Wall clock time and date at job start Mon Mar 8 2021 07:28:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86298 * 109.46894 * 2 1 4 4 C 1.50697 * 109.47572 * 120.00230 * 2 1 3 5 5 C 1.37980 * 120.32902 * 244.97970 * 4 2 1 6 6 N 1.32007 * 120.90301 * 180.02562 * 5 4 2 7 7 C 1.32337 * 121.64439 * 0.02562 * 6 5 4 8 8 N 1.39148 * 119.71634 * 180.27452 * 7 6 5 9 9 C 1.46497 * 120.00060 * 359.72463 * 8 7 6 10 10 H 1.09000 * 112.85177 * 334.66879 * 9 8 7 11 11 C 1.53785 * 113.61599 * 105.86049 * 9 8 7 12 12 C 1.53950 * 87.01908 * 139.95332 * 11 9 8 13 13 H 1.09003 * 113.53881 * 89.18957 * 12 11 9 14 14 C 1.50705 * 113.66741 * 220.07195 * 12 11 9 15 15 N 1.30174 * 126.80301 * 192.24911 * 14 12 11 16 16 O 1.20921 * 111.60680 * 179.79175 * 15 14 12 17 17 C 1.34043 * 111.56324 * 0.48569 * 16 15 14 18 18 C 1.35452 * 106.44838 * 359.70846 * 17 16 15 19 19 C 1.53777 * 113.61892 * 203.47051 * 9 8 7 20 20 C 1.39345 * 120.56527 * 359.97438 * 7 6 5 21 21 F 1.35105 * 120.47109 * 180.02562 * 20 7 6 22 22 C 1.38438 * 119.05622 * 0.02562 * 20 7 6 23 23 H 0.96698 * 114.00180 * 299.99173 * 1 2 3 24 24 H 1.09001 * 109.47097 * 240.00764 * 2 1 3 25 25 H 1.48503 * 110.00217 * 178.68226 * 3 2 1 26 26 H 1.48501 * 110.00378 * 300.00627 * 3 2 1 27 27 H 1.08003 * 119.54993 * 0.04594 * 5 4 2 28 28 H 0.97000 * 119.99732 * 179.72537 * 8 7 6 29 29 H 1.08998 * 113.61919 * 254.53481 * 11 9 8 30 30 H 1.09005 * 113.61094 * 25.43145 * 11 9 8 31 31 H 1.07992 * 126.77625 * 179.72543 * 17 16 15 32 32 H 1.07998 * 128.00808 * 179.97438 * 18 17 16 33 33 H 1.09007 * 113.61234 * 334.56601 * 19 9 8 34 34 H 1.09000 * 113.61621 * 105.46869 * 19 9 8 35 35 H 1.08003 * 120.75719 * 179.97438 * 22 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.6386 -0.0203 2.1934 6 7 3.0844 -0.6314 3.2753 7 6 2.8741 -1.9218 3.4803 8 7 3.3573 -2.5240 4.6379 9 6 4.1004 -1.7314 5.6205 10 1 4.5845 -0.8589 5.1818 11 6 3.2958 -1.4149 6.8923 12 6 4.5925 -1.6742 7.6805 13 1 5.2108 -0.7853 7.8060 14 6 4.3773 -2.4258 8.9689 15 7 5.2395 -2.5878 9.9306 16 8 4.7755 -3.2353 10.8403 17 6 3.5123 -3.6055 10.5873 18 6 3.2009 -3.0996 9.3699 19 6 5.0324 -2.5703 6.5108 20 6 2.1675 -2.6811 2.5498 21 9 1.9535 -3.9983 2.7612 22 6 1.6881 -2.0668 1.4056 23 1 -0.3933 0.4416 0.7651 24 1 1.7923 -0.5137 -0.8901 25 1 3.5345 1.7704 0.0321 26 1 1.5613 2.4680 -1.2084 27 1 2.8297 1.0343 2.0605 28 1 3.2020 -3.4687 4.7942 29 1 2.9507 -0.3823 6.9450 30 1 2.5063 -2.1372 7.1005 31 1 2.8695 -4.1912 11.2277 32 1 2.2697 -3.1905 8.8304 33 1 4.7187 -3.6090 6.6146 34 1 6.0874 -2.4691 6.2560 35 1 1.1374 -2.6292 0.6661 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_18339244_17656566.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:28:28 Heat of formation + Delta-G solvation = 62.991775 kcal Electronic energy + Delta-G solvation = -22403.847596 eV Core-core repulsion = 18708.703854 eV Total energy + Delta-G solvation = -3695.143743 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 292.101 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -49.89344 -45.88639 -41.52615 -40.35807 -38.01517 -35.98680 -34.33859 -33.21205 -32.61814 -31.26913 -27.40602 -26.94085 -26.15595 -24.90449 -23.92781 -23.03310 -22.03167 -20.90108 -19.28367 -19.01238 -18.48396 -18.40916 -18.25286 -17.57213 -16.98158 -16.80334 -16.38111 -16.10770 -15.88057 -15.64395 -15.39225 -14.92270 -14.42047 -14.34079 -14.08138 -13.94280 -13.74989 -13.56614 -13.52958 -12.79114 -12.60439 -12.53418 -12.12517 -11.99392 -11.75831 -11.28148 -10.93642 -10.70768 -10.69558 -10.58432 -10.48434 -8.80579 -5.11142 -0.09743 0.08981 0.54948 1.20289 1.22877 1.56686 1.90698 1.91962 2.32192 2.51593 2.99282 3.06849 3.19211 3.30903 3.39449 3.47353 3.56088 3.60911 3.80117 3.81312 3.91585 3.96977 4.17954 4.35189 4.37224 4.43804 4.52346 4.54860 4.60596 4.64501 4.67670 4.86346 4.86783 4.95099 4.99688 5.13101 5.40445 5.90659 6.13445 6.50208 6.91107 7.31665 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.055 4.055 3 Si 0.684 3.316 4 C -0.210 4.210 5 C 0.149 3.851 6 N -0.511 5.511 7 C 0.391 3.609 8 N -0.706 5.706 9 C 0.139 3.861 10 H 0.124 0.876 11 C -0.141 4.141 12 C -0.034 4.034 13 H 0.113 0.887 14 C 0.029 3.971 15 N -0.363 5.363 16 O 0.099 5.901 17 C -0.055 4.055 18 C -0.233 4.233 19 C -0.135 4.135 20 C -0.020 4.020 21 F -0.134 7.134 22 C -0.037 4.037 23 H 0.380 0.620 24 H 0.115 0.885 25 H -0.254 1.254 26 H -0.251 1.251 27 H 0.163 0.837 28 H 0.413 0.587 29 H 0.082 0.918 30 H 0.089 0.911 31 H 0.217 0.783 32 H 0.170 0.830 33 H 0.088 0.912 34 H 0.083 0.917 35 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.734 0.900 1.541 3.265 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.166 4.166 3 Si 0.585 3.415 4 C -0.215 4.215 5 C -0.008 4.008 6 N -0.228 5.228 7 C 0.153 3.847 8 N -0.338 5.338 9 C 0.034 3.966 10 H 0.142 0.858 11 C -0.180 4.180 12 C -0.053 4.053 13 H 0.131 0.869 14 C -0.130 4.130 15 N -0.066 5.066 16 O 0.033 5.967 17 C -0.137 4.137 18 C -0.255 4.255 19 C -0.174 4.174 20 C -0.047 4.047 21 F -0.113 7.113 22 C -0.064 4.064 23 H 0.227 0.773 24 H 0.133 0.867 25 H -0.178 1.178 26 H -0.176 1.176 27 H 0.180 0.820 28 H 0.250 0.750 29 H 0.101 0.899 30 H 0.107 0.893 31 H 0.234 0.766 32 H 0.188 0.812 33 H 0.107 0.893 34 H 0.102 0.898 35 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges -0.318 2.111 1.521 2.621 hybrid contribution -1.415 -2.035 -0.885 2.631 sum -1.733 0.076 0.637 1.848 Atomic orbital electron populations 1.86516 1.17062 1.81680 1.49289 1.24859 0.85237 1.09922 0.96627 0.94897 0.81184 0.77565 0.87819 1.20933 1.05749 0.94635 1.00171 1.22317 0.91668 0.99223 0.87582 1.67269 1.24922 1.07256 1.23344 1.18450 0.90412 0.88993 0.86879 1.44575 1.58898 1.12002 1.18285 1.22442 0.92313 0.95468 0.86389 0.85847 1.23620 0.96332 1.03388 0.94664 1.20705 0.99573 0.98085 0.86972 0.86892 1.23392 0.90856 1.01394 0.97367 1.73872 1.22693 1.11748 0.98262 1.84872 1.24876 1.51095 1.35872 1.26095 0.87066 1.01955 0.98562 1.22706 1.01194 1.03996 0.97583 1.23425 1.00844 0.99308 0.93863 1.18009 1.08642 0.79544 0.98479 1.91495 1.93659 1.31200 1.94908 1.21291 0.95519 0.94449 0.95104 0.77296 0.86742 1.17829 1.17594 0.82000 0.74981 0.89912 0.89253 0.76609 0.81205 0.89312 0.89822 0.83340 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.43 12.84 -35.23 -0.45 -0.02 16 2 C -0.05 0.07 2.82 36.00 0.10 0.18 16 3 Si 0.68 -1.51 29.83 -169.99 -5.07 -6.58 16 4 C -0.21 0.14 5.36 -104.47 -0.56 -0.42 16 5 C 0.15 -0.10 9.83 -17.57 -0.17 -0.27 16 6 N -0.51 -0.45 9.15 -12.36 -0.11 -0.56 16 7 C 0.39 0.36 7.49 -154.85 -1.16 -0.80 16 8 N -0.71 0.48 5.51 -53.06 -0.29 0.19 16 9 C 0.14 -0.20 4.24 -67.12 -0.28 -0.48 16 10 H 0.12 -0.10 7.45 -51.93 -0.39 -0.48 16 11 C -0.14 0.26 7.29 -25.83 -0.19 0.07 16 12 C -0.03 0.03 4.29 -90.87 -0.39 -0.36 16 13 H 0.11 -0.10 8.14 -51.93 -0.42 -0.52 16 14 C 0.03 0.03 6.70 -82.10 -0.55 -0.52 16 15 N -0.36 -1.21 12.07 33.42 0.40 -0.81 16 16 O 0.10 0.19 11.20 17.17 0.19 0.38 16 17 C -0.06 0.08 12.30 29.74 0.37 0.44 16 18 C -0.23 0.20 10.28 -39.38 -0.40 -0.20 16 19 C -0.14 0.21 7.38 -25.92 -0.19 0.01 16 20 C -0.02 -0.02 7.35 -39.10 -0.29 -0.31 16 21 F -0.13 -0.24 16.65 2.25 0.04 -0.20 16 22 C -0.04 -0.01 9.82 -39.26 -0.39 -0.40 16 23 H 0.38 -1.75 8.70 45.56 0.40 -1.36 16 24 H 0.12 -0.12 7.96 -51.93 -0.41 -0.53 16 25 H -0.25 -0.03 7.11 56.52 0.40 0.37 16 26 H -0.25 -0.31 7.11 56.52 0.40 0.10 16 27 H 0.16 -0.50 4.91 -52.48 -0.26 -0.76 16 28 H 0.41 -0.66 8.18 -40.82 -0.33 -1.00 16 29 H 0.08 -0.14 8.14 -51.93 -0.42 -0.57 16 30 H 0.09 -0.19 6.63 -51.93 -0.34 -0.54 16 31 H 0.22 -1.19 8.06 -52.49 -0.42 -1.61 16 32 H 0.17 -0.52 7.12 -52.49 -0.37 -0.89 16 33 H 0.09 -0.14 8.06 -51.92 -0.42 -0.56 16 34 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 35 H 0.15 -0.07 8.06 -52.48 -0.42 -0.49 16 LS Contribution 306.17 15.07 4.61 4.61 Total: 0.00 -7.20 306.17 -8.23 -15.43 By element: Atomic # 1 Polarization: -5.94 SS G_CDS: -3.44 Total: -9.38 kcal Atomic # 6 Polarization: 1.05 SS G_CDS: -4.11 Total: -3.06 kcal Atomic # 7 Polarization: -1.18 SS G_CDS: 0.00 Total: -1.18 kcal Atomic # 8 Polarization: 0.62 SS G_CDS: -0.26 Total: 0.36 kcal Atomic # 9 Polarization: -0.24 SS G_CDS: 0.04 Total: -0.20 kcal Atomic # 14 Polarization: -1.51 SS G_CDS: -5.07 Total: -6.58 kcal Total LS contribution 4.61 Total: 4.61 kcal Total: -7.20 -8.23 -15.43 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_18339244_17656566.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 78.422 kcal (2) G-P(sol) polarization free energy of solvation -7.198 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 71.224 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.233 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.430 kcal (6) G-S(sol) free energy of system = (1) + (5) 62.992 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.42 seconds