Wall clock time and date at job start Mon Mar 8 2021 06:50:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00901 * 1 3 3 H 1.00899 * 109.47437 * 1 2 4 4 H 1.00901 * 109.46543 * 240.00667 * 1 2 3 5 5 C 1.46894 * 109.47443 * 120.00895 * 1 2 3 6 6 H 1.09002 * 109.47252 * 299.99758 * 5 1 2 7 7 C 1.53003 * 109.47285 * 59.99323 * 5 1 2 8 8 C 1.53002 * 109.47494 * 179.97438 * 7 5 1 9 9 C 1.52997 * 109.46984 * 300.00606 * 8 7 5 10 10 H 1.09003 * 109.47659 * 299.99437 * 9 8 7 11 11 N 1.46506 * 109.47390 * 179.97438 * 9 8 7 12 12 C 1.38552 * 120.00240 * 154.99288 * 11 9 8 13 13 C 1.39727 * 120.47058 * 0.02562 * 12 11 9 14 14 C 1.38252 * 118.55175 * 180.02562 * 13 12 11 15 15 N 1.32345 * 119.32798 * 359.97438 * 14 13 12 16 16 C 1.32854 * 120.90302 * 359.97438 * 15 14 13 17 17 C 1.47551 * 119.21077 * 179.97438 * 16 15 14 18 18 C 1.36082 * 125.95012 * 0.02562 * 17 16 15 19 19 C 1.40743 * 106.73649 * 179.72678 * 18 17 16 20 20 C 1.34868 * 107.05446 * 0.40332 * 19 18 17 21 21 C 1.50699 * 125.65568 * 179.85079 * 20 19 18 22 22 O 1.42892 * 109.47249 * 299.72264 * 21 20 19 23 23 Si 1.86298 * 109.47032 * 179.71650 * 21 20 19 24 24 O 1.34158 * 108.69213 * 359.59244 * 20 19 18 25 25 N 1.32816 * 120.46660 * 180.27810 * 12 11 9 26 26 C 1.52998 * 109.47353 * 59.99693 * 9 8 7 27 27 C 1.52996 * 109.47151 * 299.99820 * 26 9 8 28 28 H 1.09008 * 109.46854 * 60.00414 * 7 5 1 29 29 H 1.08997 * 109.47208 * 300.00466 * 7 5 1 30 30 H 1.08996 * 109.47457 * 180.02562 * 8 7 5 31 31 H 1.09002 * 109.46473 * 59.99989 * 8 7 5 32 32 H 0.97005 * 119.99230 * 335.00377 * 11 9 8 33 33 H 1.07999 * 120.72662 * 359.97438 * 13 12 11 34 34 H 1.08001 * 120.33319 * 180.02562 * 14 13 12 35 35 H 1.08003 * 126.62871 * 359.97438 * 18 17 16 36 36 H 1.07997 * 126.47799 * 180.30170 * 19 18 17 37 37 H 1.09004 * 109.46453 * 59.72332 * 21 20 19 38 38 H 0.96703 * 114.00176 * 299.99748 * 22 21 20 39 39 H 1.48506 * 109.99834 * 58.68765 * 23 21 20 40 40 H 1.48502 * 110.00011 * 180.02562 * 23 21 20 41 41 H 1.08996 * 109.47350 * 60.00077 * 26 9 8 42 42 H 1.09003 * 109.47261 * 180.02562 * 26 9 8 43 43 H 1.09002 * 109.47425 * 299.99974 * 27 26 9 44 44 H 1.08996 * 109.47282 * 180.02562 * 27 26 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0090 0.0000 0.0000 3 1 -0.3364 0.9513 0.0000 4 1 -0.3362 -0.4756 0.8239 5 6 -0.4897 -0.6926 -1.1992 6 1 -0.1265 -0.1789 -2.0894 7 6 0.0204 -2.1351 -1.1992 8 6 -0.4902 -2.8568 -2.4479 9 6 -2.0202 -2.8568 -2.4472 10 1 -2.3832 -3.3704 -1.5569 11 7 -2.5092 -3.5473 -3.6432 12 6 -3.7654 -4.1319 -3.6408 13 6 -4.5742 -4.0683 -2.5033 14 6 -5.8204 -4.6657 -2.5443 15 7 -6.2103 -5.2764 -3.6518 16 6 -5.4217 -5.3213 -4.7201 17 6 -5.8939 -6.0126 -5.9351 18 6 -7.0959 -6.6325 -6.0855 19 6 -7.1259 -7.1464 -7.3954 20 6 -5.9495 -6.8270 -7.9726 21 6 -5.5370 -7.1784 -9.3787 22 8 -5.5304 -8.5990 -9.5323 23 14 -3.8299 -6.5100 -9.7104 24 8 -5.2098 -6.1397 -7.0893 25 7 -4.2156 -4.7649 -4.7181 26 6 -2.5302 -1.4143 -2.4474 27 6 -2.0197 -0.6927 -1.1986 28 1 -0.3430 -2.6489 -0.3091 29 1 1.1103 -2.1351 -1.1992 30 1 -0.1272 -3.8845 -2.4477 31 1 -0.1273 -2.3431 -3.3382 32 1 -1.9533 -3.5952 -4.4368 33 1 -4.2332 -3.5643 -1.6111 34 1 -6.4693 -4.6337 -1.6816 35 1 -7.8777 -6.7109 -5.3444 36 1 -7.9368 -7.6947 -7.8516 37 1 -6.2424 -6.7398 -10.0846 38 1 -4.9237 -9.0566 -8.9342 39 1 -2.8644 -7.0759 -8.7343 40 1 -3.4116 -6.8493 -11.0943 41 1 -2.1674 -0.9007 -3.3376 42 1 -3.6202 -1.4143 -2.4464 43 1 -2.3826 -1.2063 -0.3082 44 1 -2.3834 0.3347 -1.1984 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273584_18081478_17085348.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:50:33 Heat of formation + Delta-G solvation = 159.144774 kcal Electronic energy + Delta-G solvation = -26234.958338 eV Core-core repulsion = 22467.743570 eV Total energy + Delta-G solvation = -3767.214768 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 318.160 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -44.30700 -43.66812 -42.70164 -40.24047 -38.67727 -37.28847 -35.14363 -34.78227 -34.16283 -33.61489 -31.65095 -30.82980 -28.08319 -26.39774 -26.03800 -25.60150 -24.70636 -23.54072 -23.24969 -22.11679 -21.51706 -21.30498 -20.29217 -20.07935 -19.78516 -19.13524 -18.22016 -18.15330 -18.07965 -17.54812 -17.44917 -17.05562 -16.91463 -16.79799 -16.29919 -16.17736 -15.85711 -15.57891 -15.46782 -14.93768 -14.87186 -14.67377 -14.54054 -14.49002 -14.35390 -14.28025 -14.01069 -13.50945 -13.45056 -13.16361 -12.71229 -12.57032 -12.24405 -11.53159 -11.30467 -11.13960 -10.52983 -9.88811 -5.52589 -1.35332 -1.30957 -0.57970 0.12964 0.50274 0.56184 0.57030 0.62190 0.73305 0.76637 0.97509 1.12583 1.36488 1.38092 1.46814 1.54904 1.82041 1.88447 2.02012 2.11057 2.14010 2.19195 2.24814 2.39661 2.48984 2.51979 2.62086 2.65221 2.72801 2.74843 3.02182 3.11982 3.13081 3.15968 3.30553 3.37766 3.42805 3.46443 3.66418 3.79709 4.01128 4.16300 4.20417 4.40894 4.64229 4.82228 5.04949 5.33774 5.42379 5.70675 6.28523 Molecular weight = 318.16amu Principal moments of inertia in cm(-1) A = 0.019980 B = 0.002904 C = 0.002612 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1401.080506 B = 9639.706573 C =10717.540136 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.637 5.637 2 H 0.438 0.562 3 H 0.438 0.562 4 H 0.434 0.566 5 C 0.023 3.977 6 H 0.145 0.855 7 C -0.137 4.137 8 C -0.127 4.127 9 C 0.150 3.850 10 H 0.091 0.909 11 N -0.712 5.712 12 C 0.443 3.557 13 C -0.301 4.301 14 C 0.191 3.809 15 N -0.536 5.536 16 C 0.448 3.552 17 C 0.020 3.980 18 C -0.124 4.124 19 C -0.183 4.183 20 C -0.027 4.027 21 C -0.037 4.037 22 O -0.517 6.517 23 Si 0.701 3.299 24 O -0.148 6.148 25 N -0.562 5.562 26 C -0.138 4.138 27 C -0.140 4.140 28 H 0.092 0.908 29 H 0.096 0.904 30 H 0.096 0.904 31 H 0.085 0.915 32 H 0.412 0.588 33 H 0.142 0.858 34 H 0.176 0.824 35 H 0.165 0.835 36 H 0.161 0.839 37 H 0.141 0.859 38 H 0.381 0.619 39 H -0.257 1.257 40 H -0.247 1.247 41 H 0.083 0.917 42 H 0.091 0.909 43 H 0.091 0.909 44 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 19.046 23.732 24.411 39.011 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.034 5.034 2 H 0.266 0.734 3 H 0.267 0.733 4 H 0.262 0.738 5 C -0.081 4.081 6 H 0.162 0.838 7 C -0.176 4.176 8 C -0.166 4.166 9 C 0.044 3.956 10 H 0.109 0.891 11 N -0.345 5.345 12 C 0.199 3.801 13 C -0.329 4.329 14 C 0.028 3.972 15 N -0.255 5.255 16 C 0.183 3.817 17 C -0.032 4.032 18 C -0.146 4.146 19 C -0.202 4.202 20 C -0.079 4.079 21 C -0.147 4.147 22 O -0.324 6.324 23 Si 0.600 3.400 24 O -0.043 6.043 25 N -0.285 5.285 26 C -0.178 4.178 27 C -0.178 4.178 28 H 0.111 0.889 29 H 0.115 0.885 30 H 0.114 0.886 31 H 0.104 0.896 32 H 0.249 0.751 33 H 0.160 0.840 34 H 0.193 0.807 35 H 0.183 0.817 36 H 0.178 0.822 37 H 0.158 0.842 38 H 0.230 0.770 39 H -0.181 1.181 40 H -0.171 1.171 41 H 0.102 0.898 42 H 0.110 0.890 43 H 0.110 0.890 44 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges 19.400 23.290 22.849 37.959 hybrid contribution 0.392 -0.507 1.368 1.511 sum 19.793 22.783 24.217 38.695 Atomic orbital electron populations 1.42640 1.21259 1.20733 1.18760 0.73368 0.73337 0.73759 1.23585 0.99597 0.97462 0.87408 0.83777 1.22020 1.02938 0.90809 1.01785 1.21749 0.94163 1.03232 0.97441 1.21062 0.93506 0.91994 0.89066 0.89060 1.44330 1.14897 1.58665 1.16627 1.18336 0.85966 0.86909 0.88897 1.22168 0.98447 1.12202 1.00049 1.22974 0.92588 0.86875 0.94747 1.68266 1.35633 1.21576 1.00020 1.19243 0.84324 0.88939 0.89226 1.18991 0.92680 1.06663 0.84857 1.22032 0.96847 0.98145 0.97594 1.21700 0.98804 1.05010 0.94726 1.23138 0.92167 0.99115 0.93509 1.24405 1.14933 0.85656 0.89663 1.86691 1.66568 1.15988 1.63108 0.94485 0.73484 0.91310 0.80718 1.83989 1.41961 1.58589 1.19755 1.67992 1.16524 1.15712 1.28251 1.22079 1.03455 0.95315 0.96935 1.22057 0.89422 1.04247 1.02072 0.88897 0.88500 0.88593 0.89608 0.75057 0.84026 0.80724 0.81740 0.82170 0.84167 0.77047 1.18086 1.17073 0.89821 0.89019 0.89019 0.88699 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.64 24.75 4.15 -4.67 -0.02 24.73 16 2 H 0.44 -17.63 8.96 -39.29 -0.35 -17.99 16 3 H 0.44 -17.61 8.96 -39.29 -0.35 -17.97 16 4 H 0.43 -17.33 8.90 -39.29 -0.35 -17.68 16 5 C 0.02 -0.77 3.03 -67.72 -0.20 -0.98 16 6 H 0.14 -4.75 8.14 -51.93 -0.42 -5.18 16 7 C -0.14 4.04 5.43 -26.73 -0.15 3.89 16 8 C -0.13 3.06 5.39 -26.73 -0.14 2.92 16 9 C 0.15 -3.23 2.15 -67.93 -0.15 -3.37 16 10 H 0.09 -1.98 6.51 -51.93 -0.34 -2.32 16 11 N -0.71 11.36 5.23 -53.79 -0.28 11.08 16 12 C 0.44 -5.04 7.68 -154.88 -1.19 -6.23 16 13 C -0.30 3.94 8.93 -39.02 -0.35 3.59 16 14 C 0.19 -2.04 11.28 -17.33 -0.20 -2.23 16 15 N -0.54 3.58 10.08 -11.34 -0.11 3.47 16 16 C 0.45 -2.48 7.58 -156.86 -1.19 -3.67 16 17 C 0.02 -0.09 7.15 -36.56 -0.26 -0.35 16 18 C -0.12 0.65 10.56 -39.41 -0.42 0.24 16 19 C -0.18 1.00 10.77 -39.83 -0.43 0.57 16 20 C -0.03 0.15 6.22 -35.50 -0.22 -0.07 16 21 C -0.04 0.25 2.98 36.01 0.11 0.36 16 22 O -0.52 2.84 12.87 -35.23 -0.45 2.39 16 23 Si 0.70 -5.03 32.10 -169.99 -5.46 -10.48 16 24 O -0.15 0.68 9.04 4.82 0.04 0.73 16 25 N -0.56 3.95 10.40 -10.50 -0.11 3.84 16 26 C -0.14 3.23 5.46 -26.73 -0.15 3.08 16 27 C -0.14 4.07 5.43 -26.73 -0.15 3.93 16 28 H 0.09 -2.76 8.14 -51.92 -0.42 -3.18 16 29 H 0.10 -2.90 8.14 -51.93 -0.42 -3.32 16 30 H 0.10 -2.07 8.14 -51.93 -0.42 -2.49 16 31 H 0.09 -2.04 8.14 -51.93 -0.42 -2.46 16 32 H 0.41 -6.43 8.73 -40.82 -0.36 -6.79 16 33 H 0.14 -2.46 6.28 -52.49 -0.33 -2.79 16 34 H 0.18 -2.42 8.06 -52.49 -0.42 -2.84 16 35 H 0.17 -1.06 8.06 -52.48 -0.42 -1.48 16 36 H 0.16 -1.06 8.06 -52.49 -0.42 -1.48 16 37 H 0.14 -1.16 7.96 -51.93 -0.41 -1.58 16 38 H 0.38 -3.14 8.70 45.56 0.40 -2.75 16 39 H -0.26 1.18 7.11 56.52 0.40 1.58 16 40 H -0.25 1.10 7.11 56.52 0.40 1.51 16 41 H 0.08 -1.88 8.14 -51.93 -0.42 -2.30 16 42 H 0.09 -1.87 7.75 -51.93 -0.40 -2.27 16 43 H 0.09 -2.72 8.14 -51.93 -0.42 -3.14 16 44 H 0.09 -2.80 8.14 -51.93 -0.42 -3.22 16 LS Contribution 360.19 15.07 5.43 5.43 Total: 1.00 -44.87 360.19 -12.38 -57.25 By element: Atomic # 1 Polarization: -93.77 SS G_CDS: -6.35 Total: -100.11 kcal Atomic # 6 Polarization: 6.76 SS G_CDS: -5.07 Total: 1.68 kcal Atomic # 7 Polarization: 43.65 SS G_CDS: -0.52 Total: 43.12 kcal Atomic # 8 Polarization: 3.52 SS G_CDS: -0.41 Total: 3.11 kcal Atomic # 14 Polarization: -5.03 SS G_CDS: -5.46 Total: -10.48 kcal Total LS contribution 5.43 Total: 5.43 kcal Total: -44.87 -12.38 -57.25 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273584_18081478_17085348.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 216.393 kcal (2) G-P(sol) polarization free energy of solvation -44.865 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 171.527 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.383 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -57.248 kcal (6) G-S(sol) free energy of system = (1) + (5) 159.145 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds