 8 7 3.3677 -2.5302 -4.6272 9 6 3.0471 -3.9311 -4.9115 10 1 2.7952 -4.4980 -4.0153 11 6 2.0401 -4.1137 -6.0594 12 6 2.8929 -5.3106 -6.5122 13 1 2.5998 -6.2554 -6.0545 14 6 3.0497 -5.4087 -8.0079 15 7 3.5154 -6.4227 -8.6782 16 8 3.5193 -6.2059 -9.8679 17 6 3.0424 -4.9849 -10.1478 18 6 2.7182 -4.4185 -8.9610 19 6 4.0802 -4.6289 -5.8119 20 7 3.1708 -0.6582 -3.2245 21 6 2.7255 -0.0462 -2.1438 22 1 -0.3933 0.4418 0.7651 23 1 1.7923 -0.5139 0.8900 24 1 3.5347 1.7701 0.0321 25 1 1.5616 2.4679 -1.2085 26 1 0.9806 -2.5813 -0.7576 27 1 1.8365 -3.6849 -2.8105 28 1 3.9222 -2.0250 -5.2422 29 1 2.0343 -3.2877 -6.7707 30 1 1.0410 -4.3916 -5.7237 31 1 2.9367 -4.5408 -11.1266 32 1 2.3030 -3.4374 -8.7836 33 1 4.7281 -5.3228 -5.2762 34 1 4.6330 -3.9450 -6.4558 35 1 2.9849 0.9879 -1.9718 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_18339244_13915762.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:28:19 Heat of formation + Delta-G solvation = 110.937660 kcal Electronic energy + Delta-G solvation = -20025.006984 eV Core-core repulsion = 16801.396306 eV Total energy + Delta-G solvation = -3223.610678 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 274.110 amu Computer time = 0.37 seconds Orbital eigenvalues (eV) -45.91004 -41.54054 -40.37212 -37.85252 -35.97456 -34.34356 -33.37545 -32.63682 -31.33665 -27.37191 -27.01495 -25.78330 -24.90748 -24.02240 -22.78775 -21.84274 -20.85010 -19.09425 -18.66086 -18.45877 -18.40877 -17.95457 -16.90926 -16.60970 -16.24414 -15.83481 -15.60356 -15.25895 -15.06190 -14.52487 -14.23237 -14.16703 -13.85675 -13.73434 -13.61125 -13.58463 -12.84503 -12.54860 -12.33961 -12.05711 -11.95452 -11.82628 -11.14331 -10.96500 -10.73996 -10.61164 -10.58039 -10.19659 -8.72183 -4.98720 0.21058 0.42070 0.52928 1.20246 1.29397 1.64337 1.96921 2.00489 2.30304 2.78553 3.03187 3.17313 3.39931 3.43175 3.48267 3.54528 3.70376 3.81191 3.85161 3.96394 4.09447 4.15322 4.27051 4.33837 4.38391 4.44898 4.50021 4.55926 4.58960 4.70716 4.77327 4.79481 4.96525 4.99741 5.10091 5.30003 5.49007 5.96506 6.48613 6.63210 7.12463 7.29055 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.548 6.548 2 C -0.056 4.056 3 Si 0.677 3.323 4 C -0.189 4.189 5 C -0.002 4.002 6 C -0.237 4.237 7 C 0.407 3.593 8 N -0.711 5.711 9 C 0.133 3.867 10 H 0.115 0.885 11 C -0.143 4.143 12 C -0.034 4.034 13 H 0.113 0.887 14 C 0.028 3.972 15 N -0.362 5.362 16 O 0.100 5.900 17 C -0.054 4.054 18 C -0.233 4.233 19 C -0.131 4.131 20 N -0.539 5.539 21 C 0.150 3.850 22 H 0.382 0.618 23 H 0.073 0.927 24 H -0.253 1.253 25 H -0.249 1.249 26 H 0.138 0.862 27 H 0.136 0.864 28 H 0.407 0.593 29 H 0.093 0.907 30 H 0.081 0.919 31 H 0.218 0.782 32 H 0.171 0.829 33 H 0.084 0.916 34 H 0.091 0.909 35 H 0.146 0.854 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.819 1.406 2.239 3.209 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.354 6.354 2 C -0.167 4.167 3 Si 0.579 3.421 4 C -0.194 4.194 5 C -0.028 4.028 6 C -0.262 4.262 7 C 0.171 3.829 8 N -0.342 5.342 9 C 0.027 3.973 10 H 0.133 0.867 11 C -0.183 4.183 12 C -0.054 4.054 13 H 0.131 0.869 14 C -0.131 4.131 15 N -0.065 5.065 16 O 0.033 5.967 17 C -0.136 4.136 18 C -0.255 4.255 19 C -0.171 4.171 20 N -0.255 5.255 21 C -0.007 4.007 22 H 0.229 0.771 23 H 0.090 0.910 24 H -0.178 1.178 25 H -0.174 1.174 26 H 0.156 0.844 27 H 0.154 0.846 28 H 0.243 0.757 29 H 0.111 0.889 30 H 0.100 0.900 31 H 0.234 0.766 32 H 0.188 0.812 33 H 0.103 0.897 34 H 0.110 0.890 35 H 0.163 0.837 Dipole moment (debyes) X Y Z Total from point charges -0.295 0.727 0.978 1.254 hybrid contribution -0.614 0.107 -0.028 0.624 sum -0.909 0.835 0.950 1.557 Atomic orbital electron populations 1.86489 1.17463 1.81767 1.49692 1.24422 0.85465 1.09931 0.96923 0.95326 0.80835 0.78291 0.87665 1.20035 1.04691 0.95888 0.98831 1.21181 0.93466 0.93115 0.95016 1.21489 1.05387 1.01876 0.97407 1.18409 0.89282 0.88372 0.86821 1.44472 1.55985 1.11306 1.22425 1.22485 0.96104 0.81405 0.97336 0.86703 1.23652 0.99054 0.97334 0.98265 1.20681 0.98327 0.99734 0.86622 0.86876 1.23362 1.01047 0.90672 0.98014 1.73873 1.19456 1.23467 0.89736 1.84869 1.61438 1.31015 1.19360 1.26098 0.99622 0.86070 1.01799 1.22713 1.08465 1.02835 0.91471 1.23398 0.96508 0.99415 0.97732 1.67120 1.27467 1.09277 1.21672 1.22005 0.92508 0.98104 0.88090 0.77079 0.90958 1.17808 1.17368 0.84396 0.84610 0.75700 0.88850 0.89986 0.76567 0.81183 0.89728 0.89045 0.83746 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.04 12.75 -35.23 -0.45 -0.49 16 2 C -0.06 0.00 2.83 36.01 0.10 0.10 16 3 Si 0.68 -0.64 29.82 -169.99 -5.07 -5.71 16 4 C -0.19 -0.50 5.43 -104.46 -0.57 -1.07 16 5 C 0.00 0.00 9.77 -39.32 -0.38 -0.39 16 6 C -0.24 -0.36 9.28 -39.23 -0.36 -0.72 16 7 C 0.41 1.11 7.65 -155.01 -1.19 -0.07 16 8 N -0.71 -0.17 5.53 -53.15 -0.29 -0.47 16 9 C 0.13 -0.23 4.02 -67.12 -0.27 -0.50 16 10 H 0.12 -0.30 6.11 -51.93 -0.32 -0.62 16 11 C -0.14 0.28 7.27 -25.92 -0.19 0.09 16 12 C -0.03 0.03 4.29 -90.96 -0.39 -0.36 16 13 H 0.11 -0.15 8.14 -51.93 -0.42 -0.57 16 14 C 0.03 0.03 6.70 -82.10 -0.55 -0.52 16 15 N -0.36 -1.23 12.07 33.42 0.40 -0.82 16 16 O 0.10 0.20 11.20 17.19 0.19 0.39 16 17 C -0.05 0.06 12.30 29.74 0.37 0.43 16 18 C -0.23 0.15 10.28 -39.38 -0.40 -0.26 16 19 C -0.13 0.21 7.38 -25.92 -0.19 0.02 16 20 N -0.54 -2.50 10.39 -12.44 -0.13 -2.63 16 21 C 0.15 0.59 9.84 -17.57 -0.17 0.42 16 22 H 0.38 -1.89 8.74 45.56 0.40 -1.50 16 23 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 24 H -0.25 -0.38 7.11 56.52 0.40 0.02 16 25 H -0.25 -0.59 7.11 56.52 0.40 -0.19 16 26 H 0.14 0.01 8.06 -52.49 -0.42 -0.41 16 27 H 0.14 -0.12 6.04 -52.48 -0.32 -0.44 16 28 H 0.41 -0.04 8.85 -40.82 -0.36 -0.40 16 29 H 0.09 -0.17 6.62 -51.92 -0.34 -0.51 16 30 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 31 H 0.22 -1.15 8.06 -52.49 -0.42 -1.57 16 32 H 0.17 -0.46 7.12 -52.49 -0.37 -0.83 16 33 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 34 H 0.09 -0.12 8.07 -51.93 -0.42 -0.54 16 35 H 0.15 0.45 4.88 -52.49 -0.26 0.19 16 LS Contribution 297.95 15.07 4.49 4.49 Total: 0.00 -8.35 297.95 -8.77 -17.12 By element: Atomic # 1 Polarization: -5.35 SS G_CDS: -3.71 Total: -9.07 kcal Atomic # 6 Polarization: 1.38 SS G_CDS: -4.20 Total: -2.82 kcal Atomic # 7 Polarization: -3.90 SS G_CDS: -0.02 Total: -3.92 kcal Atomic # 8 Polarization: 0.16 SS G_CDS: -0.26 Total: -0.09 kcal Atomic # 14 Polarization: -0.64 SS G_CDS: -5.07 Total: -5.71 kcal Total LS contribution 4.49 Total: 4.49 kcal Total: -8.35 -8.77 -17.12 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_18339244_13915762.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 128.060 kcal (2) G-P(sol) polarization free energy of solvation -8.351 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 119.709 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.772 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.123 kcal (6) G-S(sol) free energy of system = (1) + (5) 110.938 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.37 seconds