Wall clock time and date at job start Mon Mar 8 2021 07:48:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42895 * 1 3 3 C 1.42900 * 114.00193 * 2 1 4 4 H 1.08997 * 112.84974 * 18.80482 * 3 2 1 5 5 C 1.53780 * 113.61677 * 150.00112 * 3 2 1 6 6 C 1.53787 * 87.08331 * 89.20101 * 5 3 2 7 7 C 1.52994 * 113.61473 * 140.06369 * 6 5 3 8 8 O 1.42902 * 109.46859 * 186.79883 * 7 6 5 9 9 N 1.46499 * 113.61502 * 270.88946 * 6 5 3 10 10 C 1.39004 * 119.99885 * 301.52063 * 9 6 5 11 11 N 1.32392 * 119.70864 * 174.64590 * 10 9 6 12 12 C 1.31973 * 121.62445 * 180.02562 * 11 10 9 13 13 C 1.38017 * 120.85591 * 0.02562 * 12 11 10 14 14 C 1.50701 * 120.33609 * 180.02562 * 13 12 11 15 15 O 1.42903 * 109.47035 * 119.97371 * 14 13 12 16 16 Si 1.86299 * 109.47107 * 359.97438 * 14 13 12 17 17 C 1.38883 * 119.33247 * 359.97438 * 13 12 11 18 18 C 1.38301 * 118.50451 * 0.25890 * 17 13 12 19 19 C 1.53785 * 113.69388 * 247.53841 * 3 2 1 20 20 H 1.09002 * 109.46993 * 180.02562 * 1 2 3 21 21 H 1.09003 * 109.46653 * 299.99951 * 1 2 3 22 22 H 1.08995 * 109.47538 * 59.99514 * 1 2 3 23 23 H 1.09000 * 113.61314 * 334.65739 * 5 3 2 24 24 H 1.08994 * 113.61756 * 203.75073 * 5 3 2 25 25 H 1.08999 * 109.47468 * 306.80167 * 7 6 5 26 26 H 1.09001 * 109.47147 * 66.80098 * 7 6 5 27 27 H 0.96703 * 113.99485 * 180.02562 * 8 7 6 28 28 H 0.97003 * 120.00281 * 121.52230 * 9 6 5 29 29 H 1.07996 * 119.57014 * 179.97438 * 12 11 10 30 30 H 1.08995 * 109.47533 * 239.97644 * 14 13 12 31 31 H 0.96697 * 114.00146 * 300.00746 * 15 14 13 32 32 H 1.48501 * 110.00295 * 58.67773 * 16 14 13 33 33 H 1.48493 * 110.00149 * 179.97438 * 16 14 13 34 34 H 1.07999 * 120.75198 * 179.97438 * 17 13 12 35 35 H 1.07996 * 120.45596 * 179.72347 * 18 17 13 36 36 H 1.08988 * 113.61706 * 156.32501 * 19 3 2 37 37 H 1.09003 * 113.60987 * 25.41958 * 19 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 1 1.3138 2.0788 0.3238 5 6 3.3755 1.3719 0.7045 6 6 4.0063 1.0352 -0.6571 7 6 5.2916 1.8131 -0.9462 8 8 5.7137 1.5542 -2.2867 9 7 4.1447 -0.4028 -0.9003 10 6 4.8872 -1.1873 -0.0254 11 7 4.9214 -2.5006 -0.1895 12 6 5.6134 -3.2812 0.6188 13 6 6.3309 -2.7513 1.6720 14 6 7.1176 -3.6536 2.5875 15 8 8.4993 -3.2919 2.5408 16 14 6.9198 -5.4223 2.0366 17 6 6.3215 -1.3781 1.8790 18 6 5.5833 -0.5859 1.0187 19 6 2.7531 1.6511 -1.3014 20 1 -0.3633 -1.0277 0.0005 21 1 -0.3633 0.5139 0.8900 22 1 -0.3634 0.5139 -0.8899 23 1 3.5176 0.5948 1.4555 24 1 3.6305 2.3666 1.0698 25 1 5.1060 2.8802 -0.8234 26 1 6.0710 1.4978 -0.2526 27 1 6.5250 2.0157 -2.5396 28 1 3.7182 -0.8075 -1.6718 29 1 5.6177 -4.3486 0.4544 30 1 6.7485 -3.5474 3.6075 31 1 8.8949 -3.3626 1.6613 32 1 7.3900 -5.5737 0.6361 33 1 7.6913 -6.3222 2.9310 34 1 6.8744 -0.9390 2.6963 35 1 5.5501 0.4851 1.1532 36 1 2.8379 2.7222 -1.4844 37 1 2.3926 1.0995 -2.1696 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_18341584_13915762.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:48:37 Heat of formation + Delta-G solvation = -36.647534 kcal Electronic energy + Delta-G solvation = -21177.859439 eV Core-core repulsion = 17923.733508 eV Total energy + Delta-G solvation = -3254.125931 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 267.130 amu Computer time = 0.37 seconds Orbital eigenvalues (eV) -41.89698 -40.64466 -38.25937 -37.77951 -36.71663 -34.71688 -33.19289 -31.12398 -29.06500 -27.48160 -27.10255 -26.18733 -24.37971 -23.51418 -22.46779 -20.48680 -18.62279 -18.40087 -18.22700 -17.70477 -17.50487 -16.78026 -16.41190 -16.18276 -16.12593 -15.97644 -15.58526 -15.21466 -14.76071 -14.58986 -14.21779 -13.90213 -13.75483 -13.49253 -13.35699 -13.11074 -12.85670 -12.37886 -12.30012 -12.05905 -11.87384 -11.69344 -11.03714 -10.89152 -10.59260 -10.57315 -10.41998 -10.20535 -8.52208 -4.88173 0.39211 0.56962 1.38663 1.67434 2.03858 2.09310 2.61857 2.86670 2.98826 3.36975 3.46139 3.50469 3.57433 3.76044 3.88564 3.97117 4.05309 4.16087 4.21368 4.26215 4.35001 4.39549 4.40652 4.45603 4.50366 4.65196 4.68439 4.69682 4.76724 4.86975 4.89697 4.93841 5.12750 5.41949 5.66159 6.13654 6.22637 6.49145 6.58483 6.72578 7.34084 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.359 6.359 3 C 0.066 3.934 4 H 0.080 0.920 5 C -0.153 4.153 6 C 0.168 3.832 7 C 0.068 3.932 8 O -0.563 6.563 9 N -0.679 5.679 10 C 0.424 3.576 11 N -0.539 5.539 12 C 0.159 3.841 13 C -0.240 4.240 14 C -0.057 4.057 15 O -0.533 6.533 16 Si 0.677 3.323 17 C -0.007 4.007 18 C -0.247 4.247 19 C -0.149 4.149 20 H 0.088 0.912 21 H 0.043 0.957 22 H 0.042 0.958 23 H 0.092 0.908 24 H 0.107 0.893 25 H 0.058 0.942 26 H 0.053 0.947 27 H 0.380 0.620 28 H 0.410 0.590 29 H 0.153 0.847 30 H 0.115 0.885 31 H 0.375 0.625 32 H -0.259 1.259 33 H -0.256 1.256 34 H 0.133 0.867 35 H 0.133 0.867 36 H 0.106 0.894 37 H 0.084 0.916 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.801 4.387 0.671 5.248 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.067 4.067 2 O -0.277 6.277 3 C 0.007 3.993 4 H 0.098 0.902 5 C -0.191 4.191 6 C 0.079 3.921 7 C -0.011 4.011 8 O -0.368 6.368 9 N -0.309 5.309 10 C 0.188 3.812 11 N -0.256 5.256 12 C 0.001 3.999 13 C -0.246 4.246 14 C -0.168 4.168 15 O -0.339 6.339 16 Si 0.578 3.422 17 C -0.033 4.033 18 C -0.272 4.272 19 C -0.187 4.187 20 H 0.107 0.893 21 H 0.061 0.939 22 H 0.061 0.939 23 H 0.111 0.889 24 H 0.125 0.875 25 H 0.076 0.924 26 H 0.071 0.929 27 H 0.227 0.773 28 H 0.247 0.753 29 H 0.170 0.830 30 H 0.133 0.867 31 H 0.222 0.778 32 H -0.184 1.184 33 H -0.181 1.181 34 H 0.151 0.849 35 H 0.151 0.849 36 H 0.124 0.876 37 H 0.103 0.897 Dipole moment (debyes) X Y Z Total from point charges -3.427 3.056 0.361 4.605 hybrid contribution 1.538 1.447 -0.105 2.114 sum -1.889 4.503 0.256 4.890 Atomic orbital electron populations 1.22850 0.80675 1.03130 1.00032 1.87980 1.19731 1.25600 1.94393 1.22982 0.94339 0.86020 0.95909 0.90191 1.23778 0.94852 1.03655 0.96811 1.21121 0.93279 0.80894 0.96840 1.22689 0.95997 0.97883 0.84574 1.86512 1.47202 1.73850 1.29208 1.43812 1.54504 1.04665 1.27964 1.18265 0.87622 0.87699 0.87641 1.67145 1.23843 1.03649 1.30956 1.22182 0.90277 0.98546 0.88922 1.20864 1.06500 0.95769 1.01420 1.24725 0.81929 1.07237 1.02916 1.86578 1.22886 1.89158 1.35308 0.95152 0.91777 0.75530 0.79698 1.21148 0.93210 0.92457 0.96445 1.21588 1.04984 1.01119 0.99464 1.23716 0.94394 1.01871 0.98738 0.89345 0.93879 0.93897 0.88923 0.87503 0.92436 0.92916 0.77337 0.75323 0.83013 0.86697 0.77781 1.18365 1.18148 0.84901 0.84930 0.87618 0.89738 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.85 101.05 1.10 1.07 16 2 O -0.36 -0.51 10.14 -35.23 -0.36 -0.86 16 3 C 0.07 -0.06 4.37 -25.92 -0.11 -0.17 16 4 H 0.08 -0.19 7.87 -51.93 -0.41 -0.60 16 5 C -0.15 0.21 5.90 -25.92 -0.15 0.06 16 6 C 0.17 -0.06 0.66 -131.00 -0.09 -0.14 16 7 C 0.07 -0.08 6.20 37.15 0.23 0.15 16 8 O -0.56 -0.22 13.54 -35.23 -0.48 -0.70 16 9 N -0.68 -1.37 4.68 -46.97 -0.22 -1.59 16 10 C 0.42 1.38 7.32 -155.02 -1.13 0.24 16 11 N -0.54 -2.36 10.39 -12.44 -0.13 -2.49 16 12 C 0.16 0.40 9.84 -17.57 -0.17 0.23 16 13 C -0.24 -0.38 5.40 -104.46 -0.56 -0.95 16 14 C -0.06 -0.04 2.84 36.01 0.10 0.07 16 15 O -0.53 -1.01 12.78 -35.23 -0.45 -1.46 16 16 Si 0.68 -0.01 29.82 -169.99 -5.07 -5.08 16 17 C -0.01 -0.01 9.76 -39.32 -0.38 -0.39 16 18 C -0.25 -0.42 7.36 -39.22 -0.29 -0.71 16 19 C -0.15 0.18 7.22 -25.91 -0.19 -0.01 16 20 H 0.09 -0.11 8.14 -51.93 -0.42 -0.53 16 21 H 0.04 -0.07 8.14 -51.93 -0.42 -0.50 16 22 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 23 H 0.09 0.03 6.43 -51.93 -0.33 -0.30 16 24 H 0.11 -0.40 8.10 -51.93 -0.42 -0.82 16 25 H 0.06 -0.18 8.09 -51.93 -0.42 -0.60 16 26 H 0.05 -0.06 5.98 -51.93 -0.31 -0.37 16 27 H 0.38 -1.29 9.12 45.56 0.42 -0.87 16 28 H 0.41 1.14 8.84 -40.82 -0.36 0.78 16 29 H 0.15 0.08 4.88 -52.49 -0.26 -0.18 16 30 H 0.12 -0.02 7.96 -51.93 -0.41 -0.43 16 31 H 0.37 -0.24 8.70 45.56 0.40 0.15 16 32 H -0.26 -0.54 7.11 56.52 0.40 -0.14 16 33 H -0.26 -0.78 7.11 56.52 0.40 -0.38 16 34 H 0.13 0.03 8.06 -52.49 -0.42 -0.39 16 35 H 0.13 -0.01 4.44 -52.49 -0.23 -0.24 16 36 H 0.11 -0.30 8.07 -51.94 -0.42 -0.72 16 37 H 0.08 -0.01 8.11 -51.93 -0.42 -0.43 16 LS Contribution 302.35 15.07 4.56 4.56 Total: 0.00 -7.37 302.35 -7.87 -15.24 By element: Atomic # 1 Polarization: -2.98 SS G_CDS: -4.07 Total: -7.05 kcal Atomic # 6 Polarization: 1.09 SS G_CDS: -1.65 Total: -0.56 kcal Atomic # 7 Polarization: -3.73 SS G_CDS: -0.35 Total: -4.08 kcal Atomic # 8 Polarization: -1.74 SS G_CDS: -1.28 Total: -3.02 kcal Atomic # 14 Polarization: -0.01 SS G_CDS: -5.07 Total: -5.08 kcal Total LS contribution 4.56 Total: 4.56 kcal Total: -7.37 -7.87 -15.24 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_18341584_13915762.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -21.407 kcal (2) G-P(sol) polarization free energy of solvation -7.366 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -28.773 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.875 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.241 kcal (6) G-S(sol) free energy of system = (1) + (5) -36.648 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.37 seconds