Wall clock time and date at job start Mon Mar 8 2021 07:48:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86299 * 109.47254 * 2 1 4 4 C 1.50697 * 109.46695 * 240.00040 * 2 1 3 5 5 C 1.37990 * 120.32674 * 120.02312 * 4 2 1 6 6 N 1.32001 * 120.90024 * 179.97438 * 5 4 2 7 7 C 1.32343 * 121.65194 * 359.72593 * 6 5 4 8 8 N 1.39139 * 119.72334 * 180.26521 * 7 6 5 9 9 C 1.46506 * 120.00126 * 355.02212 * 8 7 6 10 10 C 1.53003 * 112.84381 * 294.73340 * 9 8 7 11 11 O 1.42897 * 109.47430 * 305.15623 * 10 9 8 12 12 C 1.53778 * 113.61626 * 65.92530 * 9 8 7 13 13 C 1.53777 * 87.08103 * 139.98168 * 12 9 8 14 14 H 1.09003 * 113.61079 * 89.11744 * 13 12 9 15 15 O 1.42898 * 113.61857 * 219.93278 * 13 12 9 16 16 C 1.53778 * 113.61645 * 163.53806 * 9 8 7 17 17 C 1.39349 * 120.55746 * 0.53995 * 7 6 5 18 18 F 1.35102 * 120.46805 * 179.75120 * 17 7 6 19 19 C 1.38442 * 119.05754 * 359.47778 * 17 7 6 20 20 H 0.96699 * 113.99935 * 299.99994 * 1 2 3 21 21 H 1.08996 * 109.47007 * 120.00679 * 2 1 3 22 22 H 1.48503 * 109.99792 * 178.68158 * 3 2 1 23 23 H 1.48496 * 110.00085 * 300.00253 * 3 2 1 24 24 H 1.07999 * 119.54431 * 359.97438 * 5 4 2 25 25 H 0.96995 * 120.00495 * 175.01920 * 8 7 6 26 26 H 1.09002 * 109.47204 * 65.16594 * 10 9 8 27 27 H 1.09007 * 109.46665 * 185.15747 * 10 9 8 28 28 H 0.96696 * 113.99917 * 180.02562 * 11 10 9 29 29 H 1.08998 * 113.61897 * 254.53791 * 12 9 8 30 30 H 1.09005 * 113.60916 * 25.35278 * 12 9 8 31 31 H 0.96701 * 114.00353 * 179.97438 * 15 13 12 32 32 H 1.09001 * 113.61174 * 334.56576 * 16 9 8 33 33 H 1.09004 * 113.61480 * 105.46959 * 16 9 8 34 34 H 1.07998 * 120.75586 * 180.27938 * 19 17 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7104 -1.2305 5 6 2.7253 -0.0465 -2.1430 6 7 3.1718 -0.6578 -3.2243 7 6 2.8837 -1.9250 -3.4746 8 7 3.3804 -2.5314 -4.6242 9 6 4.1266 -1.7401 -5.6058 10 6 3.2678 -0.6699 -6.2825 11 8 2.1135 -1.2815 -6.8619 12 6 5.4691 -1.2087 -5.0764 13 6 6.0555 -1.5396 -6.4589 14 1 5.9717 -0.7226 -7.1756 15 8 7.3700 -2.0973 -6.4046 16 6 4.9404 -2.5925 -6.5937 17 6 2.0824 -2.6556 -2.5994 18 9 1.7852 -3.9476 -2.8593 19 6 1.5997 -2.0402 -1.4571 20 1 -0.3933 0.4417 0.7650 21 1 1.7923 -0.5139 0.8899 22 1 3.5347 1.7702 0.0321 23 1 1.5615 2.4679 -1.2084 24 1 2.9850 0.9875 -1.9701 25 1 3.2328 -3.4780 -4.7758 26 1 2.9557 0.0671 -5.5425 27 1 3.8486 -0.1778 -7.0627 28 1 1.5224 -0.6607 -7.3095 29 1 5.4581 -0.1425 -4.8504 30 1 5.8878 -1.8084 -4.2682 31 1 7.7441 -2.3079 -7.2712 32 1 5.2151 -3.5719 -6.2021 33 1 4.5033 -2.6416 -7.5911 34 1 0.9801 -2.5818 -0.7578 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_18341544_17656566.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:48:31 Heat of formation + Delta-G solvation = -96.810755 kcal Electronic energy + Delta-G solvation = -21492.548888 eV Core-core repulsion = 17921.897728 eV Total energy + Delta-G solvation = -3570.651160 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 271.105 amu Computer time = 0.37 seconds Orbital eigenvalues (eV) -50.07335 -41.84512 -40.80853 -37.96084 -37.58436 -36.51745 -34.92102 -33.36748 -31.37957 -28.27674 -27.21106 -26.44602 -25.26900 -23.60605 -22.72728 -20.22463 -19.51742 -19.08163 -18.47656 -18.24212 -18.10303 -17.96487 -17.05694 -16.84752 -16.44932 -16.34658 -15.57794 -15.46698 -15.06561 -14.89151 -14.70793 -14.43835 -14.15274 -13.99186 -13.72732 -13.49068 -13.29242 -13.19692 -12.54770 -12.10175 -11.93805 -11.70162 -11.54185 -11.16938 -10.97142 -10.83278 -10.70188 -10.25103 -8.88819 -4.92738 -0.25736 -0.00896 1.30915 1.68083 1.79766 1.97732 2.37312 2.86389 2.89773 3.06647 3.20707 3.31402 3.33193 3.59586 3.61040 3.64565 3.73708 3.96498 4.02728 4.21712 4.29286 4.32831 4.42824 4.50243 4.58467 4.61076 4.67573 4.86625 4.86795 4.92703 5.03534 5.25317 5.85785 6.02378 6.70988 6.79331 6.81368 6.93880 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.566 6.566 2 C -0.066 4.066 3 Si 0.774 3.226 4 C -0.171 4.171 5 C 0.127 3.873 6 N -0.518 5.518 7 C 0.384 3.616 8 N -0.694 5.694 9 C 0.164 3.836 10 C 0.085 3.915 11 O -0.584 6.584 12 C -0.119 4.119 13 C 0.085 3.915 14 H 0.109 0.891 15 O -0.576 6.576 16 C -0.157 4.157 17 C -0.035 4.035 18 F -0.138 7.138 19 C -0.037 4.037 20 H 0.405 0.595 21 H 0.099 0.901 22 H -0.282 1.282 23 H -0.292 1.292 24 H 0.159 0.841 25 H 0.415 0.585 26 H 0.051 0.949 27 H 0.079 0.921 28 H 0.396 0.604 29 H 0.083 0.917 30 H 0.075 0.925 31 H 0.398 0.602 32 H 0.091 0.909 33 H 0.091 0.909 34 H 0.164 0.836 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.323 3.794 1.336 4.036 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.376 6.376 2 C -0.176 4.176 3 Si 0.679 3.321 4 C -0.177 4.177 5 C -0.030 4.030 6 N -0.236 5.236 7 C 0.146 3.854 8 N -0.326 5.326 9 C 0.077 3.923 10 C 0.006 3.994 11 O -0.392 6.392 12 C -0.157 4.157 13 C 0.026 3.974 14 H 0.127 0.873 15 O -0.385 6.385 16 C -0.195 4.195 17 C -0.061 4.061 18 F -0.117 7.117 19 C -0.063 4.063 20 H 0.257 0.743 21 H 0.117 0.883 22 H -0.209 1.209 23 H -0.220 1.220 24 H 0.176 0.824 25 H 0.253 0.747 26 H 0.069 0.931 27 H 0.097 0.903 28 H 0.245 0.755 29 H 0.102 0.898 30 H 0.094 0.906 31 H 0.249 0.751 32 H 0.110 0.890 33 H 0.110 0.890 34 H 0.181 0.819 Dipole moment (debyes) X Y Z Total from point charges 1.036 4.114 0.501 4.272 hybrid contribution -0.817 -1.304 -0.533 1.629 sum 0.219 2.810 -0.032 2.819 Atomic orbital electron populations 1.86440 1.17154 1.82479 1.51512 1.24641 0.85943 1.10968 0.96090 0.94138 0.77602 0.75163 0.85191 1.20268 1.03284 0.94428 0.99671 1.22376 0.93305 0.99013 0.88334 1.67283 1.26657 1.07813 1.21809 1.18546 0.90055 0.89224 0.87602 1.44418 1.58677 1.11530 1.17993 1.21447 0.89055 0.92963 0.88857 1.22275 0.87172 0.93522 0.96417 1.86418 1.36709 1.40086 1.75963 1.23284 0.92899 1.02484 0.97078 1.23283 0.81249 0.95250 0.97624 0.87296 1.86501 1.30859 1.84530 1.36564 1.23960 0.96198 0.99389 0.99989 1.18180 1.07006 0.81118 0.99791 1.91469 1.92281 1.33816 1.94115 1.21464 0.95786 0.94514 0.94570 0.74325 0.88339 1.20923 1.21979 0.82427 0.74667 0.93088 0.90308 0.75485 0.89823 0.90599 0.75110 0.89031 0.88995 0.81866 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 0.91 12.75 -148.98 -1.90 -0.99 16 2 C -0.07 0.13 2.83 71.23 0.20 0.33 16 3 Si 0.77 -2.94 29.82 68.60 2.05 -0.90 16 4 C -0.17 -0.83 5.43 -19.76 -0.11 -0.94 16 5 C 0.13 0.86 9.84 84.61 0.83 1.69 16 6 N -0.52 -4.56 7.79 -193.03 -1.50 -6.06 16 7 C 0.38 3.45 7.16 133.09 0.95 4.40 16 8 N -0.69 -4.36 5.26 -302.28 -1.59 -5.95 16 9 C 0.16 0.51 0.84 4.13 0.00 0.52 16 10 C 0.09 0.15 6.19 71.98 0.45 0.60 16 11 O -0.58 -1.88 13.53 -148.98 -2.02 -3.89 16 12 C -0.12 -0.43 6.43 31.12 0.20 -0.23 16 13 C 0.09 -0.04 4.86 31.18 0.15 0.11 16 14 H 0.11 -0.55 7.61 -2.39 -0.02 -0.57 16 15 O -0.58 -0.92 13.68 -148.98 -2.04 -2.95 16 16 C -0.16 -0.01 7.23 31.18 0.23 0.21 16 17 C -0.03 -0.30 7.35 22.59 0.17 -0.14 16 18 F -0.14 -1.31 16.66 44.97 0.75 -0.57 16 19 C -0.04 -0.22 9.75 22.48 0.22 0.00 16 20 H 0.41 -4.97 8.74 -74.06 -0.65 -5.62 16 21 H 0.10 -0.62 7.96 -2.39 -0.02 -0.64 16 22 H -0.28 -0.36 7.11 99.48 0.71 0.35 16 23 H -0.29 -1.02 7.11 99.48 0.71 -0.32 16 24 H 0.16 0.69 4.88 -2.91 -0.01 0.67 16 25 H 0.42 2.16 8.18 -92.71 -0.76 1.40 16 26 H 0.05 0.24 7.00 -2.39 -0.02 0.22 16 27 H 0.08 -0.25 7.32 -2.38 -0.02 -0.27 16 28 H 0.40 -1.79 9.12 -74.06 -0.68 -2.47 16 29 H 0.08 0.30 8.10 -2.39 -0.02 0.28 16 30 H 0.08 0.60 8.14 -2.38 -0.02 0.58 16 31 H 0.40 -2.90 9.12 -74.06 -0.68 -3.57 16 32 H 0.09 0.12 8.14 -2.39 -0.02 0.11 16 33 H 0.09 -0.13 8.10 -2.39 -0.02 -0.15 16 34 H 0.16 0.41 8.06 -2.91 -0.02 0.39 16 Total: 0.00 -19.88 292.08 -4.49 -24.37 By element: Atomic # 1 Polarization: -8.08 SS G_CDS: -1.53 Total: -9.61 kcal Atomic # 6 Polarization: 3.26 SS G_CDS: 3.29 Total: 6.55 kcal Atomic # 7 Polarization: -8.92 SS G_CDS: -3.09 Total: -12.01 kcal Atomic # 8 Polarization: -1.88 SS G_CDS: -5.95 Total: -7.83 kcal Atomic # 9 Polarization: -1.31 SS G_CDS: 0.75 Total: -0.57 kcal Atomic # 14 Polarization: -2.94 SS G_CDS: 2.05 Total: -0.90 kcal Total: -19.88 -4.49 -24.37 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_18341544_17656566.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -72.441 kcal (2) G-P(sol) polarization free energy of solvation -19.879 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -92.319 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.491 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.370 kcal (6) G-S(sol) free energy of system = (1) + (5) -96.811 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.37 seconds