Wall clock time and date at job start Mon Mar 8 2021 07:48:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86294 * 109.47272 * 2 1 4 4 C 1.50700 * 109.46737 * 240.00232 * 2 1 3 5 5 C 1.38607 * 120.72053 * 119.98062 * 4 2 1 6 6 N 1.32278 * 119.19728 * 180.02562 * 5 4 2 7 7 C 1.32490 * 120.74198 * 359.97438 * 6 5 4 8 8 N 1.38399 * 119.21980 * 179.97438 * 7 6 5 9 9 C 1.46500 * 120.00262 * 175.06793 * 8 7 6 10 10 C 1.53005 * 112.84940 * 69.42038 * 9 8 7 11 11 O 1.42899 * 109.47084 * 54.96900 * 10 9 8 12 12 C 1.53783 * 113.61524 * 200.72248 * 9 8 7 13 13 C 1.53784 * 87.08122 * 89.12167 * 12 9 8 14 14 H 1.08999 * 113.69541 * 139.99008 * 13 12 9 15 15 O 1.42903 * 113.61007 * 270.88599 * 13 12 9 16 16 C 1.53779 * 87.08059 * 25.43172 * 13 12 9 17 17 N 1.32493 * 121.56512 * 359.97438 * 7 6 5 18 18 C 1.32282 * 120.74246 * 0.02562 * 17 7 6 19 19 H 0.96697 * 114.00331 * 60.00206 * 1 2 3 20 20 H 1.08993 * 109.47410 * 120.00475 * 2 1 3 21 21 H 1.48499 * 110.00011 * 298.68571 * 3 2 1 22 22 H 1.48503 * 110.00082 * 60.00142 * 3 2 1 23 23 H 1.07996 * 120.39968 * 0.02562 * 5 4 2 24 24 H 0.97004 * 120.00157 * 355.07021 * 8 7 6 25 25 H 1.08994 * 109.47159 * 174.96963 * 10 9 8 26 26 H 1.09007 * 109.46622 * 294.96992 * 10 9 8 27 27 H 0.96695 * 113.99832 * 180.02562 * 11 10 9 28 28 H 1.09009 * 113.61233 * 203.66715 * 12 9 8 29 29 H 1.08998 * 113.61870 * 334.56964 * 12 9 8 30 30 H 0.96701 * 113.99796 * 277.49513 * 15 13 12 31 31 H 1.09006 * 113.61649 * 220.02247 * 16 13 12 32 32 H 1.09003 * 113.69541 * 89.12948 * 16 13 12 33 33 H 1.07996 * 120.40113 * 180.02562 * 18 17 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7104 -1.2305 5 6 2.7286 -0.0511 -2.1529 6 7 3.1523 -0.7035 -3.2227 7 6 2.8230 -1.9721 -3.4168 8 7 3.2834 -2.6242 -4.5474 9 6 3.0211 -4.0544 -4.7260 10 6 1.5451 -4.3594 -4.9893 11 8 1.0935 -3.5961 -6.1098 12 6 3.9793 -4.7375 -5.7160 13 6 4.9041 -5.0027 -4.5163 14 1 5.3739 -5.9861 -4.5344 15 8 5.8349 -3.9475 -4.2669 16 6 3.6470 -4.9368 -3.6331 17 7 2.0635 -2.6313 -2.5542 18 6 1.6067 -2.0375 -1.4640 19 1 -0.3934 0.4416 -0.7650 20 1 1.7923 -0.5139 0.8899 21 1 1.5878 2.4585 -1.2242 22 1 1.5615 2.4678 1.2085 23 1 3.0006 0.9828 -1.9999 24 1 3.7798 -2.1343 -5.2216 25 1 1.4259 -5.4218 -5.2017 26 1 0.9572 -4.0964 -4.1098 27 1 0.1639 -3.7394 -6.3343 28 1 3.5721 -5.6449 -6.1624 29 1 4.4045 -4.0562 -6.4529 30 1 6.6277 -3.9836 -4.8194 31 1 3.8039 -4.4162 -2.6883 32 1 3.1480 -5.8979 -3.5089 33 1 0.9883 -2.5802 -0.7644 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_18341544_12175864.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:48:20 Heat of formation + Delta-G solvation = -26.254855 kcal Electronic energy + Delta-G solvation = -19479.257699 eV Core-core repulsion = 16315.694137 eV Total energy + Delta-G solvation = -3163.563562 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 254.110 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -42.13045 -40.92545 -38.11339 -37.56697 -36.21857 -34.66657 -34.52613 -31.84219 -28.60936 -27.18437 -26.41585 -25.58462 -23.60814 -22.79770 -20.68158 -19.21727 -18.63575 -18.27405 -18.13240 -17.81260 -16.64088 -16.55807 -16.37105 -16.12310 -15.63364 -15.55779 -15.10820 -14.96609 -14.44657 -13.95112 -13.72582 -13.47135 -13.25771 -13.06360 -12.74605 -12.24666 -12.15125 -11.73596 -11.69107 -11.57767 -11.21770 -10.90689 -10.72633 -10.63399 -9.88162 -8.92615 -4.97481 0.20783 0.29470 1.28081 1.57926 1.87419 1.95925 2.94245 2.96755 3.04592 3.26331 3.39515 3.45721 3.59355 3.61115 3.74589 3.81750 3.89862 4.11005 4.31306 4.38146 4.46439 4.54250 4.59863 4.66786 4.76729 4.82727 4.89240 5.01127 5.05719 5.34482 5.92533 6.19487 6.38680 6.56457 6.63282 6.66771 7.45329 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.531 6.531 2 C -0.051 4.051 3 Si 0.677 3.323 4 C -0.299 4.299 5 C 0.201 3.799 6 N -0.565 5.565 7 C 0.580 3.420 8 N -0.653 5.653 9 C 0.179 3.821 10 C 0.073 3.927 11 O -0.569 6.569 12 C -0.165 4.165 13 C 0.078 3.922 14 H 0.074 0.926 15 O -0.544 6.544 16 C -0.126 4.126 17 N -0.566 5.566 18 C 0.220 3.780 19 H 0.375 0.625 20 H 0.119 0.881 21 H -0.258 1.258 22 H -0.254 1.254 23 H 0.165 0.835 24 H 0.417 0.583 25 H 0.054 0.946 26 H 0.065 0.935 27 H 0.378 0.622 28 H 0.105 0.895 29 H 0.081 0.919 30 H 0.381 0.619 31 H 0.087 0.913 32 H 0.105 0.895 33 H 0.168 0.832 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.515 -2.917 -0.889 3.405 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.162 4.162 3 Si 0.578 3.422 4 C -0.307 4.307 5 C 0.033 3.967 6 N -0.287 5.287 7 C 0.223 3.777 8 N -0.288 5.288 9 C 0.091 3.909 10 C -0.006 4.006 11 O -0.374 6.374 12 C -0.203 4.203 13 C 0.018 3.982 14 H 0.091 0.909 15 O -0.350 6.350 16 C -0.165 4.165 17 N -0.288 5.288 18 C 0.051 3.949 19 H 0.223 0.777 20 H 0.137 0.863 21 H -0.183 1.183 22 H -0.178 1.178 23 H 0.181 0.819 24 H 0.256 0.744 25 H 0.072 0.928 26 H 0.083 0.917 27 H 0.225 0.775 28 H 0.123 0.877 29 H 0.100 0.900 30 H 0.228 0.772 31 H 0.106 0.894 32 H 0.124 0.876 33 H 0.185 0.815 Dipole moment (debyes) X Y Z Total from point charges 1.889 -2.697 -0.784 3.384 hybrid contribution -1.395 0.100 -0.485 1.481 sum 0.493 -2.597 -1.270 2.933 Atomic orbital electron populations 1.86595 1.17887 1.79874 1.49344 1.24632 0.83647 1.10427 0.97519 0.95210 0.91625 0.74708 0.80690 1.21587 1.08688 0.98416 1.02019 1.22729 0.88544 0.98729 0.86686 1.67886 1.28152 1.08765 1.23883 1.19285 0.86274 0.85198 0.86897 1.43488 1.58361 1.07601 1.19314 1.21057 0.92565 0.80329 0.96967 1.22551 0.94584 0.94129 0.89351 1.86471 1.31623 1.69089 1.50220 1.23958 0.97370 1.01582 0.97391 1.22724 0.89730 0.90416 0.95308 0.90858 1.86539 1.33475 1.50194 1.64752 1.23348 0.93907 1.00391 0.98830 1.68052 1.15965 1.39133 1.05678 1.22819 0.90420 0.90584 0.91062 0.77708 0.86325 1.18296 1.17823 0.81877 0.74438 0.92831 0.91711 0.77513 0.87669 0.90000 0.77167 0.89396 0.87642 0.81521 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.39 12.79 -35.23 -0.45 -0.84 16 2 C -0.05 0.03 2.85 36.01 0.10 0.13 16 3 Si 0.68 -0.73 29.87 -169.99 -5.08 -5.80 16 4 C -0.30 -0.22 5.40 -104.35 -0.56 -0.78 16 5 C 0.20 0.33 9.92 -17.22 -0.17 0.16 16 6 N -0.57 -2.26 10.46 -13.93 -0.15 -2.40 16 7 C 0.58 2.23 7.93 -322.82 -2.56 -0.32 16 8 N -0.65 -1.64 4.65 -48.81 -0.23 -1.86 16 9 C 0.18 0.12 0.73 -131.00 -0.10 0.03 16 10 C 0.07 0.03 6.32 37.16 0.23 0.27 16 11 O -0.57 -0.80 13.53 -35.23 -0.48 -1.28 16 12 C -0.16 0.19 7.21 -25.92 -0.19 0.00 16 13 C 0.08 -0.07 5.28 -25.92 -0.14 -0.20 16 14 H 0.07 -0.17 8.14 -51.93 -0.42 -0.60 16 15 O -0.54 -0.24 13.09 -35.23 -0.46 -0.70 16 16 C -0.13 -0.02 6.74 -25.92 -0.17 -0.20 16 17 N -0.57 -1.69 7.26 -13.93 -0.10 -1.79 16 18 C 0.22 0.32 10.92 -17.22 -0.19 0.14 16 19 H 0.38 -0.64 8.70 45.56 0.40 -0.24 16 20 H 0.12 -0.18 7.96 -51.93 -0.41 -0.59 16 21 H -0.26 -0.26 7.11 56.52 0.40 0.15 16 22 H -0.25 -0.54 7.11 56.52 0.40 -0.14 16 23 H 0.16 -0.13 5.04 -52.49 -0.26 -0.40 16 24 H 0.42 1.02 8.80 -40.82 -0.36 0.66 16 25 H 0.05 -0.08 8.08 -51.93 -0.42 -0.50 16 26 H 0.06 0.10 6.90 -51.93 -0.36 -0.26 16 27 H 0.38 -0.87 9.12 45.56 0.42 -0.46 16 28 H 0.10 -0.26 8.06 -51.92 -0.42 -0.67 16 29 H 0.08 -0.07 8.10 -51.93 -0.42 -0.49 16 30 H 0.38 -1.34 9.12 45.56 0.42 -0.92 16 31 H 0.09 0.24 7.14 -51.93 -0.37 -0.13 16 32 H 0.11 -0.19 8.10 -51.93 -0.42 -0.61 16 33 H 0.17 -0.07 8.06 -52.49 -0.42 -0.49 16 LS Contribution 280.49 15.07 4.23 4.23 Total: 0.00 -8.22 280.49 -8.71 -16.93 By element: Atomic # 1 Polarization: -3.44 SS G_CDS: -2.26 Total: -5.70 kcal Atomic # 6 Polarization: 2.95 SS G_CDS: -3.74 Total: -0.78 kcal Atomic # 7 Polarization: -5.58 SS G_CDS: -0.47 Total: -6.05 kcal Atomic # 8 Polarization: -1.43 SS G_CDS: -1.39 Total: -2.82 kcal Atomic # 14 Polarization: -0.73 SS G_CDS: -5.08 Total: -5.80 kcal Total LS contribution 4.23 Total: 4.23 kcal Total: -8.22 -8.71 -16.93 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_18341544_12175864.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -9.323 kcal (2) G-P(sol) polarization free energy of solvation -8.220 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -17.542 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.713 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.932 kcal (6) G-S(sol) free energy of system = (1) + (5) -26.255 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds