Wall clock time and date at job start Mon Mar 8 2021 07:48:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86300 * 109.47157 * 2 1 4 4 C 1.50705 * 109.47010 * 240.00349 * 2 1 3 5 5 C 1.38838 * 120.33307 * 299.72271 * 4 2 1 6 6 C 1.38343 * 118.50117 * 179.75721 * 5 4 2 7 7 C 1.39090 * 119.10191 * 0.55868 * 6 5 4 8 8 N 1.39001 * 119.70757 * 179.69935 * 7 6 5 9 9 C 1.46492 * 120.00345 * 354.30109 * 8 7 6 10 10 C 1.53009 * 112.84788 * 294.76777 * 9 8 7 11 11 O 1.42901 * 109.46719 * 304.33528 * 10 9 8 12 12 C 1.53788 * 113.61646 * 65.95701 * 9 8 7 13 13 C 1.53787 * 87.07924 * 139.98649 * 12 9 8 14 14 H 1.08997 * 113.61281 * 89.20396 * 13 12 9 15 15 O 1.42905 * 113.60957 * 220.02365 * 13 12 9 16 16 C 1.53780 * 113.62036 * 163.56859 * 9 8 7 17 17 N 1.32431 * 120.58776 * 359.67910 * 7 6 5 18 18 C 1.31942 * 121.61943 * 0.02562 * 17 7 6 19 19 H 0.96708 * 113.99753 * 59.99163 * 1 2 3 20 20 H 1.08995 * 109.46841 * 120.00236 * 2 1 3 21 21 H 1.48502 * 109.99850 * 60.00251 * 3 2 1 22 22 H 1.48495 * 109.99914 * 181.31792 * 3 2 1 23 23 H 1.08000 * 120.74896 * 0.02574 * 5 4 2 24 24 H 1.08005 * 120.45043 * 180.25764 * 6 5 4 25 25 H 0.97009 * 119.99863 * 174.29723 * 8 7 6 26 26 H 1.08995 * 109.47047 * 64.34158 * 10 9 8 27 27 H 1.09006 * 109.47032 * 184.34187 * 10 9 8 28 28 H 0.96700 * 113.99554 * 179.97438 * 11 10 9 29 29 H 1.08992 * 113.61565 * 254.53740 * 12 9 8 30 30 H 1.08996 * 113.60958 * 25.35545 * 12 9 8 31 31 H 0.96695 * 113.99453 * 180.02562 * 15 13 12 32 32 H 1.09003 * 113.61107 * 334.56563 * 16 9 8 33 33 H 1.09001 * 113.61514 * 105.46875 * 16 9 8 34 34 H 1.08006 * 119.56988 * 180.02562 * 18 17 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2306 5 6 1.6049 -2.0411 -1.4543 6 6 2.0822 -2.6545 -2.5988 7 6 2.8782 -1.9249 -3.4756 8 7 3.3697 -2.5306 -4.6261 9 6 3.1546 -3.9623 -4.8493 10 6 3.8738 -4.8385 -3.8217 11 8 5.2672 -4.5212 -3.8173 12 6 1.6776 -4.3389 -5.0537 13 6 2.1580 -5.3118 -6.1435 14 1 2.3970 -6.3062 -5.7665 15 8 1.3131 -5.3432 -7.2956 16 6 3.3888 -4.4010 -6.3045 17 7 3.1716 -0.6582 -3.2242 18 6 2.7255 -0.0461 -2.1438 19 1 -0.3933 0.4419 -0.7651 20 1 1.7923 -0.5139 0.8899 21 1 1.5615 2.4678 1.2085 22 1 3.5346 1.7702 -0.0321 23 1 0.9886 -2.5840 -0.7530 24 1 1.8441 -3.6874 -2.8062 25 1 3.8552 -2.0051 -5.2813 26 1 3.4561 -4.6549 -2.8318 27 1 3.7411 -5.8884 -4.0830 28 1 5.7865 -5.0396 -3.1874 29 1 1.2301 -4.8345 -4.1923 30 1 1.0672 -3.5205 -5.4354 31 1 1.6099 -5.9536 -7.9843 32 1 3.2473 -3.6001 -7.0301 33 1 4.3208 -4.9469 -6.4513 34 1 2.9849 0.9882 -1.9718 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_18341544_13915762.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:48:23 Heat of formation + Delta-G solvation = -46.559118 kcal Electronic energy + Delta-G solvation = -19087.710399 eV Core-core repulsion = 15988.692288 eV Total energy + Delta-G solvation = -3099.018110 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 253.115 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -41.90787 -40.70611 -37.98048 -37.63370 -36.47504 -34.66858 -33.25614 -31.21204 -28.42784 -27.27996 -26.34605 -24.48133 -23.94393 -22.39792 -20.23441 -19.16438 -18.57942 -18.31866 -18.29154 -17.54193 -16.68523 -16.36814 -16.35378 -16.01512 -15.69914 -15.23407 -14.86498 -14.80303 -14.19296 -14.00806 -13.83263 -13.66683 -13.42245 -13.26264 -13.13421 -12.34840 -12.02657 -11.95479 -11.79304 -11.32186 -11.09174 -10.97244 -10.66729 -10.35218 -10.31786 -8.65899 -5.00322 0.29673 0.47732 1.34392 1.66039 2.00281 2.01882 2.71071 2.89493 3.07139 3.19085 3.47205 3.51298 3.52571 3.63028 3.82016 3.83863 3.93477 4.06574 4.14029 4.17912 4.26282 4.37771 4.51629 4.56102 4.57664 4.73098 4.79053 4.81643 4.97473 5.04781 5.33581 5.56776 6.03605 6.48103 6.53237 6.58302 6.62059 7.22263 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.051 4.051 3 Si 0.682 3.318 4 C -0.238 4.238 5 C -0.006 4.006 6 C -0.245 4.245 7 C 0.415 3.585 8 N -0.697 5.697 9 C 0.162 3.838 10 C 0.076 3.924 11 O -0.561 6.561 12 C -0.131 4.131 13 C 0.080 3.920 14 H 0.088 0.912 15 O -0.554 6.554 16 C -0.160 4.160 17 N -0.539 5.539 18 C 0.157 3.843 19 H 0.378 0.622 20 H 0.111 0.889 21 H -0.253 1.253 22 H -0.256 1.256 23 H 0.135 0.865 24 H 0.134 0.866 25 H 0.409 0.591 26 H 0.058 0.942 27 H 0.060 0.940 28 H 0.383 0.617 29 H 0.083 0.917 30 H 0.105 0.895 31 H 0.382 0.618 32 H 0.100 0.900 33 H 0.085 0.915 34 H 0.154 0.846 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.121 -3.499 -1.789 3.932 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.348 6.348 2 C -0.163 4.163 3 Si 0.584 3.416 4 C -0.243 4.243 5 C -0.032 4.032 6 C -0.269 4.269 7 C 0.180 3.820 8 N -0.329 5.329 9 C 0.073 3.927 10 C -0.003 4.003 11 O -0.366 6.366 12 C -0.170 4.170 13 C 0.020 3.980 14 H 0.106 0.894 15 O -0.360 6.360 16 C -0.198 4.198 17 N -0.255 5.255 18 C -0.001 4.001 19 H 0.226 0.774 20 H 0.128 0.872 21 H -0.178 1.178 22 H -0.181 1.181 23 H 0.153 0.847 24 H 0.152 0.848 25 H 0.245 0.755 26 H 0.076 0.924 27 H 0.078 0.922 28 H 0.230 0.770 29 H 0.101 0.899 30 H 0.124 0.876 31 H 0.230 0.770 32 H 0.119 0.881 33 H 0.103 0.897 34 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges 0.423 -2.096 -1.544 2.637 hybrid contribution 0.361 -1.714 0.660 1.872 sum 0.784 -3.810 -0.883 3.989 Atomic orbital electron populations 1.86485 1.17372 1.81676 1.49286 1.24766 0.84986 1.09642 0.96944 0.94825 0.81117 0.78239 0.87445 1.20970 1.06215 0.96625 1.00498 1.21173 0.93881 0.93234 0.94933 1.21611 1.05526 1.02050 0.97751 1.18329 0.88599 0.88456 0.86640 1.44229 1.60740 1.07138 1.20775 1.21347 0.95270 0.80598 0.95451 1.22416 0.82662 0.96901 0.98328 1.86498 1.18370 1.66538 1.65226 1.23621 0.95394 0.99990 0.97985 1.23200 0.90206 0.97202 0.87375 0.89439 1.86546 1.52530 1.67653 1.29262 1.23964 0.99984 1.01007 0.94862 1.67153 1.26760 1.09443 1.22176 1.22219 0.91449 0.98511 0.87936 0.77428 0.87157 1.17824 1.18114 0.84744 0.84843 0.75473 0.92402 0.92199 0.77012 0.89896 0.87619 0.76964 0.88112 0.89673 0.82913 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.28 12.78 -35.23 -0.45 -0.73 16 2 C -0.05 -0.01 2.83 36.01 0.10 0.09 16 3 Si 0.68 -0.37 29.82 -169.99 -5.07 -5.44 16 4 C -0.24 -0.26 5.39 -104.46 -0.56 -0.82 16 5 C -0.01 -0.01 9.77 -39.32 -0.38 -0.39 16 6 C -0.24 -0.28 7.93 -39.23 -0.31 -0.59 16 7 C 0.42 1.05 7.42 -155.01 -1.15 -0.10 16 8 N -0.70 -0.79 5.30 -46.98 -0.25 -1.04 16 9 C 0.16 -0.14 0.76 -131.00 -0.10 -0.23 16 10 C 0.08 -0.12 6.04 37.16 0.22 0.11 16 11 O -0.56 0.02 13.54 -35.23 -0.48 -0.45 16 12 C -0.13 0.15 5.77 -25.91 -0.15 0.00 16 13 C 0.08 -0.15 4.86 -25.82 -0.13 -0.28 16 14 H 0.09 -0.32 7.61 -51.93 -0.40 -0.72 16 15 O -0.55 0.30 13.67 -35.23 -0.48 -0.18 16 16 C -0.16 0.24 7.23 -25.83 -0.19 0.06 16 17 N -0.54 -1.96 10.39 -12.44 -0.13 -2.09 16 18 C 0.16 0.29 9.84 -17.57 -0.17 0.12 16 19 H 0.38 -1.17 8.70 45.56 0.40 -0.77 16 20 H 0.11 0.06 7.96 -51.93 -0.41 -0.36 16 21 H -0.25 -0.64 7.11 56.52 0.40 -0.24 16 22 H -0.26 -0.48 7.11 56.52 0.40 -0.07 16 23 H 0.13 -0.03 8.06 -52.49 -0.42 -0.45 16 24 H 0.13 -0.08 4.05 -52.48 -0.21 -0.29 16 25 H 0.41 0.52 8.82 -40.82 -0.36 0.16 16 26 H 0.06 -0.09 5.96 -51.93 -0.31 -0.40 16 27 H 0.06 -0.21 7.32 -51.93 -0.38 -0.59 16 28 H 0.38 -1.47 9.12 45.56 0.42 -1.06 16 29 H 0.08 -0.19 7.05 -51.93 -0.37 -0.56 16 30 H 0.11 0.05 8.14 -51.93 -0.42 -0.37 16 31 H 0.38 -1.75 9.12 45.56 0.42 -1.34 16 32 H 0.10 -0.09 8.14 -51.93 -0.42 -0.51 16 33 H 0.08 -0.15 8.10 -51.93 -0.42 -0.57 16 34 H 0.15 -0.02 4.88 -52.48 -0.26 -0.28 16 LS Contribution 280.60 15.07 4.23 4.23 Total: 0.00 -8.36 280.60 -7.80 -16.15 By element: Atomic # 1 Polarization: -6.06 SS G_CDS: -2.35 Total: -8.41 kcal Atomic # 6 Polarization: 0.78 SS G_CDS: -2.82 Total: -2.03 kcal Atomic # 7 Polarization: -2.75 SS G_CDS: -0.38 Total: -3.13 kcal Atomic # 8 Polarization: 0.04 SS G_CDS: -1.41 Total: -1.37 kcal Atomic # 14 Polarization: -0.37 SS G_CDS: -5.07 Total: -5.44 kcal Total LS contribution 4.23 Total: 4.23 kcal Total: -8.36 -7.80 -16.15 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_18341544_13915762.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -30.407 kcal (2) G-P(sol) polarization free energy of solvation -8.356 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -38.763 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.796 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.152 kcal (6) G-S(sol) free energy of system = (1) + (5) -46.559 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds