Wall clock time and date at job start Mon Mar 8 2021 07:48:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86299 * 109.47254 * 2 1 4 4 C 1.50697 * 109.46695 * 240.00040 * 2 1 3 5 5 C 1.37990 * 120.32674 * 120.02312 * 4 2 1 6 6 N 1.32001 * 120.90024 * 179.97438 * 5 4 2 7 7 C 1.32343 * 121.65194 * 359.72593 * 6 5 4 8 8 N 1.39139 * 119.72334 * 180.26521 * 7 6 5 9 9 C 1.46506 * 120.00126 * 355.02212 * 8 7 6 10 10 C 1.53003 * 112.84381 * 294.73340 * 9 8 7 11 11 O 1.42897 * 109.47430 * 305.15623 * 10 9 8 12 12 C 1.53778 * 113.61626 * 65.92530 * 9 8 7 13 13 C 1.53777 * 87.08103 * 139.98168 * 12 9 8 14 14 H 1.09003 * 113.61079 * 89.11744 * 13 12 9 15 15 O 1.42898 * 113.61857 * 219.93278 * 13 12 9 16 16 C 1.53778 * 113.61645 * 163.53806 * 9 8 7 17 17 C 1.39349 * 120.55746 * 0.53995 * 7 6 5 18 18 F 1.35102 * 120.46805 * 179.75120 * 17 7 6 19 19 C 1.38442 * 119.05754 * 359.47778 * 17 7 6 20 20 H 0.96699 * 113.99935 * 299.99994 * 1 2 3 21 21 H 1.08996 * 109.47007 * 120.00679 * 2 1 3 22 22 H 1.48503 * 109.99792 * 178.68158 * 3 2 1 23 23 H 1.48496 * 110.00085 * 300.00253 * 3 2 1 24 24 H 1.07999 * 119.54431 * 359.97438 * 5 4 2 25 25 H 0.96995 * 120.00495 * 175.01920 * 8 7 6 26 26 H 1.09002 * 109.47204 * 65.16594 * 10 9 8 27 27 H 1.09007 * 109.46665 * 185.15747 * 10 9 8 28 28 H 0.96696 * 113.99917 * 180.02562 * 11 10 9 29 29 H 1.08998 * 113.61897 * 254.53791 * 12 9 8 30 30 H 1.09005 * 113.60916 * 25.35278 * 12 9 8 31 31 H 0.96701 * 114.00353 * 179.97438 * 15 13 12 32 32 H 1.09001 * 113.61174 * 334.56576 * 16 9 8 33 33 H 1.09004 * 113.61480 * 105.46959 * 16 9 8 34 34 H 1.07998 * 120.75586 * 180.27938 * 19 17 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7104 -1.2305 5 6 2.7253 -0.0465 -2.1430 6 7 3.1718 -0.6578 -3.2243 7 6 2.8837 -1.9250 -3.4746 8 7 3.3804 -2.5314 -4.6242 9 6 4.1266 -1.7401 -5.6058 10 6 3.2678 -0.6699 -6.2825 11 8 2.1135 -1.2815 -6.8619 12 6 5.4691 -1.2087 -5.0764 13 6 6.0555 -1.5396 -6.4589 14 1 5.9717 -0.7226 -7.1756 15 8 7.3700 -2.0973 -6.4046 16 6 4.9404 -2.5925 -6.5937 17 6 2.0824 -2.6556 -2.5994 18 9 1.7852 -3.9476 -2.8593 19 6 1.5997 -2.0402 -1.4571 20 1 -0.3933 0.4417 0.7650 21 1 1.7923 -0.5139 0.8899 22 1 3.5347 1.7702 0.0321 23 1 1.5615 2.4679 -1.2084 24 1 2.9850 0.9875 -1.9701 25 1 3.2328 -3.4780 -4.7758 26 1 2.9557 0.0671 -5.5425 27 1 3.8486 -0.1778 -7.0627 28 1 1.5224 -0.6607 -7.3095 29 1 5.4581 -0.1425 -4.8504 30 1 5.8878 -1.8084 -4.2682 31 1 7.7441 -2.3079 -7.2712 32 1 5.2151 -3.5719 -6.2021 33 1 4.5033 -2.6416 -7.5911 34 1 0.9801 -2.5818 -0.7578 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_18341544_17656566.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:48:32 Heat of formation + Delta-G solvation = -90.925937 kcal Electronic energy + Delta-G solvation = -21492.293703 eV Core-core repulsion = 17921.897728 eV Total energy + Delta-G solvation = -3570.395975 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 271.105 amu Computer time = 0.35 seconds Orbital eigenvalues (eV) -49.80119 -41.71581 -40.71480 -37.97853 -37.55952 -36.45286 -34.83078 -33.18391 -31.24855 -28.22459 -27.15295 -26.38570 -25.09870 -23.53617 -22.60654 -20.13750 -19.35255 -19.03809 -18.49457 -18.17701 -17.93455 -17.85835 -16.84710 -16.74010 -16.35883 -16.27821 -15.52716 -15.41569 -14.99183 -14.79808 -14.57720 -14.34687 -14.00767 -13.91147 -13.68494 -13.39963 -13.19713 -13.13005 -12.52353 -12.07436 -11.89432 -11.68727 -11.42422 -11.08383 -10.93805 -10.66289 -10.55643 -10.31102 -8.71230 -5.04342 -0.03855 0.17386 1.21379 1.58753 1.89333 1.93631 2.56046 2.89698 3.06817 3.17210 3.24044 3.30624 3.37570 3.58957 3.66195 3.68960 3.86263 3.95879 4.05831 4.24327 4.28442 4.31888 4.53143 4.56897 4.65541 4.68643 4.73481 4.91761 4.98854 5.01486 5.07996 5.40664 5.99729 6.20766 6.57492 6.58855 6.61021 6.98665 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.059 4.059 3 Si 0.682 3.318 4 C -0.165 4.165 5 C 0.140 3.860 6 N -0.510 5.510 7 C 0.396 3.604 8 N -0.693 5.693 9 C 0.170 3.830 10 C 0.083 3.917 11 O -0.566 6.566 12 C -0.115 4.115 13 C 0.077 3.923 14 H 0.087 0.913 15 O -0.555 6.555 16 C -0.165 4.165 17 C -0.017 4.017 18 F -0.132 7.132 19 C -0.035 4.035 20 H 0.383 0.617 21 H 0.076 0.924 22 H -0.251 1.251 23 H -0.248 1.248 24 H 0.153 0.847 25 H 0.415 0.585 26 H 0.065 0.935 27 H 0.056 0.944 28 H 0.381 0.619 29 H 0.085 0.915 30 H 0.097 0.903 31 H 0.381 0.619 32 H 0.098 0.902 33 H 0.083 0.917 34 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.158 3.349 1.209 3.564 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.353 6.353 2 C -0.170 4.170 3 Si 0.583 3.417 4 C -0.170 4.170 5 C -0.017 4.017 6 N -0.227 5.227 7 C 0.157 3.843 8 N -0.325 5.325 9 C 0.083 3.917 10 C 0.004 3.996 11 O -0.372 6.372 12 C -0.154 4.154 13 C 0.018 3.982 14 H 0.104 0.896 15 O -0.361 6.361 16 C -0.204 4.204 17 C -0.043 4.043 18 F -0.111 7.111 19 C -0.061 4.061 20 H 0.231 0.769 21 H 0.094 0.906 22 H -0.176 1.176 23 H -0.172 1.172 24 H 0.170 0.830 25 H 0.253 0.747 26 H 0.083 0.917 27 H 0.074 0.926 28 H 0.228 0.772 29 H 0.104 0.896 30 H 0.115 0.885 31 H 0.228 0.772 32 H 0.116 0.884 33 H 0.102 0.898 34 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 1.218 3.675 0.364 3.889 hybrid contribution -0.865 -1.194 -0.481 1.551 sum 0.354 2.481 -0.117 2.509 Atomic orbital electron populations 1.86495 1.17236 1.81846 1.49764 1.24465 0.85702 1.10172 0.96663 0.95119 0.80878 0.77977 0.87770 1.19908 1.03842 0.94432 0.98834 1.22106 0.92936 0.98551 0.88136 1.67282 1.26312 1.07736 1.21325 1.18390 0.89717 0.89048 0.87097 1.44316 1.58777 1.11384 1.18030 1.21272 0.89118 0.92543 0.88788 1.22284 0.87119 0.94085 0.96152 1.86460 1.36092 1.38911 1.75714 1.23340 0.92341 1.03056 0.96642 1.23257 0.81665 0.94881 0.98438 0.89561 1.86547 1.30469 1.84351 1.34683 1.24026 0.96465 0.99775 1.00089 1.17977 1.06197 0.81151 0.99007 1.91494 1.92154 1.33456 1.93988 1.21240 0.95921 0.94191 0.94735 0.76889 0.90610 1.17576 1.17240 0.83041 0.74674 0.91657 0.92612 0.77189 0.89615 0.88479 0.77153 0.88402 0.89815 0.83166 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.17 12.75 -35.23 -0.45 -0.27 16 2 C -0.06 0.04 2.83 36.00 0.10 0.14 16 3 Si 0.68 -1.23 29.82 -169.99 -5.07 -6.30 16 4 C -0.16 -0.36 5.43 -104.47 -0.57 -0.93 16 5 C 0.14 0.39 9.84 -17.57 -0.17 0.22 16 6 N -0.51 -1.85 7.79 -12.36 -0.10 -1.94 16 7 C 0.40 1.46 7.16 -154.86 -1.11 0.35 16 8 N -0.69 -1.67 5.26 -46.89 -0.25 -1.92 16 9 C 0.17 0.20 0.84 -131.00 -0.11 0.09 16 10 C 0.08 0.07 6.19 37.16 0.23 0.30 16 11 O -0.57 -0.87 13.53 -35.23 -0.48 -1.35 16 12 C -0.12 -0.15 6.43 -25.92 -0.17 -0.32 16 13 C 0.08 -0.01 4.86 -25.83 -0.13 -0.13 16 14 H 0.09 -0.16 7.61 -51.93 -0.40 -0.55 16 15 O -0.56 -0.49 13.68 -35.23 -0.48 -0.97 16 16 C -0.17 0.00 7.23 -25.83 -0.19 -0.19 16 17 C -0.02 -0.06 7.35 -39.09 -0.29 -0.35 16 18 F -0.13 -0.54 16.66 2.25 0.04 -0.50 16 19 C -0.03 -0.09 9.75 -39.26 -0.38 -0.48 16 20 H 0.38 -2.06 8.74 45.56 0.40 -1.66 16 21 H 0.08 -0.18 7.96 -51.93 -0.41 -0.59 16 22 H -0.25 -0.12 7.11 56.52 0.40 0.28 16 23 H -0.25 -0.31 7.11 56.52 0.40 0.09 16 24 H 0.15 0.24 4.88 -52.49 -0.26 -0.02 16 25 H 0.42 0.74 8.18 -40.82 -0.33 0.40 16 26 H 0.07 0.12 7.00 -51.93 -0.36 -0.24 16 27 H 0.06 -0.06 7.32 -51.93 -0.38 -0.44 16 28 H 0.38 -0.87 9.12 45.56 0.42 -0.45 16 29 H 0.09 0.11 8.10 -51.93 -0.42 -0.31 16 30 H 0.10 0.29 8.14 -51.93 -0.42 -0.14 16 31 H 0.38 -1.27 9.12 45.56 0.42 -0.85 16 32 H 0.10 0.03 8.14 -51.93 -0.42 -0.39 16 33 H 0.08 -0.03 8.10 -51.93 -0.42 -0.45 16 34 H 0.15 0.18 8.06 -52.49 -0.42 -0.24 16 LS Contribution 292.08 15.07 4.40 4.40 Total: 0.00 -8.33 292.08 -7.38 -15.71 By element: Atomic # 1 Polarization: -3.34 SS G_CDS: -2.22 Total: -5.56 kcal Atomic # 6 Polarization: 1.48 SS G_CDS: -2.78 Total: -1.30 kcal Atomic # 7 Polarization: -3.52 SS G_CDS: -0.34 Total: -3.86 kcal Atomic # 8 Polarization: -1.19 SS G_CDS: -1.41 Total: -2.59 kcal Atomic # 9 Polarization: -0.54 SS G_CDS: 0.04 Total: -0.50 kcal Atomic # 14 Polarization: -1.23 SS G_CDS: -5.07 Total: -6.30 kcal Total LS contribution 4.40 Total: 4.40 kcal Total: -8.33 -7.38 -15.71 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_18341544_17656566.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -75.217 kcal (2) G-P(sol) polarization free energy of solvation -8.332 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -83.549 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.377 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.709 kcal (6) G-S(sol) free energy of system = (1) + (5) -90.926 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.35 seconds