Wall clock time and date at job start Mon Mar 8 2021 07:48:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 C 1.33321 * 125.95194 * 2 1 4 4 C 1.50705 * 122.70698 * 359.97438 * 3 2 1 5 5 O 1.42896 * 109.47268 * 330.00456 * 4 3 2 6 6 Si 1.86298 * 109.47114 * 210.00111 * 4 3 2 7 7 N 1.32117 * 114.58013 * 179.75346 * 3 2 1 8 8 C 1.29686 * 116.86651 * 0.47148 * 7 3 2 9 9 N 1.38604 * 124.94977 * 179.82087 * 8 7 3 10 10 C 1.46495 * 119.99913 * 185.41387 * 9 8 7 11 11 C 1.53002 * 112.85395 * 64.62625 * 10 9 8 12 12 O 1.42894 * 109.47108 * 44.76284 * 11 10 9 13 13 C 1.53788 * 113.69211 * 195.89823 * 10 9 8 14 14 C 1.53778 * 87.08257 * 89.12378 * 13 10 9 15 15 H 1.09001 * 113.68896 * 139.99301 * 14 13 10 16 16 O 1.42899 * 113.61255 * 270.88457 * 14 13 10 17 17 C 1.53779 * 87.08218 * 25.43410 * 14 13 10 18 18 S 1.70959 * 110.09859 * 359.54579 * 8 7 3 19 19 H 1.09002 * 109.46768 * 180.02562 * 1 2 3 20 20 H 1.09001 * 109.47221 * 300.02371 * 1 2 3 21 21 H 1.08997 * 109.47140 * 60.03181 * 1 2 3 22 22 H 1.09005 * 109.46994 * 90.00760 * 4 3 2 23 23 H 0.96699 * 114.00126 * 299.99986 * 5 4 3 24 24 H 1.48498 * 110.00320 * 180.02562 * 6 4 3 25 25 H 1.48505 * 110.00216 * 301.32442 * 6 4 3 26 26 H 0.97002 * 120.00359 * 5.40749 * 9 8 7 27 27 H 1.09000 * 109.47372 * 164.76259 * 11 10 9 28 28 H 1.08999 * 109.46660 * 284.75754 * 11 10 9 29 29 H 0.96693 * 114.00359 * 180.02562 * 12 11 10 30 30 H 1.08996 * 113.61313 * 203.67609 * 13 10 9 31 31 H 1.09002 * 113.60830 * 334.57204 * 13 10 9 32 32 H 0.96700 * 114.00415 * 277.49514 * 16 14 13 33 33 H 1.09002 * 113.61658 * 220.01915 * 17 14 13 34 34 H 1.09000 * 113.61423 * 89.11302 * 17 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2898 1.0792 0.0000 4 6 1.7413 2.4830 -0.0006 5 8 0.4815 2.5019 -0.6745 6 14 2.9325 3.6147 -0.8787 7 7 3.5850 0.8188 0.0052 8 6 3.9315 -0.4310 0.0000 9 7 5.2384 -0.8926 0.0006 10 6 5.5087 -2.3269 -0.1253 11 6 5.0675 -2.8985 -1.4742 12 8 5.4780 -2.0179 -2.5220 13 6 6.9401 -2.7233 0.2733 14 6 6.4094 -2.8950 1.7063 15 1 6.8217 -3.7604 2.2252 16 8 6.4704 -1.6992 2.4864 17 6 5.0287 -3.1523 1.0802 18 16 2.5414 -1.4260 0.0001 19 1 -0.3633 -1.0277 0.0005 20 1 -0.3634 0.5142 0.8898 21 1 -0.3633 0.5133 -0.8902 22 1 1.6089 2.8217 1.0270 23 1 0.5239 2.2118 -1.5960 24 1 2.4035 5.0023 -0.8856 25 1 4.2561 3.5796 -0.2062 26 1 5.9741 -0.2660 0.0842 27 1 5.5253 -3.8767 -1.6216 28 1 3.9823 -2.9995 -1.4885 29 1 5.2308 -2.3178 -3.4073 30 1 7.2780 -3.6543 -0.1817 31 1 7.6623 -1.9136 0.1691 32 1 7.3364 -1.5319 2.8829 33 1 4.2078 -2.6890 1.6276 34 1 4.8440 -4.2007 0.8458 There are 47 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 47 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_18341544_15704122.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:48:29 Heat of formation + Delta-G solvation = -39.267130 kcal Electronic energy + Delta-G solvation = -19945.039863 eV Core-core repulsion = 16779.952585 eV Total energy + Delta-G solvation = -3165.087278 eV No. of doubly occupied orbitals = 47 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 273.087 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -41.54769 -40.66521 -37.85274 -37.56819 -36.24561 -34.48381 -32.24754 -29.30286 -28.55202 -27.29947 -25.47763 -24.43315 -23.14503 -20.95387 -20.53350 -18.72593 -18.44593 -18.34096 -17.76989 -17.11185 -16.76058 -16.60590 -16.30277 -15.58620 -15.47855 -15.26481 -14.93860 -14.07455 -13.97007 -13.85307 -13.63562 -13.57626 -13.42793 -13.27814 -12.83975 -12.63741 -12.37767 -12.16961 -11.72934 -11.61262 -11.22141 -11.04710 -10.69225 -10.41816 -10.15597 -9.78792 -8.41360 -4.74562 0.21132 0.35794 0.95177 1.50655 1.90694 1.99890 2.09819 2.37987 2.77137 2.84640 3.25645 3.36284 3.45973 3.53707 3.69025 3.92746 4.17045 4.21672 4.29613 4.35365 4.36272 4.46734 4.55381 4.65708 4.67226 4.75829 4.77698 4.90916 5.04078 5.21529 5.42465 5.79817 6.45058 6.52613 6.53599 6.61057 7.16238 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 C -0.249 4.249 3 C 0.069 3.931 4 C -0.033 4.033 5 O -0.536 6.536 6 Si 0.716 3.284 7 N -0.548 5.548 8 C 0.340 3.660 9 N -0.650 5.650 10 C 0.160 3.840 11 C 0.067 3.933 12 O -0.559 6.559 13 C -0.161 4.161 14 C 0.084 3.916 15 H 0.077 0.923 16 O -0.544 6.544 17 C -0.148 4.148 18 S 0.087 5.913 19 H 0.055 0.945 20 H 0.072 0.928 21 H 0.081 0.919 22 H 0.119 0.881 23 H 0.378 0.622 24 H -0.263 1.263 25 H -0.252 1.252 26 H 0.415 0.585 27 H 0.063 0.937 28 H 0.054 0.946 29 H 0.381 0.619 30 H 0.109 0.891 31 H 0.085 0.915 32 H 0.383 0.617 33 H 0.090 0.910 34 H 0.112 0.888 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.050 -6.389 -2.544 7.175 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.116 4.116 2 C -0.371 4.371 3 C -0.061 4.061 4 C -0.146 4.146 5 O -0.341 6.341 6 Si 0.617 3.383 7 N -0.274 5.274 8 C -0.031 4.031 9 N -0.288 5.288 10 C 0.071 3.929 11 C -0.013 4.013 12 O -0.364 6.364 13 C -0.199 4.199 14 C 0.024 3.976 15 H 0.095 0.905 16 O -0.349 6.349 17 C -0.187 4.187 18 S 0.336 5.664 19 H 0.074 0.926 20 H 0.091 0.909 21 H 0.099 0.901 22 H 0.136 0.864 23 H 0.226 0.774 24 H -0.189 1.189 25 H -0.176 1.176 26 H 0.254 0.746 27 H 0.081 0.919 28 H 0.072 0.928 29 H 0.228 0.772 30 H 0.127 0.873 31 H 0.104 0.896 32 H 0.231 0.769 33 H 0.109 0.891 34 H 0.131 0.869 Dipole moment (debyes) X Y Z Total from point charges 2.270 -5.944 -1.580 6.556 hybrid contribution 0.301 0.212 0.329 0.494 sum 2.570 -5.732 -1.250 6.406 Atomic orbital electron populations 1.20112 0.86566 1.01398 1.03548 1.25110 1.01155 0.92971 1.17893 1.20076 0.86860 0.97036 1.02126 1.24508 0.92283 0.95712 1.02101 1.86512 1.29018 1.89566 1.28973 0.94064 0.77672 0.76228 0.90349 1.65943 1.17067 1.16631 1.27797 1.23070 0.91480 0.91160 0.97430 1.43153 1.01897 1.05596 1.78184 1.21367 0.97995 0.80691 0.92849 1.22584 0.98953 0.92674 0.87057 1.86530 1.82294 1.49960 1.17635 1.23946 0.95056 1.03405 0.97457 1.22602 0.96563 0.88107 0.90287 0.90467 1.86547 1.37669 1.42316 1.68398 1.23625 0.98292 1.01180 0.95623 1.83825 0.96884 1.11043 1.74644 0.92579 0.90899 0.90055 0.86403 0.77444 1.18864 1.17644 0.74581 0.91878 0.92785 0.77178 0.87318 0.89631 0.76927 0.89100 0.86947 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 -0.05 8.91 36.01 0.32 0.27 16 2 C -0.25 -0.71 6.50 -36.02 -0.23 -0.94 16 3 C 0.07 0.27 5.91 -84.18 -0.50 -0.23 16 4 C -0.03 -0.08 2.94 36.01 0.11 0.02 16 5 O -0.54 -0.62 10.17 -35.23 -0.36 -0.98 16 6 Si 0.72 1.68 32.09 -169.99 -5.45 -3.78 16 7 N -0.55 -2.79 8.95 -11.37 -0.10 -2.89 16 8 C 0.34 1.23 7.80 -87.69 -0.68 0.55 16 9 N -0.65 -1.20 4.49 -48.80 -0.22 -1.42 16 10 C 0.16 -0.12 0.78 -131.00 -0.10 -0.22 16 11 C 0.07 -0.10 6.26 37.16 0.23 0.13 16 12 O -0.56 0.08 13.34 -35.23 -0.47 -0.39 16 13 C -0.16 0.40 7.19 -25.92 -0.19 0.22 16 14 C 0.08 -0.17 5.28 -25.92 -0.14 -0.30 16 15 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 16 O -0.54 0.10 13.09 -35.23 -0.46 -0.37 16 17 C -0.15 0.21 6.56 -25.92 -0.17 0.04 16 18 S 0.09 0.17 19.01 -107.50 -2.04 -1.87 16 19 H 0.06 0.01 8.14 -51.93 -0.42 -0.41 16 20 H 0.07 0.12 8.14 -51.93 -0.42 -0.31 16 21 H 0.08 -0.02 6.40 -51.93 -0.33 -0.36 16 22 H 0.12 0.35 7.96 -51.93 -0.41 -0.06 16 23 H 0.38 -0.88 8.13 45.56 0.37 -0.51 16 24 H -0.26 -1.17 7.11 56.52 0.40 -0.77 16 25 H -0.25 -1.51 7.11 56.52 0.40 -1.11 16 26 H 0.42 0.95 8.78 -40.82 -0.36 0.59 16 27 H 0.06 -0.23 7.86 -51.93 -0.41 -0.64 16 28 H 0.05 -0.08 6.55 -51.93 -0.34 -0.42 16 29 H 0.38 -1.51 9.12 45.56 0.42 -1.09 16 30 H 0.11 -0.45 7.91 -51.93 -0.41 -0.86 16 31 H 0.09 -0.17 8.09 -51.93 -0.42 -0.59 16 32 H 0.38 -1.54 9.12 45.56 0.42 -1.13 16 33 H 0.09 0.07 6.78 -51.93 -0.35 -0.28 16 34 H 0.11 -0.43 8.10 -51.93 -0.42 -0.85 16 LS Contribution 292.71 15.07 4.41 4.41 Total: 0.00 -8.50 292.71 -8.77 -17.27 By element: Atomic # 1 Polarization: -6.77 SS G_CDS: -2.72 Total: -9.49 kcal Atomic # 6 Polarization: 0.87 SS G_CDS: -1.35 Total: -0.48 kcal Atomic # 7 Polarization: -3.99 SS G_CDS: -0.32 Total: -4.32 kcal Atomic # 8 Polarization: -0.45 SS G_CDS: -1.29 Total: -1.74 kcal Atomic # 14 Polarization: 1.68 SS G_CDS: -5.45 Total: -3.78 kcal Atomic # 16 Polarization: 0.17 SS G_CDS: -2.04 Total: -1.87 kcal Total LS contribution 4.41 Total: 4.41 kcal Total: -8.50 -8.77 -17.27 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_18341544_15704122.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -22.001 kcal (2) G-P(sol) polarization free energy of solvation -8.496 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -30.497 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.770 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.266 kcal (6) G-S(sol) free energy of system = (1) + (5) -39.267 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds