Wall clock time and date at job start Mon Mar 8 2021 07:48:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42908 * 1 3 3 C 1.42901 * 113.99747 * 2 1 4 4 H 1.08994 * 112.84952 * 18.80373 * 3 2 1 5 5 C 1.53780 * 113.61385 * 150.00022 * 3 2 1 6 6 C 1.53787 * 87.08129 * 89.11109 * 5 3 2 7 7 C 1.53001 * 113.60911 * 139.98194 * 6 5 3 8 8 O 1.42902 * 109.46914 * 176.26746 * 7 6 5 9 9 N 1.46491 * 113.61725 * 270.79959 * 6 5 3 10 10 C 1.39145 * 120.00296 * 293.60202 * 9 6 5 11 11 N 1.32343 * 119.71712 * 5.09864 * 10 9 6 12 12 C 1.32004 * 121.64515 * 179.75557 * 11 10 9 13 13 C 1.37980 * 120.90329 * 0.51782 * 12 11 10 14 14 C 1.50707 * 120.32834 * 179.76596 * 13 12 11 15 15 O 1.42901 * 109.46915 * 119.97874 * 14 13 12 16 16 Si 1.86305 * 109.47007 * 359.97438 * 14 13 12 17 17 C 1.38904 * 119.34866 * 359.74837 * 13 12 11 18 18 C 1.38443 * 118.48308 * 359.97438 * 17 13 12 19 19 F 1.35099 * 120.47265 * 179.97438 * 18 17 13 20 20 C 1.53785 * 113.60990 * 247.49681 * 3 2 1 21 21 H 1.09000 * 109.46715 * 180.02562 * 1 2 3 22 22 H 1.08996 * 109.47036 * 299.99708 * 1 2 3 23 23 H 1.08997 * 109.46672 * 60.00429 * 1 2 3 24 24 H 1.09006 * 113.61264 * 334.56797 * 5 3 2 25 25 H 1.08992 * 113.61567 * 203.66565 * 5 3 2 26 26 H 1.08994 * 109.47367 * 56.26156 * 7 6 5 27 27 H 1.08998 * 109.46960 * 296.25908 * 7 6 5 28 28 H 0.96695 * 114.00131 * 180.02562 * 8 7 6 29 29 H 0.97008 * 120.00123 * 113.60004 * 9 6 5 30 30 H 1.08003 * 119.54874 * 180.26336 * 12 11 10 31 31 H 1.08994 * 109.47339 * 239.97829 * 14 13 12 32 32 H 0.96705 * 113.99904 * 299.99895 * 15 14 13 33 33 H 1.48497 * 109.99839 * 58.67576 * 16 14 13 34 34 H 1.48499 * 109.99720 * 180.02562 * 16 14 13 35 35 H 1.07999 * 120.75742 * 179.97438 * 17 13 12 36 36 H 1.09000 * 113.61007 * 156.33868 * 20 3 2 37 37 H 1.08991 * 113.61469 * 25.43198 * 20 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3138 2.0788 0.3237 5 6 3.3756 1.3720 0.7045 6 6 4.0062 1.0330 -0.6565 7 6 5.2910 1.8112 -0.9474 8 8 5.8463 1.3675 -2.1871 9 7 4.1455 -0.4053 -0.8969 10 6 5.0195 -1.1592 -0.1197 11 7 5.6458 -0.5932 0.8995 12 6 6.4791 -1.2736 1.6645 13 6 6.7369 -2.6069 1.4206 14 6 7.6947 -3.3699 2.2991 15 8 7.0102 -4.4646 2.9117 16 14 8.3626 -2.2378 3.6194 17 6 6.1048 -3.2392 0.3576 18 6 5.2317 -2.5023 -0.4243 19 9 4.5956 -3.0768 -1.4685 20 6 2.7534 1.6488 -1.3018 21 1 -0.3633 -1.0277 0.0005 22 1 -0.3633 0.5138 0.8900 23 1 -0.3632 0.5138 -0.8900 24 1 3.5170 0.5958 1.4567 25 1 3.6311 2.3670 1.0685 26 1 6.0090 1.6398 -0.1456 27 1 5.0646 2.8755 -1.0111 28 1 6.6647 1.8186 -2.4354 29 1 3.6284 -0.8323 -1.5979 30 1 6.9688 -0.7787 2.4902 31 1 8.5187 -3.7491 1.6948 32 1 6.2630 -4.2006 3.4660 33 1 7.2462 -1.6890 4.4303 34 1 9.3089 -2.9782 4.4921 35 1 6.2903 -4.2819 0.1458 36 1 2.8389 2.7197 -1.4863 37 1 2.3927 1.0963 -2.1693 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_18341584_17656566.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:48:47 Heat of formation + Delta-G solvation = -84.410357 kcal Electronic energy + Delta-G solvation = -23707.773680 eV Core-core repulsion = 19982.122622 eV Total energy + Delta-G solvation = -3725.651058 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 285.121 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -49.92478 -41.73525 -40.72759 -38.27697 -37.80735 -36.63779 -34.92739 -33.14566 -31.15315 -28.85952 -27.34290 -27.00011 -26.30298 -24.96880 -23.32107 -22.70605 -20.48022 -19.38036 -18.43690 -18.21741 -18.04572 -17.57886 -17.54919 -16.96468 -16.64626 -16.37899 -16.13149 -15.97280 -15.89207 -15.47098 -15.29556 -14.80623 -14.47212 -14.29142 -14.02800 -13.63387 -13.47245 -13.28813 -13.10517 -12.72899 -12.62469 -12.27443 -12.09131 -12.02534 -11.57152 -11.04246 -10.88559 -10.74220 -10.57088 -10.47669 -10.41805 -8.66469 -4.88950 -0.02465 0.16340 1.33042 1.64238 1.97466 2.00136 2.59262 2.72067 3.07503 3.15784 3.32592 3.44029 3.51887 3.63090 3.65236 3.80457 3.88133 4.03982 4.16306 4.37542 4.44113 4.48556 4.50342 4.55032 4.59506 4.69208 4.73498 4.76724 4.79161 4.82809 4.89922 5.01454 5.09585 5.12621 5.43611 6.08710 6.20883 6.29542 6.50194 6.90157 7.00848 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.390 6.390 3 C 0.056 3.944 4 H 0.096 0.904 5 C -0.130 4.130 6 C 0.165 3.835 7 C 0.077 3.923 8 O -0.588 6.588 9 N -0.676 5.676 10 C 0.397 3.603 11 N -0.517 5.517 12 C 0.148 3.852 13 C -0.210 4.210 14 C -0.070 4.070 15 O -0.550 6.550 16 Si 0.770 3.230 17 C -0.041 4.041 18 C -0.048 4.048 19 F -0.146 7.146 20 C -0.149 4.149 21 H 0.085 0.915 22 H 0.051 0.949 23 H 0.051 0.949 24 H 0.067 0.933 25 H 0.125 0.875 26 H 0.057 0.943 27 H 0.075 0.925 28 H 0.391 0.609 29 H 0.410 0.590 30 H 0.185 0.815 31 H 0.126 0.874 32 H 0.386 0.614 33 H -0.276 1.276 34 H -0.300 1.300 35 H 0.150 0.850 36 H 0.127 0.873 37 H 0.069 0.931 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.219 6.658 0.902 6.723 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.309 6.309 3 C -0.002 4.002 4 H 0.114 0.886 5 C -0.169 4.169 6 C 0.078 3.922 7 C -0.002 4.002 8 O -0.395 6.395 9 N -0.305 5.305 10 C 0.159 3.841 11 N -0.234 5.234 12 C -0.010 4.010 13 C -0.215 4.215 14 C -0.179 4.179 15 O -0.358 6.358 16 Si 0.674 3.326 17 C -0.067 4.067 18 C -0.074 4.074 19 F -0.126 7.126 20 C -0.187 4.187 21 H 0.104 0.896 22 H 0.069 0.931 23 H 0.069 0.931 24 H 0.086 0.914 25 H 0.143 0.857 26 H 0.076 0.924 27 H 0.093 0.907 28 H 0.240 0.760 29 H 0.247 0.753 30 H 0.201 0.799 31 H 0.144 0.856 32 H 0.235 0.765 33 H -0.202 1.202 34 H -0.228 1.228 35 H 0.167 0.833 36 H 0.145 0.855 37 H 0.088 0.912 Dipole moment (debyes) X Y Z Total from point charges 0.090 6.985 1.575 7.161 hybrid contribution -0.991 -1.658 -0.512 1.998 sum -0.900 5.327 1.063 5.507 Atomic orbital electron populations 1.22923 0.79869 1.03269 1.00856 1.87905 1.20871 1.27523 1.94633 1.23229 0.95071 0.85359 0.96511 0.88642 1.23555 0.93349 1.03838 0.96113 1.21301 0.93912 0.79792 0.97230 1.22552 0.94514 0.97045 0.86089 1.86462 1.45398 1.67641 1.40044 1.44009 1.43231 1.06941 1.36353 1.18490 0.89676 0.86428 0.89547 1.67414 1.12236 1.37917 1.05849 1.22724 0.91567 0.90468 0.96226 1.20865 1.04592 0.96014 1.00037 1.25091 0.96214 0.94721 1.01835 1.86577 1.49214 1.33165 1.66846 0.94176 0.79798 0.81495 0.77132 1.21370 0.92277 1.00757 0.92318 1.18225 1.03984 0.92466 0.92756 1.91441 1.80846 1.84665 1.55608 1.23857 0.94139 1.02907 0.97810 0.89597 0.93060 0.93055 0.91379 0.85655 0.92447 0.90742 0.75972 0.75314 0.79906 0.85599 0.76508 1.20224 1.22822 0.83270 0.85472 0.91206 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.85 113.37 1.23 1.21 16 2 O -0.39 -1.62 10.13 -148.98 -1.51 -3.13 16 3 C 0.06 -0.04 4.38 31.12 0.14 0.09 16 4 H 0.10 -0.43 7.87 -2.39 -0.02 -0.45 16 5 C -0.13 0.07 6.76 31.12 0.21 0.28 16 6 C 0.16 0.17 0.81 4.14 0.00 0.17 16 7 C 0.08 -0.07 6.28 71.98 0.45 0.39 16 8 O -0.59 -1.23 13.34 -148.98 -1.99 -3.22 16 9 N -0.68 -3.81 4.48 -302.28 -1.35 -5.16 16 10 C 0.40 2.84 7.06 133.08 0.94 3.78 16 11 N -0.52 -2.30 7.44 -193.03 -1.44 -3.73 16 12 C 0.15 0.10 9.84 84.61 0.83 0.93 16 13 C -0.21 -0.25 5.40 -19.76 -0.11 -0.36 16 14 C -0.07 0.08 2.84 71.24 0.20 0.28 16 15 O -0.55 -1.34 12.78 -148.98 -1.90 -3.24 16 16 Si 0.77 -2.70 29.82 68.60 2.05 -0.65 16 17 C -0.04 -0.20 9.75 22.48 0.22 0.02 16 18 C -0.05 -0.40 7.35 22.59 0.17 -0.23 16 19 F -0.15 -1.58 16.66 44.97 0.75 -0.83 16 20 C -0.15 0.27 7.19 31.12 0.22 0.49 16 21 H 0.09 -0.10 8.14 -2.39 -0.02 -0.12 16 22 H 0.05 -0.14 8.14 -2.39 -0.02 -0.16 16 23 H 0.05 -0.14 8.14 -2.39 -0.02 -0.16 16 24 H 0.07 0.31 7.23 -2.38 -0.02 0.30 16 25 H 0.13 -0.71 8.10 -2.39 -0.02 -0.73 16 26 H 0.06 0.01 7.25 -2.39 -0.02 -0.01 16 27 H 0.07 -0.42 7.87 -2.39 -0.02 -0.44 16 28 H 0.39 -2.20 9.12 -74.06 -0.68 -2.88 16 29 H 0.41 2.86 8.14 -92.70 -0.76 2.11 16 30 H 0.18 -0.93 4.88 -2.91 -0.01 -0.94 16 31 H 0.13 -0.34 7.96 -2.39 -0.02 -0.36 16 32 H 0.39 -1.11 8.70 -74.05 -0.64 -1.76 16 33 H -0.28 0.06 7.11 99.48 0.71 0.76 16 34 H -0.30 -1.30 7.11 99.48 0.71 -0.59 16 35 H 0.15 0.52 8.06 -2.91 -0.02 0.49 16 36 H 0.13 -0.82 7.91 -2.39 -0.02 -0.84 16 37 H 0.07 0.05 8.09 -2.39 -0.02 0.04 16 Total: 0.00 -16.84 312.98 -1.79 -18.63 By element: Atomic # 1 Polarization: -4.83 SS G_CDS: -0.91 Total: -5.73 kcal Atomic # 6 Polarization: 2.56 SS G_CDS: 4.51 Total: 7.07 kcal Atomic # 7 Polarization: -6.10 SS G_CDS: -2.79 Total: -8.90 kcal Atomic # 8 Polarization: -4.19 SS G_CDS: -5.40 Total: -9.59 kcal Atomic # 9 Polarization: -1.58 SS G_CDS: 0.75 Total: -0.83 kcal Atomic # 14 Polarization: -2.70 SS G_CDS: 2.05 Total: -0.65 kcal Total: -16.84 -1.79 -18.63 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_18341584_17656566.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -65.778 kcal (2) G-P(sol) polarization free energy of solvation -16.838 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -82.616 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.794 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.632 kcal (6) G-S(sol) free energy of system = (1) + (5) -84.410 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds