Wall clock time and date at job start Mon Mar 8 2021 07:48:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42908 * 1 3 3 C 1.42901 * 113.99747 * 2 1 4 4 H 1.08994 * 112.84952 * 18.80373 * 3 2 1 5 5 C 1.53780 * 113.61385 * 150.00022 * 3 2 1 6 6 C 1.53787 * 87.08129 * 89.11109 * 5 3 2 7 7 C 1.53001 * 113.60911 * 139.98194 * 6 5 3 8 8 O 1.42902 * 109.46914 * 176.26746 * 7 6 5 9 9 N 1.46491 * 113.61725 * 270.79959 * 6 5 3 10 10 C 1.39145 * 120.00296 * 293.60202 * 9 6 5 11 11 N 1.32343 * 119.71712 * 5.09864 * 10 9 6 12 12 C 1.32004 * 121.64515 * 179.75557 * 11 10 9 13 13 C 1.37980 * 120.90329 * 0.51782 * 12 11 10 14 14 C 1.50707 * 120.32834 * 179.76596 * 13 12 11 15 15 O 1.42901 * 109.46915 * 119.97874 * 14 13 12 16 16 Si 1.86305 * 109.47007 * 359.97438 * 14 13 12 17 17 C 1.38904 * 119.34866 * 359.74837 * 13 12 11 18 18 C 1.38443 * 118.48308 * 359.97438 * 17 13 12 19 19 F 1.35099 * 120.47265 * 179.97438 * 18 17 13 20 20 C 1.53785 * 113.60990 * 247.49681 * 3 2 1 21 21 H 1.09000 * 109.46715 * 180.02562 * 1 2 3 22 22 H 1.08996 * 109.47036 * 299.99708 * 1 2 3 23 23 H 1.08997 * 109.46672 * 60.00429 * 1 2 3 24 24 H 1.09006 * 113.61264 * 334.56797 * 5 3 2 25 25 H 1.08992 * 113.61567 * 203.66565 * 5 3 2 26 26 H 1.08994 * 109.47367 * 56.26156 * 7 6 5 27 27 H 1.08998 * 109.46960 * 296.25908 * 7 6 5 28 28 H 0.96695 * 114.00131 * 180.02562 * 8 7 6 29 29 H 0.97008 * 120.00123 * 113.60004 * 9 6 5 30 30 H 1.08003 * 119.54874 * 180.26336 * 12 11 10 31 31 H 1.08994 * 109.47339 * 239.97829 * 14 13 12 32 32 H 0.96705 * 113.99904 * 299.99895 * 15 14 13 33 33 H 1.48497 * 109.99839 * 58.67576 * 16 14 13 34 34 H 1.48499 * 109.99720 * 180.02562 * 16 14 13 35 35 H 1.07999 * 120.75742 * 179.97438 * 17 13 12 36 36 H 1.09000 * 113.61007 * 156.33868 * 20 3 2 37 37 H 1.08991 * 113.61469 * 25.43198 * 20 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3138 2.0788 0.3237 5 6 3.3756 1.3720 0.7045 6 6 4.0062 1.0330 -0.6565 7 6 5.2910 1.8112 -0.9474 8 8 5.8463 1.3675 -2.1871 9 7 4.1455 -0.4053 -0.8969 10 6 5.0195 -1.1592 -0.1197 11 7 5.6458 -0.5932 0.8995 12 6 6.4791 -1.2736 1.6645 13 6 6.7369 -2.6069 1.4206 14 6 7.6947 -3.3699 2.2991 15 8 7.0102 -4.4646 2.9117 16 14 8.3626 -2.2378 3.6194 17 6 6.1048 -3.2392 0.3576 18 6 5.2317 -2.5023 -0.4243 19 9 4.5956 -3.0768 -1.4685 20 6 2.7534 1.6488 -1.3018 21 1 -0.3633 -1.0277 0.0005 22 1 -0.3633 0.5138 0.8900 23 1 -0.3632 0.5138 -0.8900 24 1 3.5170 0.5958 1.4567 25 1 3.6311 2.3670 1.0685 26 1 6.0090 1.6398 -0.1456 27 1 5.0646 2.8755 -1.0111 28 1 6.6647 1.8186 -2.4354 29 1 3.6284 -0.8323 -1.5979 30 1 6.9688 -0.7787 2.4902 31 1 8.5187 -3.7491 1.6948 32 1 6.2630 -4.2006 3.4660 33 1 7.2462 -1.6890 4.4303 34 1 9.3089 -2.9782 4.4921 35 1 6.2903 -4.2819 0.1458 36 1 2.8389 2.7197 -1.4863 37 1 2.3927 1.0963 -2.1693 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_18341584_17656566.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:48:47 Heat of formation + Delta-G solvation = -82.745795 kcal Electronic energy + Delta-G solvation = -23707.701499 eV Core-core repulsion = 19982.122622 eV Total energy + Delta-G solvation = -3725.578877 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 285.121 amu Computer time = 0.38 seconds Orbital eigenvalues (eV) -49.68197 -41.69513 -40.69905 -38.25377 -37.78268 -36.63071 -34.86798 -33.03016 -31.07143 -28.88971 -27.39390 -27.02480 -26.29077 -24.87111 -23.29765 -22.66045 -20.47393 -19.27576 -18.35180 -18.20976 -17.94886 -17.59957 -17.44580 -16.81229 -16.64415 -16.37388 -16.07888 -15.97940 -15.84561 -15.35864 -15.27870 -14.81201 -14.38022 -14.21609 -13.90032 -13.68864 -13.42826 -13.35883 -13.08808 -12.75859 -12.59703 -12.28221 -12.09917 -11.98914 -11.57939 -11.03258 -10.89633 -10.69316 -10.55065 -10.42291 -10.34612 -8.55963 -4.97560 0.09859 0.28234 1.27699 1.58617 1.96397 2.03921 2.64950 2.70609 3.08984 3.19458 3.35472 3.42529 3.48624 3.57772 3.67064 3.75981 3.96471 4.04528 4.12854 4.31414 4.40054 4.41155 4.44572 4.53396 4.55956 4.57913 4.68109 4.72192 4.78940 4.81959 4.87108 5.04568 5.10039 5.12936 5.52852 6.12792 6.23849 6.35444 6.42147 6.71563 7.13345 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.364 6.364 3 C 0.060 3.940 4 H 0.079 0.921 5 C -0.135 4.135 6 C 0.177 3.823 7 C 0.075 3.925 8 O -0.566 6.566 9 N -0.672 5.672 10 C 0.407 3.593 11 N -0.513 5.513 12 C 0.146 3.854 13 C -0.214 4.214 14 C -0.060 4.060 15 O -0.531 6.531 16 Si 0.681 3.319 17 C -0.038 4.038 18 C -0.020 4.020 19 F -0.134 7.134 20 C -0.156 4.156 21 H 0.087 0.913 22 H 0.043 0.957 23 H 0.043 0.957 24 H 0.091 0.909 25 H 0.103 0.897 26 H 0.063 0.937 27 H 0.052 0.948 28 H 0.377 0.623 29 H 0.416 0.584 30 H 0.160 0.840 31 H 0.118 0.882 32 H 0.376 0.624 33 H -0.257 1.257 34 H -0.255 1.255 35 H 0.147 0.853 36 H 0.106 0.894 37 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.052 5.269 0.456 5.289 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.067 4.067 2 O -0.282 6.282 3 C 0.002 3.998 4 H 0.097 0.903 5 C -0.173 4.173 6 C 0.089 3.911 7 C -0.004 4.004 8 O -0.371 6.371 9 N -0.303 5.303 10 C 0.168 3.832 11 N -0.230 5.230 12 C -0.011 4.011 13 C -0.220 4.220 14 C -0.171 4.171 15 O -0.337 6.337 16 Si 0.582 3.418 17 C -0.065 4.065 18 C -0.047 4.047 19 F -0.113 7.113 20 C -0.194 4.194 21 H 0.105 0.895 22 H 0.062 0.938 23 H 0.061 0.939 24 H 0.109 0.891 25 H 0.121 0.879 26 H 0.081 0.919 27 H 0.070 0.930 28 H 0.224 0.776 29 H 0.254 0.746 30 H 0.177 0.823 31 H 0.136 0.864 32 H 0.224 0.776 33 H -0.182 1.182 34 H -0.180 1.180 35 H 0.164 0.836 36 H 0.124 0.876 37 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges -0.169 5.577 1.156 5.698 hybrid contribution -0.932 -1.193 -0.412 1.569 sum -1.101 4.384 0.744 4.581 Atomic orbital electron populations 1.22842 0.80721 1.03014 1.00098 1.87936 1.19738 1.26080 1.94474 1.23094 0.94788 0.85674 0.96244 0.90320 1.23538 0.93253 1.03454 0.97097 1.21052 0.92952 0.80609 0.96502 1.22512 0.95087 0.96059 0.86719 1.86499 1.44331 1.66777 1.39514 1.43889 1.43597 1.06142 1.36703 1.18340 0.89318 0.86384 0.89132 1.67347 1.11974 1.37782 1.05923 1.22291 0.92257 0.90394 0.96178 1.20781 1.04797 0.95926 1.00496 1.24806 0.96407 0.94612 1.01236 1.86604 1.48530 1.32115 1.66446 0.95190 0.83150 0.83535 0.79946 1.21228 0.92513 1.00561 0.92151 1.17980 1.02725 0.91806 0.92169 1.91485 1.80433 1.84446 1.54953 1.23835 0.95069 1.01957 0.98575 0.89481 0.93847 0.93868 0.89079 0.87908 0.91855 0.92973 0.77602 0.74617 0.82313 0.86376 0.77642 1.18162 1.17979 0.83553 0.87610 0.90041 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.85 101.05 1.10 1.08 16 2 O -0.36 -0.62 10.13 -35.23 -0.36 -0.98 16 3 C 0.06 -0.01 4.38 -25.92 -0.11 -0.13 16 4 H 0.08 -0.13 7.87 -51.93 -0.41 -0.54 16 5 C -0.13 0.02 6.76 -25.92 -0.18 -0.16 16 6 C 0.18 0.09 0.81 -131.01 -0.11 -0.02 16 7 C 0.08 -0.01 6.28 37.16 0.23 0.22 16 8 O -0.57 -0.60 13.34 -35.23 -0.47 -1.07 16 9 N -0.67 -1.48 4.48 -46.89 -0.21 -1.69 16 10 C 0.41 1.21 7.06 -154.85 -1.09 0.12 16 11 N -0.51 -1.06 7.44 -12.36 -0.09 -1.15 16 12 C 0.15 0.07 9.84 -17.57 -0.17 -0.10 16 13 C -0.21 -0.12 5.40 -104.47 -0.56 -0.68 16 14 C -0.06 0.02 2.84 36.01 0.10 0.13 16 15 O -0.53 -0.63 12.78 -35.23 -0.45 -1.08 16 16 Si 0.68 -0.95 29.82 -169.99 -5.07 -6.02 16 17 C -0.04 -0.07 9.75 -39.26 -0.38 -0.46 16 18 C -0.02 -0.07 7.35 -39.09 -0.29 -0.35 16 19 F -0.13 -0.57 16.66 2.25 0.04 -0.53 16 20 C -0.16 0.11 7.19 -25.91 -0.19 -0.08 16 21 H 0.09 -0.09 8.14 -51.93 -0.42 -0.51 16 22 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 23 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 24 H 0.09 0.19 7.23 -51.93 -0.38 -0.19 16 25 H 0.10 -0.22 8.10 -51.93 -0.42 -0.64 16 26 H 0.06 0.02 7.25 -51.93 -0.38 -0.36 16 27 H 0.05 -0.10 7.87 -51.93 -0.41 -0.51 16 28 H 0.38 -1.03 9.12 45.56 0.42 -0.61 16 29 H 0.42 1.03 8.14 -40.82 -0.33 0.70 16 30 H 0.16 -0.30 4.88 -52.48 -0.26 -0.55 16 31 H 0.12 -0.13 7.96 -51.93 -0.41 -0.54 16 32 H 0.38 -0.56 8.70 45.56 0.40 -0.16 16 33 H -0.26 -0.11 7.11 56.52 0.40 0.29 16 34 H -0.25 -0.50 7.11 56.52 0.40 -0.10 16 35 H 0.15 0.16 8.06 -52.49 -0.42 -0.26 16 36 H 0.11 -0.25 7.91 -51.93 -0.41 -0.66 16 37 H 0.08 0.01 8.09 -51.93 -0.42 -0.41 16 LS Contribution 312.98 15.07 4.72 4.72 Total: 0.00 -6.82 312.98 -7.44 -14.26 By element: Atomic # 1 Polarization: -2.13 SS G_CDS: -3.90 Total: -6.03 kcal Atomic # 6 Polarization: 1.22 SS G_CDS: -1.65 Total: -0.43 kcal Atomic # 7 Polarization: -2.53 SS G_CDS: -0.30 Total: -2.84 kcal Atomic # 8 Polarization: -1.85 SS G_CDS: -1.28 Total: -3.13 kcal Atomic # 9 Polarization: -0.57 SS G_CDS: 0.04 Total: -0.53 kcal Atomic # 14 Polarization: -0.95 SS G_CDS: -5.07 Total: -6.02 kcal Total LS contribution 4.72 Total: 4.72 kcal Total: -6.82 -7.44 -14.26 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_18341584_17656566.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -68.486 kcal (2) G-P(sol) polarization free energy of solvation -6.817 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -75.302 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.444 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.260 kcal (6) G-S(sol) free energy of system = (1) + (5) -82.746 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.38 seconds